RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 CUL7Q14999 1698 aa29.4■■■□□ 2.3
LINC01842-201ENST00000588275 IGF1RP08069 1367 aa29.39■■■□□ 2.29
LINC01842-201ENST00000588275 KIF13AQ9H1H9 1805 aa29.37■■■□□ 2.29
LINC01842-201ENST00000588275 AEBP2Q6ZN18 517 aaPredicted RBP29.35■■■□□ 2.29
LINC01842-201ENST00000588275 KIAA0586Q9BVV6 1533 aa29.34■■■□□ 2.29
LINC01842-201ENST00000588275 NPM1P06748 294 aaKnown RBP eCLIP29.3■■■□□ 2.28
LINC01842-201ENST00000588275 ADCY10Q96PN6 1610 aa29.27■■■□□ 2.28
LINC01842-201ENST00000588275 CARMIL1Q5VZK9 1371 aa29.24■■■□□ 2.27
LINC01842-201ENST00000588275 FAM69CQ0P6D2 419 aa29.22■■■□□ 2.27
LINC01842-201ENST00000588275 MAPKBP1O60336 1514 aa29.2■■■□□ 2.27
LINC01842-201ENST00000588275 ABCC10Q5T3U5 1492 aa29.2■■■□□ 2.26
LINC01842-201ENST00000588275 TTBK1Q5TCY1 1321 aaPredicted RBP29.19■■■□□ 2.26
LINC01842-201ENST00000588275 DIP2BQ9P265 1576 aa29.16■■■□□ 2.26
LINC01842-201ENST00000588275 PTPRGP23470 1445 aa29.11■■■□□ 2.25
LINC01842-201ENST00000588275 IQGAP2Q13576 1575 aa29.09■■■□□ 2.25
LINC01842-201ENST00000588275 CARMIL2Q6F5E8 1435 aa29.09■■■□□ 2.25
LINC01842-201ENST00000588275 TNIKQ9UKE5 1360 aa29.04■■■□□ 2.24
LINC01842-201ENST00000588275 TSPOAP1O95153 1857 aa29.03■■■□□ 2.24
LINC01842-201ENST00000588275 RAPGEF2Q9Y4G8 1499 aa28.97■■■□□ 2.23
LINC01842-201ENST00000588275 KDM6BO15054 1643 aa28.96■■■□□ 2.23
LINC01842-201ENST00000588275 ABCC2Q92887 1545 aa28.95■■■□□ 2.23
LINC01842-201ENST00000588275 DISP1Q96F81 1524 aa28.93■■■□□ 2.22
LINC01842-201ENST00000588275 ASXL2Q76L83 1435 aa28.88■■■□□ 2.21
LINC01842-201ENST00000588275 UACAQ9BZF9 1416 aa28.87■■■□□ 2.21
LINC01842-201ENST00000588275 UHRF1BP1LA0JNW5 1464 aa28.86■■■□□ 2.21
LINC01842-201ENST00000588275 UGGT2Q9NYU1 1516 aa28.86■■■□□ 2.21
LINC01842-201ENST00000588275 PLB1Q6P1J6 1458 aa28.85■■■□□ 2.21
LINC01842-201ENST00000588275 KIAA0556O60303 1618 aa28.83■■■□□ 2.21
LINC01842-201ENST00000588275 CTTNBP2Q8WZ74 1663 aa28.79■■■□□ 2.2
LINC01842-201ENST00000588275 GLI2P10070 1586 aa28.77■■■□□ 2.2
LINC01842-201ENST00000588275 ZCCHC11Q5TAX3 1644 aaKnown RBP28.75■■■□□ 2.19
LINC01842-201ENST00000588275 KDM5BQ9UGL1 1544 aa28.74■■■□□ 2.19
LINC01842-201ENST00000588275 PPRC1Q5VV67 1664 aaKnown RBP28.74■■■□□ 2.19
LINC01842-201ENST00000588275 EPRSP07814 1512 aaKnown RBP28.69■■■□□ 2.18
LINC01842-201ENST00000588275 GOLGA3Q08378 1498 aa28.65■■■□□ 2.18
LINC01842-201ENST00000588275 MAP3K4Q9Y6R4 1608 aa28.65■■■□□ 2.18
LINC01842-201ENST00000588275 KDM4FA0A1W2PPD8 638 aa28.63■■■□□ 2.17
LINC01842-201ENST00000588275 PRXQ9BXM0 1461 aa28.61■■■□□ 2.17
LINC01842-201ENST00000588275 WDR7Q9Y4E6 1490 aa28.59■■■□□ 2.17
LINC01842-201ENST00000588275 TEX14Q8IWB6 1497 aa28.58■■■□□ 2.17
LINC01842-201ENST00000588275 ABCA8O94911 1581 aa28.54■■■□□ 2.16
LINC01842-201ENST00000588275 COL17A1Q9UMD9 1497 aaPredicted RBP28.53■■■□□ 2.16
LINC01842-201ENST00000588275 KCNH8Q96L42 1107 aa28.48■■■□□ 2.15
LINC01842-201ENST00000588275 P3H3Q8IVL6 736 aa28.46■■■□□ 2.15
LINC01842-201ENST00000588275 ADGRL1O94910 1474 aa28.45■■■□□ 2.14
LINC01842-201ENST00000588275 CFAP43Q8NDM7 1665 aa28.44■■■□□ 2.14
LINC01842-201ENST00000588275 ARID3CA6NKF2 412 aa28.43■■■□□ 2.14
LINC01842-201ENST00000588275 FAM9AQ8IZU1 332 aaPredicted RBP28.42■■■□□ 2.14
LINC01842-201ENST00000588275 CD109Q6YHK3 1445 aa28.42■■■□□ 2.14
LINC01842-201ENST00000588275 CSRNP3Q8WYN3 585 aa28.39■■■□□ 2.14
LINC01842-201ENST00000588275 MAGI3Q5TCQ9 1506 aa28.37■■■□□ 2.13
LINC01842-201ENST00000588275 SAMD9Q5K651 1589 aa28.33■■■□□ 2.12
LINC01842-201ENST00000588275 RANGAP1P46060 587 aaPredicted RBP28.3■■■□□ 2.12
LINC01842-201ENST00000588275 ATP10BO94823 1461 aa28.29■■■□□ 2.12
LINC01842-201ENST00000588275 RAPGEF6Q8TEU7 1601 aa28.26■■■□□ 2.11
LINC01842-201ENST00000588275 EEA1Q15075 1411 aa28.25■■■□□ 2.11
LINC01842-201ENST00000588275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.23■■■□□ 2.11
LINC01842-201ENST00000588275 HNRNPUL2Q1KMD3 747 aaKnown RBP28.23■■■□□ 2.11
LINC01842-201ENST00000588275 ABCA9Q8IUA7 1624 aa28.18■■■□□ 2.1
LINC01842-201ENST00000588275 FHOD3Q2V2M9 1422 aa28.18■■■□□ 2.1
LINC01842-201ENST00000588275 KIF21BO75037 1637 aa28.17■■■□□ 2.1
LINC01842-201ENST00000588275 ARAP3Q8WWN8 1544 aa28.14■■■□□ 2.1
LINC01842-201ENST00000588275 NUP153P49790 1475 aaKnown RBP28.13■■■□□ 2.09
LINC01842-201ENST00000588275 HECW2Q9P2P5 1572 aa28.08■■■□□ 2.09
LINC01842-201ENST00000588275 PHLDB1Q86UU1 1377 aa28.05■■■□□ 2.08
LINC01842-201ENST00000588275 NEO1Q92859 1461 aa28.03■■■□□ 2.08
LINC01842-201ENST00000588275 RAPGEF3O95398 923 aa28.03■■■□□ 2.08
LINC01842-201ENST00000588275 EHMT2Q96KQ7 1210 aa28.03■■■□□ 2.08
LINC01842-201ENST00000588275 EFCAB5A4FU69 1503 aa28.02■■■□□ 2.08
LINC01842-201ENST00000588275 PLEKHD1A6NEE1 506 aa27.99■■■□□ 2.07
LINC01842-201ENST00000588275 FRMPD1Q5SYB0 1578 aa27.95■■■□□ 2.07
LINC01842-201ENST00000588275 UBTFP17480 764 aaKnown RBP27.91■■■□□ 2.06
LINC01842-201ENST00000588275 CDK13Q14004 1512 aaKnown RBP27.9■■■□□ 2.06
LINC01842-201ENST00000588275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.9■■■□□ 2.06
LINC01842-201ENST00000588275 TTC37Q6PGP7 1564 aa27.89■■■□□ 2.05
LINC01842-201ENST00000588275 ARID4BQ4LE39 1312 aaPredicted RBP27.89■■■□□ 2.05
LINC01842-201ENST00000588275 ILDR1Q86SU0 546 aaPredicted RBP27.88■■■□□ 2.05
LINC01842-201ENST00000588275 CFAP74Q9C0B2 1584 aa27.88■■■□□ 2.05
LINC01842-201ENST00000588275 FANCAO15360 1455 aa27.87■■■□□ 2.05
LINC01842-201ENST00000588275 ADAMTSL3P82987 1691 aa27.87■■■□□ 2.05
LINC01842-201ENST00000588275 AKNAQ7Z591 1439 aa27.86■■■□□ 2.05
LINC01842-201ENST00000588275 ATP1B4Q9UN42 357 aaPredicted RBP27.86■■■□□ 2.05
LINC01842-201ENST00000588275 DENND4BO75064 1496 aaPredicted RBP27.86■■■□□ 2.05
LINC01842-201ENST00000588275 RICTORQ6R327 1708 aa27.84■■■□□ 2.05
LINC01842-201ENST00000588275 BCORL1Q5H9F3 1711 aa27.84■■■□□ 2.05
LINC01842-201ENST00000588275 PTPRMP28827 1452 aa27.83■■■□□ 2.05
LINC01842-201ENST00000588275 ARHGEF40Q8TER5 1519 aa27.83■■■□□ 2.05
LINC01842-201ENST00000588275 CHIC1Q5VXU3 224 aa27.8■■■□□ 2.04
LINC01842-201ENST00000588275 HECW1Q76N89 1606 aa27.8■■■□□ 2.04
LINC01842-201ENST00000588275 MADDQ8WXG6 1647 aa27.8■■■□□ 2.04
LINC01842-201ENST00000588275 FMN1Q68DA7 1419 aa27.78■■■□□ 2.04
LINC01842-201ENST00000588275 ARHGAP35Q9NRY4 1499 aa27.77■■■□□ 2.04
LINC01842-201ENST00000588275 ZMYM4Q5VZL5 1548 aa27.72■■■□□ 2.03
LINC01842-201ENST00000588275 ZFYVE16Q7Z3T8 1539 aa27.72■■■□□ 2.03
LINC01842-201ENST00000588275 RIMS1Q86UR5 1692 aaKnown RBP27.72■■■□□ 2.03
LINC01842-201ENST00000588275 PLCH2O75038 1416 aa27.69■■■□□ 2.02
LINC01842-201ENST00000588275 YEATS2Q9ULM3 1422 aa27.68■■■□□ 2.02
LINC01842-201ENST00000588275 MYO5CQ9NQX4 1742 aa27.68■■■□□ 2.02
LINC01842-201ENST00000588275 SCAPERQ9BY12 1400 aa27.67■■■□□ 2.02
LINC01842-201ENST00000588275 CDK11AQ9UQ88 783 aaPredicted RBP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms