RNA–Protein interactions for RNA: ENST00000587956.5

RANBP3-213, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 512 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-213ENST00000587956 PRG4Q92954 1404 aaPredicted RBP24.21■■□□□ 1.47
RANBP3-213ENST00000587956 JPH4Q96JJ6 628 aa24.19■■□□□ 1.46
RANBP3-213ENST00000587956 CARMIL1Q5VZK9 1371 aa24.14■■□□□ 1.45
RANBP3-213ENST00000587956 KIAA0586Q9BVV6 1533 aa24.09■■□□□ 1.45
RANBP3-213ENST00000587956 TTBK1Q5TCY1 1321 aaPredicted RBP24■■□□□ 1.43
RANBP3-213ENST00000587956 IQGAP2Q13576 1575 aa23.96■■□□□ 1.43
RANBP3-213ENST00000587956 RAPGEF2Q9Y4G8 1499 aa23.94■■□□□ 1.42
RANBP3-213ENST00000587956 ADCY10Q96PN6 1610 aa23.93■■□□□ 1.42
RANBP3-213ENST00000587956 KIF13AQ9H1H9 1805 aa23.91■■□□□ 1.42
RANBP3-213ENST00000587956 NPM1P06748 294 aaKnown RBP eCLIP23.89■■□□□ 1.41
RANBP3-213ENST00000587956 CARMIL2Q6F5E8 1435 aa23.86■■□□□ 1.41
RANBP3-213ENST00000587956 CTTNBP2Q8WZ74 1663 aa23.85■■□□□ 1.41
RANBP3-213ENST00000587956 PTPRGP23470 1445 aa23.84■■□□□ 1.41
RANBP3-213ENST00000587956 TNIKQ9UKE5 1360 aa23.81■■□□□ 1.4
RANBP3-213ENST00000587956 DISP1Q96F81 1524 aa23.79■■□□□ 1.4
RANBP3-213ENST00000587956 MAPKBP1O60336 1514 aa23.76■■□□□ 1.39
RANBP3-213ENST00000587956 UGGT2Q9NYU1 1516 aa23.76■■□□□ 1.39
RANBP3-213ENST00000587956 KIAA0556O60303 1618 aa23.75■■□□□ 1.39
RANBP3-213ENST00000587956 FAM69CQ0P6D2 419 aa23.75■■□□□ 1.39
RANBP3-213ENST00000587956 DIP2BQ9P265 1576 aa23.73■■□□□ 1.39
RANBP3-213ENST00000587956 TSPOAP1O95153 1857 aa23.73■■□□□ 1.39
RANBP3-213ENST00000587956 ABCC10Q5T3U5 1492 aa23.72■■□□□ 1.39
RANBP3-213ENST00000587956 PRXQ9BXM0 1461 aa23.72■■□□□ 1.39
RANBP3-213ENST00000587956 ABCC2Q92887 1545 aa23.67■■□□□ 1.38
RANBP3-213ENST00000587956 UACAQ9BZF9 1416 aa23.67■■□□□ 1.38
RANBP3-213ENST00000587956 FAM9AQ8IZU1 332 aaPredicted RBP23.65■■□□□ 1.38
RANBP3-213ENST00000587956 CSRNP3Q8WYN3 585 aa23.65■■□□□ 1.38
RANBP3-213ENST00000587956 UHRF1BP1LA0JNW5 1464 aa23.62■■□□□ 1.37
RANBP3-213ENST00000587956 GOLGA3Q08378 1498 aa23.6■■□□□ 1.37
RANBP3-213ENST00000587956 ASXL2Q76L83 1435 aa23.59■■□□□ 1.37
RANBP3-213ENST00000587956 ZCCHC11Q5TAX3 1644 aaKnown RBP23.59■■□□□ 1.37
RANBP3-213ENST00000587956 P3H3Q8IVL6 736 aa23.56■■□□□ 1.36
RANBP3-213ENST00000587956 PLB1Q6P1J6 1458 aa23.55■■□□□ 1.36
RANBP3-213ENST00000587956 EEA1Q15075 1411 aa23.53■■□□□ 1.36
RANBP3-213ENST00000587956 KDM5BQ9UGL1 1544 aa23.53■■□□□ 1.36
RANBP3-213ENST00000587956 RANGAP1P46060 587 aaPredicted RBP23.52■■□□□ 1.36
RANBP3-213ENST00000587956 KDM6BO15054 1643 aa23.49■■□□□ 1.35
RANBP3-213ENST00000587956 EHMT2Q96KQ7 1210 aa23.48■■□□□ 1.35
RANBP3-213ENST00000587956 ABCA8O94911 1581 aa23.48■■□□□ 1.35
RANBP3-213ENST00000587956 CHIC1Q5VXU3 224 aa23.47■■□□□ 1.35
RANBP3-213ENST00000587956 PPRC1Q5VV67 1664 aaKnown RBP23.46■■□□□ 1.35
RANBP3-213ENST00000587956 GLI2P10070 1586 aa23.45■■□□□ 1.34
RANBP3-213ENST00000587956 ARID3CA6NKF2 412 aa23.44■■□□□ 1.34
RANBP3-213ENST00000587956 EPRSP07814 1512 aaKnown RBP23.43■■□□□ 1.34
RANBP3-213ENST00000587956 AEBP2Q6ZN18 517 aaPredicted RBP23.43■■□□□ 1.34
RANBP3-213ENST00000587956 SAMD9Q5K651 1589 aa23.43■■□□□ 1.34
RANBP3-213ENST00000587956 KIF21BO75037 1637 aa23.41■■□□□ 1.34
RANBP3-213ENST00000587956 MAP3K4Q9Y6R4 1608 aa23.4■■□□□ 1.34
RANBP3-213ENST00000587956 WDR7Q9Y4E6 1490 aa23.39■■□□□ 1.34
RANBP3-213ENST00000587956 KCNH8Q96L42 1107 aa23.37■■□□□ 1.33
RANBP3-213ENST00000587956 RAPGEF6Q8TEU7 1601 aa23.33■■□□□ 1.33
RANBP3-213ENST00000587956 FHOD3Q2V2M9 1422 aa23.33■■□□□ 1.32
RANBP3-213ENST00000587956 UBTFP17480 764 aaKnown RBP23.29■■□□□ 1.32
RANBP3-213ENST00000587956 ATP10BO94823 1461 aa23.29■■□□□ 1.32
RANBP3-213ENST00000587956 CFAP43Q8NDM7 1665 aa23.28■■□□□ 1.32
RANBP3-213ENST00000587956 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.27■■□□□ 1.32
RANBP3-213ENST00000587956 HNRNPUL2Q1KMD3 747 aaKnown RBP23.27■■□□□ 1.32
RANBP3-213ENST00000587956 TEX14Q8IWB6 1497 aa23.26■■□□□ 1.31
RANBP3-213ENST00000587956 CD109Q6YHK3 1445 aa23.23■■□□□ 1.31
RANBP3-213ENST00000587956 COL17A1Q9UMD9 1497 aaPredicted RBP23.22■■□□□ 1.31
RANBP3-213ENST00000587956 EFCAB5A4FU69 1503 aa23.21■■□□□ 1.31
RANBP3-213ENST00000587956 NUP153P49790 1475 aaKnown RBP23.19■■□□□ 1.3
RANBP3-213ENST00000587956 MAGI3Q5TCQ9 1506 aa23.15■■□□□ 1.3
RANBP3-213ENST00000587956 ABCA9Q8IUA7 1624 aa23.12■■□□□ 1.29
RANBP3-213ENST00000587956 ATP1B4Q9UN42 357 aaPredicted RBP23.1■■□□□ 1.29
RANBP3-213ENST00000587956 KDM4FA0A1W2PPD8 638 aa23.09■■□□□ 1.29
RANBP3-213ENST00000587956 ARHGAP35Q9NRY4 1499 aa23.08■■□□□ 1.29
RANBP3-213ENST00000587956 CDK13Q14004 1512 aaKnown RBP23.07■■□□□ 1.28
RANBP3-213ENST00000587956 PLEKHD1A6NEE1 506 aa23.05■■□□□ 1.28
RANBP3-213ENST00000587956 HECW1Q76N89 1606 aa23.01■■□□□ 1.27
RANBP3-213ENST00000587956 ADGRL1O94910 1474 aa23■■□□□ 1.27
RANBP3-213ENST00000587956 FMN1Q68DA7 1419 aa22.99■■□□□ 1.27
RANBP3-213ENST00000587956 ARAP3Q8WWN8 1544 aa22.97■■□□□ 1.27
RANBP3-213ENST00000587956 TTC37Q6PGP7 1564 aa22.97■■□□□ 1.27
RANBP3-213ENST00000587956 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.96■■□□□ 1.277e-8■□□□□ 9
RANBP3-213ENST00000587956 LRRIQ1Q96JM4 1722 aa22.96■■□□□ 1.27
RANBP3-213ENST00000587956 NEO1Q92859 1461 aa22.92■■□□□ 1.26
RANBP3-213ENST00000587956 RAPGEF3O95398 923 aa22.92■■□□□ 1.26
RANBP3-213ENST00000587956 PHLDB1Q86UU1 1377 aa22.89■■□□□ 1.26
RANBP3-213ENST00000587956 PCF11O94913 1555 aaKnown RBP22.89■■□□□ 1.25
RANBP3-213ENST00000587956 FRMPD1Q5SYB0 1578 aa22.87■■□□□ 1.25
RANBP3-213ENST00000587956 CFAP74Q9C0B2 1584 aa22.87■■□□□ 1.25
RANBP3-213ENST00000587956 FANCAO15360 1455 aa22.86■■□□□ 1.25
RANBP3-213ENST00000587956 KIF14Q15058 1648 aa22.86■■□□□ 1.25
RANBP3-213ENST00000587956 MYO5CQ9NQX4 1742 aa22.85■■□□□ 1.25
RANBP3-213ENST00000587956 AKNAQ7Z591 1439 aa22.84■■□□□ 1.25
RANBP3-213ENST00000587956 CDK11AQ9UQ88 783 aaPredicted RBP22.84■■□□□ 1.25
RANBP3-213ENST00000587956 RICTORQ6R327 1708 aa22.83■■□□□ 1.25
RANBP3-213ENST00000587956 CLIP1P30622 1438 aa22.82■■□□□ 1.24
RANBP3-213ENST00000587956 DENND4BO75064 1496 aaPredicted RBP22.8■■□□□ 1.24
RANBP3-213ENST00000587956 TROQ12816 1431 aaPredicted RBP22.78■■□□□ 1.24
RANBP3-213ENST00000587956 CASKIN1Q8WXD9 1431 aa22.78■■□□□ 1.24
RANBP3-213ENST00000587956 PLCH2O75038 1416 aa22.76■■□□□ 1.23
RANBP3-213ENST00000587956 CCDC18Q5T9S5 1454 aa22.74■■□□□ 1.23
RANBP3-213ENST00000587956 ARID4BQ4LE39 1312 aaPredicted RBP22.74■■□□□ 1.23
RANBP3-213ENST00000587956 SCAPERQ9BY12 1400 aa22.72■■□□□ 1.23
RANBP3-213ENST00000587956 FYCO1Q9BQS8 1478 aa22.72■■□□□ 1.23
RANBP3-213ENST00000587956 ARHGAP5Q13017 1502 aa22.72■■□□□ 1.23
RANBP3-213ENST00000587956 ARHGEF40Q8TER5 1519 aa22.72■■□□□ 1.23
RANBP3-213ENST00000587956 CDC42BPBQ9Y5S2 1711 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms