RNA–Protein interactions for RNA: ENST00000588329.5

RAD23A-204, Transcript of RAD23 homolog A, nucleotide excision repair protein, humanhuman

TSL 5

Gene RAD23A, Length 1,034 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23A-204ENST00000588329 SHROOM2Q13796 1616 aa30.9■■■□□ 2.54
RAD23A-204ENST00000588329 RUSC2Q8N2Y8 1516 aa30.83■■■□□ 2.53
RAD23A-204ENST00000588329 CARMIL1Q5VZK9 1371 aa30.81■■■□□ 2.52
RAD23A-204ENST00000588329 CUL7Q14999 1698 aa30.81■■■□□ 2.52
RAD23A-204ENST00000588329 KIAA0586Q9BVV6 1533 aa30.72■■■□□ 2.51
RAD23A-204ENST00000588329 TTBK1Q5TCY1 1321 aaPredicted RBP30.7■■■□□ 2.5
RAD23A-204ENST00000588329 KIF13AQ9H1H9 1805 aa30.63■■■□□ 2.49
RAD23A-204ENST00000588329 NPM1P06748 294 aaKnown RBP eCLIP30.53■■■□□ 2.48
RAD23A-204ENST00000588329 RAPGEF2Q9Y4G8 1499 aa30.52■■■□□ 2.48
RAD23A-204ENST00000588329 IQGAP2Q13576 1575 aa30.48■■■□□ 2.47
RAD23A-204ENST00000588329 PTPRGP23470 1445 aa30.47■■■□□ 2.47
RAD23A-204ENST00000588329 CARMIL2Q6F5E8 1435 aa30.45■■■□□ 2.46
RAD23A-204ENST00000588329 ADCY10Q96PN6 1610 aa30.44■■■□□ 2.46
RAD23A-204ENST00000588329 TNIKQ9UKE5 1360 aa30.4■■■□□ 2.46
RAD23A-204ENST00000588329 FAM69CQ0P6D2 419 aa30.38■■■□□ 2.45
RAD23A-204ENST00000588329 DISP1Q96F81 1524 aa30.33■■■□□ 2.45
RAD23A-204ENST00000588329 MAPKBP1O60336 1514 aa30.27■■■□□ 2.44
RAD23A-204ENST00000588329 ABCC10Q5T3U5 1492 aa30.27■■■□□ 2.44
RAD23A-204ENST00000588329 UGGT2Q9NYU1 1516 aa30.27■■■□□ 2.44
RAD23A-204ENST00000588329 PRXQ9BXM0 1461 aa30.25■■■□□ 2.43
RAD23A-204ENST00000588329 CHIC1Q5VXU3 224 aa30.24■■■□□ 2.43
RAD23A-204ENST00000588329 FAM9AQ8IZU1 332 aaPredicted RBP30.24■■■□□ 2.43
RAD23A-204ENST00000588329 CSRNP3Q8WYN3 585 aa30.21■■■□□ 2.43
RAD23A-204ENST00000588329 DIP2BQ9P265 1576 aa30.2■■■□□ 2.43
RAD23A-204ENST00000588329 KIAA0556O60303 1618 aa30.2■■■□□ 2.43
RAD23A-204ENST00000588329 UACAQ9BZF9 1416 aa30.2■■■□□ 2.42
RAD23A-204ENST00000588329 ABCC2Q92887 1545 aa30.19■■■□□ 2.42
RAD23A-204ENST00000588329 CTTNBP2Q8WZ74 1663 aa30.19■■■□□ 2.42
RAD23A-204ENST00000588329 KDM6BO15054 1643 aa30.13■■■□□ 2.41
RAD23A-204ENST00000588329 P3H3Q8IVL6 736 aa30.12■■■□□ 2.41
RAD23A-204ENST00000588329 TSPOAP1O95153 1857 aa30.11■■■□□ 2.41
RAD23A-204ENST00000588329 ASXL2Q76L83 1435 aa30.11■■■□□ 2.41
RAD23A-204ENST00000588329 UHRF1BP1LA0JNW5 1464 aa30.11■■■□□ 2.41
RAD23A-204ENST00000588329 RANGAP1P46060 587 aaPredicted RBP30.09■■■□□ 2.41
RAD23A-204ENST00000588329 KDM4FA0A1W2PPD8 638 aa30.07■■■□□ 2.4
RAD23A-204ENST00000588329 GOLGA3Q08378 1498 aa30.06■■■□□ 2.4
RAD23A-204ENST00000588329 PLB1Q6P1J6 1458 aa30.06■■■□□ 2.4
RAD23A-204ENST00000588329 EHMT2Q96KQ7 1210 aa30.03■■■□□ 2.4
RAD23A-204ENST00000588329 ARID3CA6NKF2 412 aa30■■■□□ 2.39
RAD23A-204ENST00000588329 KDM5BQ9UGL1 1544 aa30■■■□□ 2.39
RAD23A-204ENST00000588329 ZCCHC11Q5TAX3 1644 aaKnown RBP29.98■■■□□ 2.39
RAD23A-204ENST00000588329 EEA1Q15075 1411 aa29.97■■■□□ 2.39
RAD23A-204ENST00000588329 ILDR1Q86SU0 546 aaPredicted RBP29.9■■■□□ 2.38
RAD23A-204ENST00000588329 EPRSP07814 1512 aaKnown RBP29.9■■■□□ 2.38
RAD23A-204ENST00000588329 KCNH8Q96L42 1107 aa29.89■■■□□ 2.38
RAD23A-204ENST00000588329 ABCA8O94911 1581 aa29.89■■■□□ 2.38
RAD23A-204ENST00000588329 GLI2P10070 1586 aa29.86■■■□□ 2.37
RAD23A-204ENST00000588329 WDR7Q9Y4E6 1490 aa29.83■■■□□ 2.37
RAD23A-204ENST00000588329 PPRC1Q5VV67 1664 aaKnown RBP29.8■■■□□ 2.36
RAD23A-204ENST00000588329 SAMD9Q5K651 1589 aa29.78■■■□□ 2.36
RAD23A-204ENST00000588329 FHOD3Q2V2M9 1422 aa29.76■■■□□ 2.35
RAD23A-204ENST00000588329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.75■■■□□ 2.35
RAD23A-204ENST00000588329 UBTFP17480 764 aaKnown RBP29.75■■■□□ 2.35
RAD23A-204ENST00000588329 HNRNPUL2Q1KMD3 747 aaKnown RBP29.75■■■□□ 2.35
RAD23A-204ENST00000588329 KIF21BO75037 1637 aa29.74■■■□□ 2.35
RAD23A-204ENST00000588329 MAP3K4Q9Y6R4 1608 aa29.74■■■□□ 2.35
RAD23A-204ENST00000588329 ATP10BO94823 1461 aa29.71■■■□□ 2.35
RAD23A-204ENST00000588329 ADGRL1O94910 1474 aa29.71■■■□□ 2.35
RAD23A-204ENST00000588329 COL17A1Q9UMD9 1497 aaPredicted RBP29.68■■■□□ 2.34
RAD23A-204ENST00000588329 CD109Q6YHK3 1445 aa29.66■■■□□ 2.34
RAD23A-204ENST00000588329 TEX14Q8IWB6 1497 aa29.66■■■□□ 2.34
RAD23A-204ENST00000588329 RAPGEF6Q8TEU7 1601 aa29.65■■■□□ 2.34
RAD23A-204ENST00000588329 HECW2Q9P2P5 1572 aa29.57■■■□□ 2.32
RAD23A-204ENST00000588329 NUP153P49790 1475 aaKnown RBP29.57■■■□□ 2.32
RAD23A-204ENST00000588329 CFAP43Q8NDM7 1665 aa29.55■■■□□ 2.32
RAD23A-204ENST00000588329 ATP1B4Q9UN42 357 aaPredicted RBP29.54■■■□□ 2.32
RAD23A-204ENST00000588329 EFCAB5A4FU69 1503 aa29.54■■■□□ 2.32
RAD23A-204ENST00000588329 MAGI3Q5TCQ9 1506 aa29.52■■■□□ 2.32
RAD23A-204ENST00000588329 PLEKHD1A6NEE1 506 aa29.46■■■□□ 2.31
RAD23A-204ENST00000588329 ARHGAP35Q9NRY4 1499 aa29.42■■■□□ 2.3
RAD23A-204ENST00000588329 ABCA9Q8IUA7 1624 aa29.4■■■□□ 2.3
RAD23A-204ENST00000588329 CDK13Q14004 1512 aaKnown RBP29.38■■■□□ 2.29
RAD23A-204ENST00000588329 FMN1Q68DA7 1419 aa29.32■■■□□ 2.28
RAD23A-204ENST00000588329 RAPGEF3O95398 923 aa29.32■■■□□ 2.28
RAD23A-204ENST00000588329 ARAP3Q8WWN8 1544 aa29.28■■■□□ 2.28
RAD23A-204ENST00000588329 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.24■■■□□ 2.272e-9■■■■■ 33.4
RAD23A-204ENST00000588329 HECW1Q76N89 1606 aa29.23■■■□□ 2.27
RAD23A-204ENST00000588329 NEO1Q92859 1461 aa29.23■■■□□ 2.27
RAD23A-204ENST00000588329 PHLDB1Q86UU1 1377 aa29.22■■■□□ 2.27
RAD23A-204ENST00000588329 TTC37Q6PGP7 1564 aa29.22■■■□□ 2.27
RAD23A-204ENST00000588329 CDK11AQ9UQ88 783 aaPredicted RBP29.17■■■□□ 2.26
RAD23A-204ENST00000588329 FANCAO15360 1455 aa29.17■■■□□ 2.26
RAD23A-204ENST00000588329 AKNAQ7Z591 1439 aa29.15■■■□□ 2.26
RAD23A-204ENST00000588329 CLIP1P30622 1438 aa29.11■■■□□ 2.25
RAD23A-204ENST00000588329 DENND4BO75064 1496 aaPredicted RBP29.1■■■□□ 2.25
RAD23A-204ENST00000588329 FRMPD1Q5SYB0 1578 aa29.09■■■□□ 2.25
RAD23A-204ENST00000588329 PCF11O94913 1555 aaKnown RBP29.09■■■□□ 2.25
RAD23A-204ENST00000588329 ARID4BQ4LE39 1312 aaPredicted RBP29.08■■■□□ 2.25
RAD23A-204ENST00000588329 LRRIQ1Q96JM4 1722 aa29.08■■■□□ 2.25
RAD23A-204ENST00000588329 KIF14Q15058 1648 aa29.07■■■□□ 2.24
RAD23A-204ENST00000588329 PLCH2O75038 1416 aa29.05■■■□□ 2.24
RAD23A-204ENST00000588329 TROQ12816 1431 aaPredicted RBP29.05■■■□□ 2.24
RAD23A-204ENST00000588329 CASKIN1Q8WXD9 1431 aa29.05■■■□□ 2.24
RAD23A-204ENST00000588329 FBXO41Q8TF61 875 aa29.03■■■□□ 2.24
RAD23A-204ENST00000588329 CFAP74Q9C0B2 1584 aa29.02■■■□□ 2.24
RAD23A-204ENST00000588329 SCAPERQ9BY12 1400 aa29.01■■■□□ 2.23
RAD23A-204ENST00000588329 EFCAB2Q5VUJ9 269 aa29■■■□□ 2.23
RAD23A-204ENST00000588329 RICTORQ6R327 1708 aa28.98■■■□□ 2.23
RAD23A-204ENST00000588329 MYO5CQ9NQX4 1742 aa28.96■■■□□ 2.23
RAD23A-204ENST00000588329 ADAMTSL3P82987 1691 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms