RNA–Protein interactions for RNA: ENST00000588459.1

RPRD1A-206, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 4

Gene RPRD1A, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-206ENST00000588459 PRG4Q92954 1404 aaPredicted RBP23.51■■□□□ 1.35
RPRD1A-206ENST00000588459 JPH4Q96JJ6 628 aa23.5■■□□□ 1.35
RPRD1A-206ENST00000588459 TRHP20396 242 aaPredicted RBP23.46■■□□□ 1.35
RPRD1A-206ENST00000588459 KIAA0586Q9BVV6 1533 aa23.45■■□□□ 1.34
RPRD1A-206ENST00000588459 RAPGEF2Q9Y4G8 1499 aa23.36■■□□□ 1.33
RPRD1A-206ENST00000588459 IQGAP2Q13576 1575 aa23.32■■□□□ 1.32
RPRD1A-206ENST00000588459 ADCY10Q96PN6 1610 aa23.22■■□□□ 1.31
RPRD1A-206ENST00000588459 TTBK1Q5TCY1 1321 aaPredicted RBP23.22■■□□□ 1.31
RPRD1A-206ENST00000588459 CARMIL2Q6F5E8 1435 aa23.22■■□□□ 1.31
RPRD1A-206ENST00000588459 CTTNBP2Q8WZ74 1663 aa23.21■■□□□ 1.31
RPRD1A-206ENST00000588459 PRXQ9BXM0 1461 aa23.2■■□□□ 1.3
RPRD1A-206ENST00000588459 DISP1Q96F81 1524 aa23.18■■□□□ 1.3
RPRD1A-206ENST00000588459 PTPRGP23470 1445 aa23.17■■□□□ 1.3
RPRD1A-206ENST00000588459 TNIKQ9UKE5 1360 aa23.17■■□□□ 1.3
RPRD1A-206ENST00000588459 UGGT2Q9NYU1 1516 aa23.17■■□□□ 1.3
RPRD1A-206ENST00000588459 KIAA0556O60303 1618 aa23.12■■□□□ 1.29
RPRD1A-206ENST00000588459 NPM1P06748 294 aaKnown RBP eCLIP23.12■■□□□ 1.29
RPRD1A-206ENST00000588459 KIF13AQ9H1H9 1805 aa23.12■■□□□ 1.29
RPRD1A-206ENST00000588459 CSRNP3Q8WYN3 585 aa23.09■■□□□ 1.29
RPRD1A-206ENST00000588459 MAPKBP1O60336 1514 aa23.08■■□□□ 1.29
RPRD1A-206ENST00000588459 EEA1Q15075 1411 aa23.06■■□□□ 1.28
RPRD1A-206ENST00000588459 FAM9AQ8IZU1 332 aaPredicted RBP23.05■■□□□ 1.28
RPRD1A-206ENST00000588459 CHIC1Q5VXU3 224 aa23.02■■□□□ 1.28
RPRD1A-206ENST00000588459 ABCC10Q5T3U5 1492 aa23.02■■□□□ 1.28
RPRD1A-206ENST00000588459 ABCC2Q92887 1545 aa23.02■■□□□ 1.28
RPRD1A-206ENST00000588459 DIP2BQ9P265 1576 aa23.01■■□□□ 1.27
RPRD1A-206ENST00000588459 UACAQ9BZF9 1416 aa23.01■■□□□ 1.27
RPRD1A-206ENST00000588459 UHRF1BP1LA0JNW5 1464 aa22.99■■□□□ 1.27
RPRD1A-206ENST00000588459 GOLGA3Q08378 1498 aa22.99■■□□□ 1.27
RPRD1A-206ENST00000588459 FAM69CQ0P6D2 419 aa22.99■■□□□ 1.27
RPRD1A-206ENST00000588459 PLB1Q6P1J6 1458 aa22.92■■□□□ 1.26
RPRD1A-206ENST00000588459 ASXL2Q76L83 1435 aa22.91■■□□□ 1.26
RPRD1A-206ENST00000588459 ZCCHC11Q5TAX3 1644 aaKnown RBP22.91■■□□□ 1.26
RPRD1A-206ENST00000588459 KDM5BQ9UGL1 1544 aa22.9■■□□□ 1.26
RPRD1A-206ENST00000588459 KIF21BO75037 1637 aa22.9■■□□□ 1.26
RPRD1A-206ENST00000588459 TSPOAP1O95153 1857 aa22.88■■□□□ 1.25
RPRD1A-206ENST00000588459 P3H3Q8IVL6 736 aa22.88■■□□□ 1.25
RPRD1A-206ENST00000588459 ABCA8O94911 1581 aa22.87■■□□□ 1.25
RPRD1A-206ENST00000588459 SAMD9Q5K651 1589 aa22.87■■□□□ 1.25
RPRD1A-206ENST00000588459 RANGAP1P46060 587 aaPredicted RBP22.84■■□□□ 1.25
RPRD1A-206ENST00000588459 EHMT2Q96KQ7 1210 aa22.82■■□□□ 1.24
RPRD1A-206ENST00000588459 GLI2P10070 1586 aa22.79■■□□□ 1.24
RPRD1A-206ENST00000588459 EPRSP07814 1512 aaKnown RBP22.78■■□□□ 1.24
RPRD1A-206ENST00000588459 WDR7Q9Y4E6 1490 aa22.75■■□□□ 1.23
RPRD1A-206ENST00000588459 PPRC1Q5VV67 1664 aaKnown RBP22.74■■□□□ 1.23
RPRD1A-206ENST00000588459 FHOD3Q2V2M9 1422 aa22.74■■□□□ 1.23
RPRD1A-206ENST00000588459 ARID3CA6NKF2 412 aa22.73■■□□□ 1.23
RPRD1A-206ENST00000588459 KDM6BO15054 1643 aa22.72■■□□□ 1.23
RPRD1A-206ENST00000588459 RAPGEF6Q8TEU7 1601 aa22.71■■□□□ 1.23
RPRD1A-206ENST00000588459 MAP3K4Q9Y6R4 1608 aa22.71■■□□□ 1.23
RPRD1A-206ENST00000588459 UBTFP17480 764 aaKnown RBP22.7■■□□□ 1.22
RPRD1A-206ENST00000588459 EFCAB5A4FU69 1503 aa22.69■■□□□ 1.22
RPRD1A-206ENST00000588459 ATP10BO94823 1461 aa22.66■■□□□ 1.22
RPRD1A-206ENST00000588459 KCNH8Q96L42 1107 aa22.64■■□□□ 1.21
RPRD1A-206ENST00000588459 NUP153P49790 1475 aaKnown RBP22.61■■□□□ 1.21
RPRD1A-206ENST00000588459 CFAP43Q8NDM7 1665 aa22.6■■□□□ 1.21
RPRD1A-206ENST00000588459 TEX14Q8IWB6 1497 aa22.59■■□□□ 1.21
RPRD1A-206ENST00000588459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.57■■□□□ 1.2
RPRD1A-206ENST00000588459 HNRNPUL2Q1KMD3 747 aaKnown RBP22.57■■□□□ 1.2
RPRD1A-206ENST00000588459 ARHGAP35Q9NRY4 1499 aa22.56■■□□□ 1.2
RPRD1A-206ENST00000588459 CD109Q6YHK3 1445 aa22.56■■□□□ 1.2
RPRD1A-206ENST00000588459 COL17A1Q9UMD9 1497 aaPredicted RBP22.53■■□□□ 1.2
RPRD1A-206ENST00000588459 MAGI3Q5TCQ9 1506 aa22.52■■□□□ 1.19
RPRD1A-206ENST00000588459 ABCA9Q8IUA7 1624 aa22.49■■□□□ 1.19
RPRD1A-206ENST00000588459 AEBP2Q6ZN18 517 aaPredicted RBP22.47■■□□□ 1.19
RPRD1A-206ENST00000588459 FMN1Q68DA7 1419 aa22.47■■□□□ 1.19
RPRD1A-206ENST00000588459 CDK13Q14004 1512 aaKnown RBP22.47■■□□□ 1.19
RPRD1A-206ENST00000588459 HECW1Q76N89 1606 aa22.44■■□□□ 1.18
RPRD1A-206ENST00000588459 ATP1B4Q9UN42 357 aaPredicted RBP22.43■■□□□ 1.18
RPRD1A-206ENST00000588459 PLEKHD1A6NEE1 506 aa22.41■■□□□ 1.18
RPRD1A-206ENST00000588459 LRRIQ1Q96JM4 1722 aa22.35■■□□□ 1.17
RPRD1A-206ENST00000588459 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.35■■□□□ 1.17
RPRD1A-206ENST00000588459 TTC37Q6PGP7 1564 aa22.34■■□□□ 1.17
RPRD1A-206ENST00000588459 PCF11O94913 1555 aaKnown RBP22.33■■□□□ 1.17
RPRD1A-206ENST00000588459 CLIP1P30622 1438 aa22.32■■□□□ 1.16
RPRD1A-206ENST00000588459 ARAP3Q8WWN8 1544 aa22.32■■□□□ 1.16
RPRD1A-206ENST00000588459 NEO1Q92859 1461 aa22.3■■□□□ 1.16
RPRD1A-206ENST00000588459 KDM4FA0A1W2PPD8 638 aa22.3■■□□□ 1.16
RPRD1A-206ENST00000588459 CASKIN1Q8WXD9 1431 aa22.27■■□□□ 1.16
RPRD1A-206ENST00000588459 PHLDB1Q86UU1 1377 aa22.26■■□□□ 1.15
RPRD1A-206ENST00000588459 KIF14Q15058 1648 aa22.25■■□□□ 1.15
RPRD1A-206ENST00000588459 FANCAO15360 1455 aa22.24■■□□□ 1.15
RPRD1A-206ENST00000588459 ADGRL1O94910 1474 aa22.24■■□□□ 1.15
RPRD1A-206ENST00000588459 CDK11AQ9UQ88 783 aaPredicted RBP22.24■■□□□ 1.15
RPRD1A-206ENST00000588459 CFAP74Q9C0B2 1584 aa22.24■■□□□ 1.15
RPRD1A-206ENST00000588459 RAPGEF3O95398 923 aa22.23■■□□□ 1.15
RPRD1A-206ENST00000588459 FRMPD1Q5SYB0 1578 aa22.23■■□□□ 1.15
RPRD1A-206ENST00000588459 TROQ12816 1431 aaPredicted RBP22.22■■□□□ 1.15
RPRD1A-206ENST00000588459 CCDC18Q5T9S5 1454 aa22.22■■□□□ 1.15
RPRD1A-206ENST00000588459 FYCO1Q9BQS8 1478 aa22.22■■□□□ 1.15
RPRD1A-206ENST00000588459 AKNAQ7Z591 1439 aa22.21■■□□□ 1.15
RPRD1A-206ENST00000588459 MYO5CQ9NQX4 1742 aa22.2■■□□□ 1.14
RPRD1A-206ENST00000588459 PLCH2O75038 1416 aa22.17■■□□□ 1.14
RPRD1A-206ENST00000588459 RICTORQ6R327 1708 aa22.17■■□□□ 1.14
RPRD1A-206ENST00000588459 DENND4BO75064 1496 aaPredicted RBP22.16■■□□□ 1.14
RPRD1A-206ENST00000588459 CEP162Q5TB80 1403 aa22.16■■□□□ 1.14
RPRD1A-206ENST00000588459 LOC105371045A0A1W2PR82 267 aa22.11■■□□□ 1.13
RPRD1A-206ENST00000588459 ARHGAP5Q13017 1502 aa22.1■■□□□ 1.13
RPRD1A-206ENST00000588459 SCAPERQ9BY12 1400 aa22.08■■□□□ 1.13
RPRD1A-206ENST00000588459 ARHGEF40Q8TER5 1519 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms