RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 HRCP23327 699 aa11.02□□□□□ -0.65
ZNF554-202ENST00000588534 ERICH3Q5RHP9 1530 aa11.02□□□□□ -0.65
ZNF554-202ENST00000588534 URB2Q14146 1524 aaKnown RBP11.01□□□□□ -0.65
ZNF554-202ENST00000588534 AQRO60306 1485 aaKnown RBP eCLIP11.01□□□□□ -0.65
ZNF554-202ENST00000588534 ACIN1Q9UKV3 1341 aaKnown RBP11□□□□□ -0.65
ZNF554-202ENST00000588534 RUSC2Q8N2Y8 1516 aa11□□□□□ -0.65
ZNF554-202ENST00000588534 BIVM-ERCC5R4GMW8 1640 aa11□□□□□ -0.65
ZNF554-202ENST00000588534 JPH4Q96JJ6 628 aa11□□□□□ -0.65
ZNF554-202ENST00000588534 OSCARQ8IYS5 282 aa10.99□□□□□ -0.65
ZNF554-202ENST00000588534 VPS8Q8N3P4 1428 aa10.99□□□□□ -0.65
ZNF554-202ENST00000588534 KIF21BO75037 1637 aa10.98□□□□□ -0.65
ZNF554-202ENST00000588534 PRXQ9BXM0 1461 aa10.97□□□□□ -0.65
ZNF554-202ENST00000588534 ARID3CA6NKF2 412 aa10.97□□□□□ -0.65
ZNF554-202ENST00000588534 MAGI1Q96QZ7 1491 aaPredicted RBP10.94□□□□□ -0.66
ZNF554-202ENST00000588534 ZNF777Q9ULD5 760 aaPredicted RBP10.91□□□□□ -0.66
ZNF554-202ENST00000588534 CUL7Q14999 1698 aa10.91□□□□□ -0.66
ZNF554-202ENST00000588534 TSPY4P0CV99 314 aa10.9□□□□□ -0.66
ZNF554-202ENST00000588534 TSPY10P0CW01 314 aa10.9□□□□□ -0.66
ZNF554-202ENST00000588534 SNAPC4Q5SXM2 1469 aa10.9□□□□□ -0.66
ZNF554-202ENST00000588534 WDR62O43379 1518 aa10.9□□□□□ -0.66
ZNF554-202ENST00000588534 SYNJ2O15056 1496 aa10.89□□□□□ -0.67
ZNF554-202ENST00000588534 PTPRGP23470 1445 aa10.89□□□□□ -0.67
ZNF554-202ENST00000588534 TRIM52Q96A61 297 aa10.88□□□□□ -0.67
ZNF554-202ENST00000588534 WDR97A6NE52 1622 aa10.87□□□□□ -0.67
ZNF554-202ENST00000588534 EFCAB5A4FU69 1503 aa10.87□□□□□ -0.67
ZNF554-202ENST00000588534 KIAA0586Q9BVV6 1533 aa10.87□□□□□ -0.67
ZNF554-202ENST00000588534 CFDP1Q9UEE9 299 aaPredicted RBP10.86□□□□□ -0.67
ZNF554-202ENST00000588534 FHOD3Q2V2M9 1422 aa10.85□□□□□ -0.67
ZNF554-202ENST00000588534 CCNB3Q8WWL7 1395 aa10.84□□□□□ -0.67
ZNF554-202ENST00000588534 KCNH8Q96L42 1107 aa10.84□□□□□ -0.67
ZNF554-202ENST00000588534 KIF21AQ7Z4S6 1674 aa10.83□□□□□ -0.68
ZNF554-202ENST00000588534 GRIN2AQ12879 1464 aa10.82□□□□□ -0.68
ZNF554-202ENST00000588534 CCDC18Q5T9S5 1454 aa10.8□□□□□ -0.68
ZNF554-202ENST00000588534 ZNF608Q9ULD9 1512 aaPredicted RBP10.8□□□□□ -0.68
ZNF554-202ENST00000588534 ARHGAP35Q9NRY4 1499 aa10.79□□□□□ -0.68
ZNF554-202ENST00000588534 RSPH4AQ5TD94 716 aa10.78□□□□□ -0.68
ZNF554-202ENST00000588534 PRG4Q92954 1404 aaPredicted RBP10.78□□□□□ -0.68
ZNF554-202ENST00000588534 CASKIN1Q8WXD9 1431 aa10.78□□□□□ -0.68
ZNF554-202ENST00000588534 EFCAB2Q5VUJ9 269 aa10.77□□□□□ -0.69
ZNF554-202ENST00000588534 IQGAP2Q13576 1575 aa10.76□□□□□ -0.69
ZNF554-202ENST00000588534 ESF1Q9H501 851 aaKnown RBP10.76□□□□□ -0.69
ZNF554-202ENST00000588534 FYCO1Q9BQS8 1478 aa10.74□□□□□ -0.69
ZNF554-202ENST00000588534 THOC2Q8NI27 1593 aaKnown RBP10.73□□□□□ -0.69
ZNF554-202ENST00000588534 KANK4Q5T7N3 995 aaPredicted RBP10.71□□□□□ -0.69
ZNF554-202ENST00000588534 PLPPR3Q6T4P5 718 aa10.71□□□□□ -0.69
ZNF554-202ENST00000588534 CHIC2Q9UKJ5 165 aa10.71□□□□□ -0.69
ZNF554-202ENST00000588534 ADAMTS12P58397 1594 aa10.7□□□□□ -0.7
ZNF554-202ENST00000588534 ARAP1Q96P48 1450 aa10.69□□□□□ -0.7
ZNF554-202ENST00000588534 ABCA5Q8WWZ7 1642 aa10.69□□□□□ -0.7
ZNF554-202ENST00000588534 EIF4G3O43432 1585 aaKnown RBP10.69□□□□□ -0.7
ZNF554-202ENST00000588534 CYB5RLQ6IPT4 315 aa10.68□□□□□ -0.7
ZNF554-202ENST00000588534 TARBP1Q13395 1621 aaKnown RBP10.68□□□□□ -0.7
ZNF554-202ENST00000588534 UACAQ9BZF9 1416 aa10.67□□□□□ -0.7
ZNF554-202ENST00000588534 CLSPNQ9HAW4 1339 aa10.66□□□□□ -0.7
ZNF554-202ENST00000588534 NUP160Q12769 1436 aa10.65□□□□□ -0.7
ZNF554-202ENST00000588534 NEUROD1Q13562 356 aa10.65□□□□□ -0.7
ZNF554-202ENST00000588534 HECW1Q76N89 1606 aa10.65□□□□□ -0.7
ZNF554-202ENST00000588534 RRP7BPQ9NSQ0 103 aa10.65□□□□□ -0.7
ZNF554-202ENST00000588534 MAP3K1Q13233 1512 aa10.64□□□□□ -0.71
ZNF554-202ENST00000588534 LRRC9Q6ZRR7 1453 aa10.64□□□□□ -0.71
ZNF554-202ENST00000588534 ANKRD30AQ9BXX3 1397 aa10.64□□□□□ -0.71
ZNF554-202ENST00000588534 UGGT2Q9NYU1 1516 aa10.63□□□□□ -0.71
ZNF554-202ENST00000588534 TRHP20396 242 aaPredicted RBP10.62□□□□□ -0.71
ZNF554-202ENST00000588534 SLC4A1APQ9BWU0 796 aaKnown RBP10.62□□□□□ -0.71
ZNF554-202ENST00000588534 TONSLQ96HA7 1378 aa10.62□□□□□ -0.71
ZNF554-202ENST00000588534 TROQ12816 1431 aaPredicted RBP10.61□□□□□ -0.71
ZNF554-202ENST00000588534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.61□□□□□ -0.71
ZNF554-202ENST00000588534 KANK1Q14678 1352 aa10.61□□□□□ -0.71
ZNF554-202ENST00000588534 PBRM1Q86U86 1689 aa10.6□□□□□ -0.71
ZNF554-202ENST00000588534 EHBP1L1Q8N3D4 1523 aa10.6□□□□□ -0.71
ZNF554-202ENST00000588534 MYOM3Q5VTT5 1437 aa10.6□□□□□ -0.71
ZNF554-202ENST00000588534 SETD5Q9C0A6 1442 aa10.6□□□□□ -0.71
ZNF554-202ENST00000588534 MIA2Q96PC5 1412 aa10.58□□□□□ -0.72
ZNF554-202ENST00000588534 EPRSP07814 1512 aaKnown RBP10.58□□□□□ -0.72
ZNF554-202ENST00000588534 SPAG9O60271 1321 aaKnown RBP10.58□□□□□ -0.72
ZNF554-202ENST00000588534 PLEKHH2Q8IVE3 1493 aa10.57□□□□□ -0.72
ZNF554-202ENST00000588534 TIMELESSQ9UNS1 1208 aa10.57□□□□□ -0.72
ZNF554-202ENST00000588534 STAG3Q9UJ98 1225 aa10.57□□□□□ -0.72
ZNF554-202ENST00000588534 NCOA2Q15596 1464 aa10.56□□□□□ -0.72
ZNF554-202ENST00000588534 CTTNBP2Q8WZ74 1663 aa10.56□□□□□ -0.72
ZNF554-202ENST00000588534 FGD6Q6ZV73 1430 aa10.56□□□□□ -0.72
ZNF554-202ENST00000588534 TIAM1Q13009 1591 aa10.56□□□□□ -0.72
ZNF554-202ENST00000588534 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.55□□□□□ -0.72
ZNF554-202ENST00000588534 RTN4Q9NQC3 1192 aaKnown RBP10.54□□□□□ -0.72
ZNF554-202ENST00000588534 FAM69CQ0P6D2 419 aa10.54□□□□□ -0.72
ZNF554-202ENST00000588534 ARID4BQ4LE39 1312 aaPredicted RBP10.53□□□□□ -0.72
ZNF554-202ENST00000588534 HNRNPMP52272 730 aaKnown RBP eCLIP10.53□□□□□ -0.72
ZNF554-202ENST00000588534 PLB1Q6P1J6 1458 aa10.52□□□□□ -0.73
ZNF554-202ENST00000588534 KIAA0556O60303 1618 aa10.52□□□□□ -0.73
ZNF554-202ENST00000588534 RRBP1Q9P2E9 1410 aaKnown RBP10.51□□□□□ -0.73
ZNF554-202ENST00000588534 ZNF326Q5BKZ1 582 aaKnown RBP10.51□□□□□ -0.73
ZNF554-202ENST00000588534 SCAF1Q9H7N4 1312 aaKnown RBP10.51□□□□□ -0.73
ZNF554-202ENST00000588534 PHLDB1Q86UU1 1377 aa10.51□□□□□ -0.73
ZNF554-202ENST00000588534 CHGAP10645 457 aaKnown RBP10.5□□□□□ -0.73
ZNF554-202ENST00000588534 PCF11O94913 1555 aaKnown RBP10.5□□□□□ -0.73
ZNF554-202ENST00000588534 SUPT6HQ7KZ85 1726 aaKnown RBP10.49□□□□□ -0.73
ZNF554-202ENST00000588534 BCANQ96GW7 911 aa10.48□□□□□ -0.73
ZNF554-202ENST00000588534 RAB3GAP2Q9H2M9 1393 aa10.48□□□□□ -0.73
ZNF554-202ENST00000588534 RAPGEF6Q8TEU7 1601 aa10.48□□□□□ -0.73
ZNF554-202ENST00000588534 ARHGAP5Q13017 1502 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms