RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 CUL7Q14999 1698 aa27.87■■■□□ 2.05
ERCC1-206ENST00000588300 IGF1RP08069 1367 aa27.83■■■□□ 2.05
ERCC1-206ENST00000588300 KIAA0586Q9BVV6 1533 aa27.77■■■□□ 2.04
ERCC1-206ENST00000588300 KIF13AQ9H1H9 1805 aa27.71■■■□□ 2.03
ERCC1-206ENST00000588300 CARMIL1Q5VZK9 1371 aa27.66■■■□□ 2.02
ERCC1-206ENST00000588300 ADCY10Q96PN6 1610 aa27.63■■■□□ 2.01
ERCC1-206ENST00000588300 NPM1P06748 294 aaKnown RBP eCLIP27.63■■■□□ 2.01
ERCC1-206ENST00000588300 MAPKBP1O60336 1514 aa27.61■■■□□ 2.01
ERCC1-206ENST00000588300 ABCC10Q5T3U5 1492 aa27.56■■■□□ 2
ERCC1-206ENST00000588300 IQGAP2Q13576 1575 aa27.53■■■□□ 2
ERCC1-206ENST00000588300 DIP2BQ9P265 1576 aa27.52■■■□□ 2
ERCC1-206ENST00000588300 CARMIL2Q6F5E8 1435 aa27.51■■□□□ 1.99
ERCC1-206ENST00000588300 FAM69CQ0P6D2 419 aa27.51■■□□□ 1.99
ERCC1-206ENST00000588300 AEBP2Q6ZN18 517 aaPredicted RBP27.5■■□□□ 1.99
ERCC1-206ENST00000588300 PTPRGP23470 1445 aa27.5■■□□□ 1.99
ERCC1-206ENST00000588300 TNIKQ9UKE5 1360 aa27.46■■□□□ 1.99
ERCC1-206ENST00000588300 RAPGEF2Q9Y4G8 1499 aa27.44■■□□□ 1.98
ERCC1-206ENST00000588300 TTBK1Q5TCY1 1321 aaPredicted RBP27.41■■□□□ 1.98
ERCC1-206ENST00000588300 ABCC2Q92887 1545 aa27.37■■□□□ 1.97
ERCC1-206ENST00000588300 DISP1Q96F81 1524 aa27.36■■□□□ 1.97
ERCC1-206ENST00000588300 UGGT2Q9NYU1 1516 aa27.35■■□□□ 1.97
ERCC1-206ENST00000588300 TSPOAP1O95153 1857 aa27.33■■□□□ 1.97
ERCC1-206ENST00000588300 UHRF1BP1LA0JNW5 1464 aa27.32■■□□□ 1.96
ERCC1-206ENST00000588300 UACAQ9BZF9 1416 aa27.3■■□□□ 1.96
ERCC1-206ENST00000588300 KDM6BO15054 1643 aa27.29■■□□□ 1.96
ERCC1-206ENST00000588300 KIAA0556O60303 1618 aa27.28■■□□□ 1.96
ERCC1-206ENST00000588300 CTTNBP2Q8WZ74 1663 aa27.27■■□□□ 1.96
ERCC1-206ENST00000588300 PLB1Q6P1J6 1458 aa27.26■■□□□ 1.95
ERCC1-206ENST00000588300 ASXL2Q76L83 1435 aa27.26■■□□□ 1.95
ERCC1-206ENST00000588300 GLI2P10070 1586 aa27.22■■□□□ 1.95
ERCC1-206ENST00000588300 KDM5BQ9UGL1 1544 aa27.2■■□□□ 1.94
ERCC1-206ENST00000588300 ZCCHC11Q5TAX3 1644 aaKnown RBP27.16■■□□□ 1.94
ERCC1-206ENST00000588300 PRXQ9BXM0 1461 aa27.14■■□□□ 1.94
ERCC1-206ENST00000588300 PPRC1Q5VV67 1664 aaKnown RBP27.14■■□□□ 1.93
ERCC1-206ENST00000588300 GOLGA3Q08378 1498 aa27.13■■□□□ 1.93
ERCC1-206ENST00000588300 EPRSP07814 1512 aaKnown RBP27.11■■□□□ 1.93
ERCC1-206ENST00000588300 MAP3K4Q9Y6R4 1608 aa27.07■■□□□ 1.92
ERCC1-206ENST00000588300 ABCA8O94911 1581 aa27.02■■□□□ 1.92
ERCC1-206ENST00000588300 WDR7Q9Y4E6 1490 aa27.01■■□□□ 1.91
ERCC1-206ENST00000588300 TEX14Q8IWB6 1497 aa27■■□□□ 1.91
ERCC1-206ENST00000588300 KDM4FA0A1W2PPD8 638 aa26.92■■□□□ 1.9
ERCC1-206ENST00000588300 CSRNP3Q8WYN3 585 aa26.91■■□□□ 1.9
ERCC1-206ENST00000588300 COL17A1Q9UMD9 1497 aaPredicted RBP26.9■■□□□ 1.9
ERCC1-206ENST00000588300 CFAP43Q8NDM7 1665 aa26.89■■□□□ 1.9
ERCC1-206ENST00000588300 FAM9AQ8IZU1 332 aaPredicted RBP26.89■■□□□ 1.9
ERCC1-206ENST00000588300 EEA1Q15075 1411 aa26.86■■□□□ 1.89
ERCC1-206ENST00000588300 SAMD9Q5K651 1589 aa26.85■■□□□ 1.89
ERCC1-206ENST00000588300 CD109Q6YHK3 1445 aa26.83■■□□□ 1.89
ERCC1-206ENST00000588300 P3H3Q8IVL6 736 aa26.83■■□□□ 1.89
ERCC1-206ENST00000588300 KCNH8Q96L42 1107 aa26.83■■□□□ 1.89
ERCC1-206ENST00000588300 MAGI3Q5TCQ9 1506 aa26.83■■□□□ 1.89
ERCC1-206ENST00000588300 ATP10BO94823 1461 aa26.77■■□□□ 1.88
ERCC1-206ENST00000588300 ADGRL1O94910 1474 aa26.77■■□□□ 1.88
ERCC1-206ENST00000588300 RAPGEF6Q8TEU7 1601 aa26.76■■□□□ 1.87
ERCC1-206ENST00000588300 ARID3CA6NKF2 412 aa26.74■■□□□ 1.87
ERCC1-206ENST00000588300 ABCA9Q8IUA7 1624 aa26.68■■□□□ 1.86
ERCC1-206ENST00000588300 KIF21BO75037 1637 aa26.66■■□□□ 1.86
ERCC1-206ENST00000588300 RANGAP1P46060 587 aaPredicted RBP26.64■■□□□ 1.86
ERCC1-206ENST00000588300 FHOD3Q2V2M9 1422 aa26.64■■□□□ 1.85
ERCC1-206ENST00000588300 ARAP3Q8WWN8 1544 aa26.62■■□□□ 1.85
ERCC1-206ENST00000588300 NUP153P49790 1475 aaKnown RBP26.62■■□□□ 1.85
ERCC1-206ENST00000588300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.61■■□□□ 1.85
ERCC1-206ENST00000588300 HNRNPUL2Q1KMD3 747 aaKnown RBP26.61■■□□□ 1.85
ERCC1-206ENST00000588300 EFCAB5A4FU69 1503 aa26.6■■□□□ 1.85
ERCC1-206ENST00000588300 PHLDB1Q86UU1 1377 aa26.57■■□□□ 1.84
ERCC1-206ENST00000588300 NEO1Q92859 1461 aa26.52■■□□□ 1.84
ERCC1-206ENST00000588300 PLEKHD1A6NEE1 506 aa26.46■■□□□ 1.83
ERCC1-206ENST00000588300 HECW2Q9P2P5 1572 aa26.41■■□□□ 1.82
ERCC1-206ENST00000588300 RAPGEF3O95398 923 aa26.41■■□□□ 1.82
ERCC1-206ENST00000588300 CHIC1Q5VXU3 224 aa26.41■■□□□ 1.82
ERCC1-206ENST00000588300 FRMPD1Q5SYB0 1578 aa26.41■■□□□ 1.82
ERCC1-206ENST00000588300 UBTFP17480 764 aaKnown RBP26.4■■□□□ 1.82
ERCC1-206ENST00000588300 CFAP74Q9C0B2 1584 aa26.39■■□□□ 1.82
ERCC1-206ENST00000588300 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.39■■□□□ 1.81
ERCC1-206ENST00000588300 EHMT2Q96KQ7 1210 aa26.38■■□□□ 1.81
ERCC1-206ENST00000588300 CDK13Q14004 1512 aaKnown RBP26.37■■□□□ 1.81
ERCC1-206ENST00000588300 TTC37Q6PGP7 1564 aa26.36■■□□□ 1.81
ERCC1-206ENST00000588300 FMN1Q68DA7 1419 aa26.34■■□□□ 1.81
ERCC1-206ENST00000588300 FANCAO15360 1455 aa26.34■■□□□ 1.81
ERCC1-206ENST00000588300 HECW1Q76N89 1606 aa26.33■■□□□ 1.81
ERCC1-206ENST00000588300 AKNAQ7Z591 1439 aa26.32■■□□□ 1.8
ERCC1-206ENST00000588300 DENND4BO75064 1496 aaPredicted RBP26.32■■□□□ 1.8
ERCC1-206ENST00000588300 ARHGAP35Q9NRY4 1499 aa26.32■■□□□ 1.8
ERCC1-206ENST00000588300 RICTORQ6R327 1708 aa26.32■■□□□ 1.8
ERCC1-206ENST00000588300 ADAMTSL3P82987 1691 aa26.31■■□□□ 1.8
ERCC1-206ENST00000588300 ARHGEF40Q8TER5 1519 aa26.29■■□□□ 1.8
ERCC1-206ENST00000588300 BCORL1Q5H9F3 1711 aa26.27■■□□□ 1.8
ERCC1-206ENST00000588300 ATP1B4Q9UN42 357 aaPredicted RBP26.26■■□□□ 1.79
ERCC1-206ENST00000588300 PTPRMP28827 1452 aa26.23■■□□□ 1.79
ERCC1-206ENST00000588300 ARID4BQ4LE39 1312 aaPredicted RBP26.23■■□□□ 1.79
ERCC1-206ENST00000588300 ZMYM4Q5VZL5 1548 aa26.23■■□□□ 1.79
ERCC1-206ENST00000588300 PLCH2O75038 1416 aa26.21■■□□□ 1.79
ERCC1-206ENST00000588300 MADDQ8WXG6 1647 aa26.21■■□□□ 1.79
ERCC1-206ENST00000588300 CDK11AQ9UQ88 783 aaPredicted RBP26.2■■□□□ 1.78
ERCC1-206ENST00000588300 MYO5CQ9NQX4 1742 aa26.19■■□□□ 1.78
ERCC1-206ENST00000588300 ZFYVE16Q7Z3T8 1539 aa26.17■■□□□ 1.78
ERCC1-206ENST00000588300 KIF14Q15058 1648 aa26.17■■□□□ 1.78
ERCC1-206ENST00000588300 MAGI2Q86UL8 1455 aa26.16■■□□□ 1.78
ERCC1-206ENST00000588300 LRRIQ1Q96JM4 1722 aa26.14■■□□□ 1.78
ERCC1-206ENST00000588300 POGZQ7Z3K3 1410 aa26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms