RNA–Protein interactions for RNA: ENST00000588629.1

ATP6V0A1-218, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2

Gene ATP6V0A1, Length 1,797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-218ENST00000588629 CHD1O14646 1710 aa31.15■■■□□ 2.58
ATP6V0A1-218ENST00000588629 RANGAP1P46060 587 aaPredicted RBP31.13■■■□□ 2.57
ATP6V0A1-218ENST00000588629 CEP170Q5SW79 1584 aa31.12■■■□□ 2.57
ATP6V0A1-218ENST00000588629 CLIP1P30622 1438 aa31.12■■■□□ 2.57
ATP6V0A1-218ENST00000588629 NUP160Q12769 1436 aa31.11■■■□□ 2.57
ATP6V0A1-218ENST00000588629 KIAA0586Q9BVV6 1533 aa31.05■■■□□ 2.56
ATP6V0A1-218ENST00000588629 IQGAP2Q13576 1575 aa31.05■■■□□ 2.56
ATP6V0A1-218ENST00000588629 ARHGAP35Q9NRY4 1499 aa30.99■■■□□ 2.55
ATP6V0A1-218ENST00000588629 ARAP1Q96P48 1450 aa30.91■■■□□ 2.54
ATP6V0A1-218ENST00000588629 EFCAB5A4FU69 1503 aa30.9■■■□□ 2.54
ATP6V0A1-218ENST00000588629 UGGT2Q9NYU1 1516 aa30.9■■■□□ 2.54
ATP6V0A1-218ENST00000588629 SAMD9Q5K651 1589 aa30.89■■■□□ 2.54
ATP6V0A1-218ENST00000588629 P3H3Q8IVL6 736 aa30.83■■■□□ 2.53
ATP6V0A1-218ENST00000588629 CLASP1Q7Z460 1538 aa30.82■■■□□ 2.52
ATP6V0A1-218ENST00000588629 JPH4Q96JJ6 628 aa30.82■■■□□ 2.52
ATP6V0A1-218ENST00000588629 FHOD3Q2V2M9 1422 aa30.8■■■□□ 2.52
ATP6V0A1-218ENST00000588629 DISP1Q96F81 1524 aa30.78■■■□□ 2.52
ATP6V0A1-218ENST00000588629 VPS8Q8N3P4 1428 aa30.78■■■□□ 2.52
ATP6V0A1-218ENST00000588629 KIAA0556O60303 1618 aa30.75■■■□□ 2.51
ATP6V0A1-218ENST00000588629 SHROOM2Q13796 1616 aa30.74■■■□□ 2.51
ATP6V0A1-218ENST00000588629 OSCARQ8IYS5 282 aa30.71■■■□□ 2.51
ATP6V0A1-218ENST00000588629 PRG4Q92954 1404 aaPredicted RBP30.67■■■□□ 2.5
ATP6V0A1-218ENST00000588629 CARMIL2Q6F5E8 1435 aa30.66■■■□□ 2.5
ATP6V0A1-218ENST00000588629 FMN1Q68DA7 1419 aa30.62■■■□□ 2.49
ATP6V0A1-218ENST00000588629 ERCC6L2Q5T890 1561 aa30.57■■■□□ 2.48
ATP6V0A1-218ENST00000588629 PCF11O94913 1555 aaKnown RBP30.56■■■□□ 2.48
ATP6V0A1-218ENST00000588629 CASKIN1Q8WXD9 1431 aa30.51■■■□□ 2.47
ATP6V0A1-218ENST00000588629 TTBK1Q5TCY1 1321 aaPredicted RBP30.5■■■□□ 2.47
ATP6V0A1-218ENST00000588629 FYCO1Q9BQS8 1478 aa30.49■■■□□ 2.47
ATP6V0A1-218ENST00000588629 PTPRGP23470 1445 aa30.41■■■□□ 2.46
ATP6V0A1-218ENST00000588629 ATP1B4Q9UN42 357 aaPredicted RBP30.41■■■□□ 2.46
ATP6V0A1-218ENST00000588629 PLB1Q6P1J6 1458 aa30.39■■■□□ 2.46
ATP6V0A1-218ENST00000588629 APLP2Q06481 763 aa30.38■■■□□ 2.45
ATP6V0A1-218ENST00000588629 RAPGEF6Q8TEU7 1601 aa30.38■■■□□ 2.45
ATP6V0A1-218ENST00000588629 PPARGC1BQ86YN6 1023 aaKnown RBP30.38■■■□□ 2.45
ATP6V0A1-218ENST00000588629 HECW1Q76N89 1606 aa30.36■■■□□ 2.45
ATP6V0A1-218ENST00000588629 LRRIQ1Q96JM4 1722 aa30.35■■■□□ 2.45
ATP6V0A1-218ENST00000588629 ABCA8O94911 1581 aa30.34■■■□□ 2.45
ATP6V0A1-218ENST00000588629 MAP3K1Q13233 1512 aa30.33■■■□□ 2.45
ATP6V0A1-218ENST00000588629 TIAM1Q13009 1591 aa30.32■■■□□ 2.45
ATP6V0A1-218ENST00000588629 NUP153P49790 1475 aaKnown RBP30.31■■■□□ 2.44
ATP6V0A1-218ENST00000588629 CFAP43Q8NDM7 1665 aa30.3■■■□□ 2.44
ATP6V0A1-218ENST00000588629 EPRSP07814 1512 aaKnown RBP30.27■■■□□ 2.44
ATP6V0A1-218ENST00000588629 KANK4Q5T7N3 995 aaPredicted RBP30.26■■■□□ 2.44
ATP6V0A1-218ENST00000588629 CCDC18Q5T9S5 1454 aa30.25■■■□□ 2.43
ATP6V0A1-218ENST00000588629 UACAQ9BZF9 1416 aa30.25■■■□□ 2.43
ATP6V0A1-218ENST00000588629 ARHGEF11O15085 1522 aa30.24■■■□□ 2.43
ATP6V0A1-218ENST00000588629 CDK13Q14004 1512 aaKnown RBP30.23■■■□□ 2.43
ATP6V0A1-218ENST00000588629 ARID3CA6NKF2 412 aa30.22■■■□□ 2.43
ATP6V0A1-218ENST00000588629 LRRC9Q6ZRR7 1453 aa30.19■■■□□ 2.42
ATP6V0A1-218ENST00000588629 ABCC2Q92887 1545 aa30.18■■■□□ 2.42
ATP6V0A1-218ENST00000588629 UHRF1BP1LA0JNW5 1464 aa30.13■■■□□ 2.41
ATP6V0A1-218ENST00000588629 RIMBP3CA6NJZ7 1639 aa30.13■■■□□ 2.41
ATP6V0A1-218ENST00000588629 RIMBP3BA6NNM3 1639 aa30.13■■■□□ 2.41
ATP6V0A1-218ENST00000588629 RIMBP3Q9UFD9 1639 aa30.13■■■□□ 2.41
ATP6V0A1-218ENST00000588629 ATP10BO94823 1461 aa30.11■■■□□ 2.41
ATP6V0A1-218ENST00000588629 MAGI3Q5TCQ9 1506 aa30.11■■■□□ 2.41
ATP6V0A1-218ENST00000588629 ADCY10Q96PN6 1610 aa30.08■■■□□ 2.41
ATP6V0A1-218ENST00000588629 MTUS2Q5JR59 1369 aa30.07■■■□□ 2.4
ATP6V0A1-218ENST00000588629 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.07■■■□□ 2.4
ATP6V0A1-218ENST00000588629 HNRNPUL2Q1KMD3 747 aaKnown RBP30.07■■■□□ 2.4
ATP6V0A1-218ENST00000588629 EHBP1L1Q8N3D4 1523 aa30.05■■■□□ 2.4
ATP6V0A1-218ENST00000588629 KDM5BQ9UGL1 1544 aa30.02■■■□□ 2.4
ATP6V0A1-218ENST00000588629 CDK11AQ9UQ88 783 aaPredicted RBP29.99■■■□□ 2.39
ATP6V0A1-218ENST00000588629 ZCCHC11Q5TAX3 1644 aaKnown RBP29.98■■■□□ 2.39
ATP6V0A1-218ENST00000588629 TRIM26Q12899 539 aaPredicted RBP29.95■■■□□ 2.39
ATP6V0A1-218ENST00000588629 TROQ12816 1431 aaPredicted RBP29.94■■■□□ 2.38
ATP6V0A1-218ENST00000588629 CYB5RLQ6IPT4 315 aa29.93■■■□□ 2.38
ATP6V0A1-218ENST00000588629 SUPT6HQ7KZ85 1726 aaKnown RBP29.93■■■□□ 2.38
ATP6V0A1-218ENST00000588629 PLEKHD1A6NEE1 506 aa29.91■■■□□ 2.38
ATP6V0A1-218ENST00000588629 NCOA2Q15596 1464 aa29.91■■■□□ 2.38
ATP6V0A1-218ENST00000588629 PHLDB1Q86UU1 1377 aa29.9■■■□□ 2.38
ATP6V0A1-218ENST00000588629 KIF14Q15058 1648 aa29.84■■■□□ 2.37
ATP6V0A1-218ENST00000588629 PCGF6Q9BYE7 350 aa29.81■■■□□ 2.36
ATP6V0A1-218ENST00000588629 RRBP1Q9P2E9 1410 aaKnown RBP29.78■■■□□ 2.36
ATP6V0A1-218ENST00000588629 NPM1P06748 294 aaKnown RBP eCLIP29.77■■■□□ 2.36
ATP6V0A1-218ENST00000588629 MYOM3Q5VTT5 1437 aa29.76■■■□□ 2.35
ATP6V0A1-218ENST00000588629 WDR7Q9Y4E6 1490 aa29.74■■■□□ 2.35
ATP6V0A1-218ENST00000588629 ASXL2Q76L83 1435 aa29.74■■■□□ 2.35
ATP6V0A1-218ENST00000588629 ABCC10Q5T3U5 1492 aa29.73■■■□□ 2.35
ATP6V0A1-218ENST00000588629 CCNB3Q8WWL7 1395 aa29.71■■■□□ 2.35
ATP6V0A1-218ENST00000588629 FGD6Q6ZV73 1430 aa29.71■■■□□ 2.35
ATP6V0A1-218ENST00000588629 KCNH8Q96L42 1107 aa29.68■■■□□ 2.34
ATP6V0A1-218ENST00000588629 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.67■■■□□ 2.34
ATP6V0A1-218ENST00000588629 GPATCH8Q9UKJ3 1502 aaKnown RBP29.66■■■□□ 2.34
ATP6V0A1-218ENST00000588629 TTC37Q6PGP7 1564 aa29.65■■■□□ 2.34
ATP6V0A1-218ENST00000588629 MAPKBP1O60336 1514 aa29.64■■■□□ 2.33
ATP6V0A1-218ENST00000588629 DNAJC5Q9H3Z4 198 aa29.63■■■□□ 2.33
ATP6V0A1-218ENST00000588629 CDC42BPAQ5VT25 1732 aa29.62■■■□□ 2.33
ATP6V0A1-218ENST00000588629 ITSN2Q9NZM3 1697 aa29.62■■■□□ 2.33
ATP6V0A1-218ENST00000588629 MIA2Q96PC5 1412 aa29.62■■■□□ 2.33
ATP6V0A1-218ENST00000588629 PTPN23Q9H3S7 1636 aa29.59■■■□□ 2.33
ATP6V0A1-218ENST00000588629 FAM50AQ14320 339 aaKnown RBP29.57■■■□□ 2.32
ATP6V0A1-218ENST00000588629 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.56■■■□□ 2.32
ATP6V0A1-218ENST00000588629 TCOF1Q13428 1488 aaKnown RBP29.56■■■□□ 2.32
ATP6V0A1-218ENST00000588629 CFDP1Q9UEE9 299 aaPredicted RBP29.54■■■□□ 2.32
ATP6V0A1-218ENST00000588629 PREX2Q70Z35 1606 aa29.54■■■□□ 2.32
ATP6V0A1-218ENST00000588629 ABCA9Q8IUA7 1624 aa29.53■■■□□ 2.32
ATP6V0A1-218ENST00000588629 MYO5CQ9NQX4 1742 aa29.51■■■□□ 2.32
ATP6V0A1-218ENST00000588629 CDC42BPBQ9Y5S2 1711 aa29.51■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms