RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 CTTNBP2Q8WZ74 1663 aa22.84■■□□□ 1.25
CCDC130-208ENST00000588071 NUP160Q12769 1436 aa22.83■■□□□ 1.25
CCDC130-208ENST00000588071 TNIKQ9UKE5 1360 aa22.79■■□□□ 1.24
CCDC130-208ENST00000588071 KIAA0586Q9BVV6 1533 aa22.77■■□□□ 1.24
CCDC130-208ENST00000588071 RANGAP1P46060 587 aaPredicted RBP22.77■■□□□ 1.24
CCDC130-208ENST00000588071 IQGAP2Q13576 1575 aa22.73■■□□□ 1.23
CCDC130-208ENST00000588071 JPH4Q96JJ6 628 aa22.71■■□□□ 1.23
CCDC130-208ENST00000588071 CLASP1Q7Z460 1538 aa22.69■■□□□ 1.22
CCDC130-208ENST00000588071 UGGT2Q9NYU1 1516 aa22.61■■□□□ 1.21
CCDC130-208ENST00000588071 SHROOM2Q13796 1616 aa22.6■■□□□ 1.21
CCDC130-208ENST00000588071 CEP162Q5TB80 1403 aa22.59■■□□□ 1.21
CCDC130-208ENST00000588071 CLIP1P30622 1438 aa22.58■■□□□ 1.21
CCDC130-208ENST00000588071 P3H3Q8IVL6 736 aa22.58■■□□□ 1.21
CCDC130-208ENST00000588071 PRG4Q92954 1404 aaPredicted RBP22.57■■□□□ 1.2
CCDC130-208ENST00000588071 CARMIL2Q6F5E8 1435 aa22.57■■□□□ 1.2
CCDC130-208ENST00000588071 EFCAB5A4FU69 1503 aa22.53■■□□□ 1.2
CCDC130-208ENST00000588071 SAMD9Q5K651 1589 aa22.51■■□□□ 1.19
CCDC130-208ENST00000588071 ARHGAP35Q9NRY4 1499 aa22.51■■□□□ 1.19
CCDC130-208ENST00000588071 DISP1Q96F81 1524 aa22.51■■□□□ 1.19
CCDC130-208ENST00000588071 KIAA0556O60303 1618 aa22.5■■□□□ 1.19
CCDC130-208ENST00000588071 TTBK1Q5TCY1 1321 aaPredicted RBP22.49■■□□□ 1.19
CCDC130-208ENST00000588071 ERCC6L2Q5T890 1561 aa22.47■■□□□ 1.19
CCDC130-208ENST00000588071 FHOD3Q2V2M9 1422 aa22.45■■□□□ 1.18
CCDC130-208ENST00000588071 ARHGEF11O15085 1522 aa22.41■■□□□ 1.18
CCDC130-208ENST00000588071 ARAP1Q96P48 1450 aa22.4■■□□□ 1.18
CCDC130-208ENST00000588071 PTPRGP23470 1445 aa22.39■■□□□ 1.17
CCDC130-208ENST00000588071 RIMBP3CA6NJZ7 1639 aa22.37■■□□□ 1.17
CCDC130-208ENST00000588071 RIMBP3BA6NNM3 1639 aa22.37■■□□□ 1.17
CCDC130-208ENST00000588071 RIMBP3Q9UFD9 1639 aa22.37■■□□□ 1.17
CCDC130-208ENST00000588071 FMN1Q68DA7 1419 aa22.35■■□□□ 1.17
CCDC130-208ENST00000588071 DNAJC5Q9H3Z4 198 aa22.34■■□□□ 1.17
CCDC130-208ENST00000588071 ATP1B4Q9UN42 357 aaPredicted RBP22.31■■□□□ 1.16
CCDC130-208ENST00000588071 CYB5RLQ6IPT4 315 aa22.28■■□□□ 1.16
CCDC130-208ENST00000588071 VPS8Q8N3P4 1428 aa22.28■■□□□ 1.16
CCDC130-208ENST00000588071 UACAQ9BZF9 1416 aa22.24■■□□□ 1.15
CCDC130-208ENST00000588071 PLB1Q6P1J6 1458 aa22.24■■□□□ 1.15
CCDC130-208ENST00000588071 RAPGEF6Q8TEU7 1601 aa22.24■■□□□ 1.15
CCDC130-208ENST00000588071 CASKIN1Q8WXD9 1431 aa22.22■■□□□ 1.15
CCDC130-208ENST00000588071 ABCA8O94911 1581 aa22.21■■□□□ 1.15
CCDC130-208ENST00000588071 PCF11O94913 1555 aaKnown RBP22.21■■□□□ 1.15
CCDC130-208ENST00000588071 APLP2Q06481 763 aa22.19■■□□□ 1.14
CCDC130-208ENST00000588071 HECW1Q76N89 1606 aa22.17■■□□□ 1.14
CCDC130-208ENST00000588071 FYCO1Q9BQS8 1478 aa22.17■■□□□ 1.14
CCDC130-208ENST00000588071 ARID3CA6NKF2 412 aa22.17■■□□□ 1.14
CCDC130-208ENST00000588071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.16■■□□□ 1.14
CCDC130-208ENST00000588071 HNRNPUL2Q1KMD3 747 aaKnown RBP22.16■■□□□ 1.14
CCDC130-208ENST00000588071 ABCC2Q92887 1545 aa22.16■■□□□ 1.14
CCDC130-208ENST00000588071 UHRF1BP1LA0JNW5 1464 aa22.15■■□□□ 1.14
CCDC130-208ENST00000588071 NPM1P06748 294 aaKnown RBP eCLIP22.13■■□□□ 1.13
CCDC130-208ENST00000588071 ADCY10Q96PN6 1610 aa22.13■■□□□ 1.13
CCDC130-208ENST00000588071 NUP153P49790 1475 aaKnown RBP22.12■■□□□ 1.13
CCDC130-208ENST00000588071 LRRIQ1Q96JM4 1722 aa22.1■■□□□ 1.13
CCDC130-208ENST00000588071 EPRSP07814 1512 aaKnown RBP22.09■■□□□ 1.13
CCDC130-208ENST00000588071 ATP10BO94823 1461 aa22.07■■□□□ 1.12
CCDC130-208ENST00000588071 CCDC18Q5T9S5 1454 aa22.07■■□□□ 1.12
CCDC130-208ENST00000588071 CDK11AQ9UQ88 783 aaPredicted RBP22.05■■□□□ 1.12
CCDC130-208ENST00000588071 CDK13Q14004 1512 aaKnown RBP22.05■■□□□ 1.12
CCDC130-208ENST00000588071 ZCCHC11Q5TAX3 1644 aaKnown RBP22.04■■□□□ 1.12
CCDC130-208ENST00000588071 KDM5BQ9UGL1 1544 aa22.04■■□□□ 1.12
CCDC130-208ENST00000588071 PLEKHD1A6NEE1 506 aa22.01■■□□□ 1.11
CCDC130-208ENST00000588071 MAP3K1Q13233 1512 aa22.01■■□□□ 1.11
CCDC130-208ENST00000588071 TIAM1Q13009 1591 aa22■■□□□ 1.11
CCDC130-208ENST00000588071 CFAP43Q8NDM7 1665 aa21.99■■□□□ 1.11
CCDC130-208ENST00000588071 PPARGC1BQ86YN6 1023 aaKnown RBP21.96■■□□□ 1.11
CCDC130-208ENST00000588071 KANK4Q5T7N3 995 aaPredicted RBP21.95■■□□□ 1.1
CCDC130-208ENST00000588071 MTUS2Q5JR59 1369 aa21.95■■□□□ 1.1
CCDC130-208ENST00000588071 LRRC9Q6ZRR7 1453 aa21.91■■□□□ 1.1
CCDC130-208ENST00000588071 KCNH8Q96L42 1107 aa21.91■■□□□ 1.1
CCDC130-208ENST00000588071 ASXL2Q76L83 1435 aa21.9■■□□□ 1.1
CCDC130-208ENST00000588071 TROQ12816 1431 aaPredicted RBP21.89■■□□□ 1.09
CCDC130-208ENST00000588071 MAGI3Q5TCQ9 1506 aa21.88■■□□□ 1.09
CCDC130-208ENST00000588071 EHBP1L1Q8N3D4 1523 aa21.86■■□□□ 1.09
CCDC130-208ENST00000588071 WDR7Q9Y4E6 1490 aa21.86■■□□□ 1.09
CCDC130-208ENST00000588071 MAPKBP1O60336 1514 aa21.85■■□□□ 1.09
CCDC130-208ENST00000588071 SUPT6HQ7KZ85 1726 aaKnown RBP21.83■■□□□ 1.08
CCDC130-208ENST00000588071 KIF14Q15058 1648 aa21.8■■□□□ 1.08
CCDC130-208ENST00000588071 NCOA2Q15596 1464 aa21.76■■□□□ 1.07
CCDC130-208ENST00000588071 FAM69CQ0P6D2 419 aa21.74■■□□□ 1.07
CCDC130-208ENST00000588071 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.73■■□□□ 1.07
CCDC130-208ENST00000588071 CCNB3Q8WWL7 1395 aa21.73■■□□□ 1.07
CCDC130-208ENST00000588071 ABCC10Q5T3U5 1492 aa21.71■■□□□ 1.07
CCDC130-208ENST00000588071 ABCA9Q8IUA7 1624 aa21.69■■□□□ 1.06
CCDC130-208ENST00000588071 TRHP20396 242 aaPredicted RBP21.68■■□□□ 1.06
CCDC130-208ENST00000588071 GLI2P10070 1586 aa21.68■■□□□ 1.06
CCDC130-208ENST00000588071 TTC37Q6PGP7 1564 aa21.68■■□□□ 1.06
CCDC130-208ENST00000588071 DIP2BQ9P265 1576 aa21.68■■□□□ 1.06
CCDC130-208ENST00000588071 MYO5CQ9NQX4 1742 aa21.67■■□□□ 1.06
CCDC130-208ENST00000588071 PHLDB1Q86UU1 1377 aa21.67■■□□□ 1.06
CCDC130-208ENST00000588071 KIF13AQ9H1H9 1805 aa21.66■■□□□ 1.06
CCDC130-208ENST00000588071 CDC42BPAQ5VT25 1732 aa21.66■■□□□ 1.06
CCDC130-208ENST00000588071 ITSN2Q9NZM3 1697 aa21.65■■□□□ 1.06
CCDC130-208ENST00000588071 GPATCH8Q9UKJ3 1502 aaKnown RBP21.65■■□□□ 1.06
CCDC130-208ENST00000588071 CD109Q6YHK3 1445 aa21.64■■□□□ 1.06
CCDC130-208ENST00000588071 CFDP1Q9UEE9 299 aaPredicted RBP21.64■■□□□ 1.05
CCDC130-208ENST00000588071 MYOM3Q5VTT5 1437 aa21.63■■□□□ 1.05
CCDC130-208ENST00000588071 TSPOAP1O95153 1857 aa21.62■■□□□ 1.05
CCDC130-208ENST00000588071 CDC42BPBQ9Y5S2 1711 aa21.62■■□□□ 1.05
CCDC130-208ENST00000588071 PLCH2O75038 1416 aa21.62■■□□□ 1.05
CCDC130-208ENST00000588071 ZNF777Q9ULD5 760 aaPredicted RBP21.61■■□□□ 1.05
CCDC130-208ENST00000588071 MAP3K4Q9Y6R4 1608 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms