RNA–Protein interactions for RNA: ENST00000587757.5

LDLRAD4-211, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2 BASIC

Gene LDLRAD4, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-211ENST00000587757 ADAMTS12P58397 1594 aa29.15■■■□□ 2.26
LDLRAD4-211ENST00000587757 CHMP7Q8WUX9 453 aaPredicted RBP29.13■■■□□ 2.25
LDLRAD4-211ENST00000587757 FBLN2P98095 1184 aa29.13■■■□□ 2.25
LDLRAD4-211ENST00000587757 MAGI1Q96QZ7 1491 aaPredicted RBP29.11■■■□□ 2.25
LDLRAD4-211ENST00000587757 SYNJ2O15056 1496 aa29.04■■■□□ 2.24
LDLRAD4-211ENST00000587757 ARHGAP35Q9NRY4 1499 aa29.03■■■□□ 2.24
LDLRAD4-211ENST00000587757 GRIN2AQ12879 1464 aa29.01■■■□□ 2.24
LDLRAD4-211ENST00000587757 P3H3Q8IVL6 736 aa29.01■■■□□ 2.23
LDLRAD4-211ENST00000587757 ARAP1Q96P48 1450 aa28.98■■■□□ 2.23
LDLRAD4-211ENST00000587757 VPS8Q8N3P4 1428 aa28.94■■■□□ 2.22
LDLRAD4-211ENST00000587757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.94■■■□□ 2.22
LDLRAD4-211ENST00000587757 CTTNBP2Q8WZ74 1663 aa28.92■■■□□ 2.22
LDLRAD4-211ENST00000587757 KIAA0586Q9BVV6 1533 aa28.87■■■□□ 2.21
LDLRAD4-211ENST00000587757 CCER1Q8TC90 406 aaPredicted RBP28.85■■■□□ 2.21
LDLRAD4-211ENST00000587757 NUP160Q12769 1436 aa28.82■■■□□ 2.2
LDLRAD4-211ENST00000587757 FHOD3Q2V2M9 1422 aa28.82■■■□□ 2.2
LDLRAD4-211ENST00000587757 IQGAP2Q13576 1575 aa28.81■■■□□ 2.2
LDLRAD4-211ENST00000587757 CEP170Q5SW79 1584 aa28.81■■■□□ 2.2
LDLRAD4-211ENST00000587757 TTBK1Q5TCY1 1321 aaPredicted RBP28.8■■■□□ 2.2
LDLRAD4-211ENST00000587757 EFCAB5A4FU69 1503 aa28.78■■■□□ 2.2
LDLRAD4-211ENST00000587757 APLP2Q06481 763 aa28.76■■■□□ 2.19
LDLRAD4-211ENST00000587757 JPH4Q96JJ6 628 aa28.76■■■□□ 2.19
LDLRAD4-211ENST00000587757 SAMD9Q5K651 1589 aa28.71■■■□□ 2.19
LDLRAD4-211ENST00000587757 UGGT2Q9NYU1 1516 aa28.7■■■□□ 2.19
LDLRAD4-211ENST00000587757 ATP1B4Q9UN42 357 aaPredicted RBP28.67■■■□□ 2.18
LDLRAD4-211ENST00000587757 CHD1O14646 1710 aa28.65■■■□□ 2.18
LDLRAD4-211ENST00000587757 DISP1Q96F81 1524 aa28.63■■■□□ 2.17
LDLRAD4-211ENST00000587757 FMN1Q68DA7 1419 aa28.63■■■□□ 2.17
LDLRAD4-211ENST00000587757 KANK4Q5T7N3 995 aaPredicted RBP28.6■■■□□ 2.17
LDLRAD4-211ENST00000587757 CASKIN1Q8WXD9 1431 aa28.55■■■□□ 2.16
LDLRAD4-211ENST00000587757 SCAF1Q9H7N4 1312 aaKnown RBP28.54■■■□□ 2.16
LDLRAD4-211ENST00000587757 CARMIL2Q6F5E8 1435 aa28.52■■■□□ 2.16
LDLRAD4-211ENST00000587757 KIAA0556O60303 1618 aa28.52■■■□□ 2.16
LDLRAD4-211ENST00000587757 PCF11O94913 1555 aaKnown RBP28.5■■■□□ 2.15
LDLRAD4-211ENST00000587757 PRG4Q92954 1404 aaPredicted RBP28.5■■■□□ 2.15
LDLRAD4-211ENST00000587757 FYCO1Q9BQS8 1478 aa28.47■■■□□ 2.15
LDLRAD4-211ENST00000587757 OSCARQ8IYS5 282 aa28.43■■■□□ 2.14
LDLRAD4-211ENST00000587757 MAP3K1Q13233 1512 aa28.4■■■□□ 2.14
LDLRAD4-211ENST00000587757 CLASP1Q7Z460 1538 aa28.39■■■□□ 2.13
LDLRAD4-211ENST00000587757 ARID3CA6NKF2 412 aa28.38■■■□□ 2.13
LDLRAD4-211ENST00000587757 TIAM1Q13009 1591 aa28.38■■■□□ 2.13
LDLRAD4-211ENST00000587757 DIEXFQ68CQ4 756 aaKnown RBP28.35■■■□□ 2.13
LDLRAD4-211ENST00000587757 SHROOM2Q13796 1616 aa28.34■■■□□ 2.13
LDLRAD4-211ENST00000587757 LRRC9Q6ZRR7 1453 aa28.33■■■□□ 2.13
LDLRAD4-211ENST00000587757 PTPRGP23470 1445 aa28.32■■■□□ 2.12
LDLRAD4-211ENST00000587757 PLB1Q6P1J6 1458 aa28.31■■■□□ 2.12
LDLRAD4-211ENST00000587757 ERCC6L2Q5T890 1561 aa28.29■■■□□ 2.12
LDLRAD4-211ENST00000587757 EPRSP07814 1512 aaKnown RBP28.26■■■□□ 2.11
LDLRAD4-211ENST00000587757 NUP153P49790 1475 aaKnown RBP28.24■■■□□ 2.11
LDLRAD4-211ENST00000587757 HNRNPUL2Q1KMD3 747 aaKnown RBP28.23■■■□□ 2.11
LDLRAD4-211ENST00000587757 HECW1Q76N89 1606 aa28.23■■■□□ 2.11
LDLRAD4-211ENST00000587757 LRRIQ1Q96JM4 1722 aa28.22■■■□□ 2.11
LDLRAD4-211ENST00000587757 ACIN1Q9UKV3 1341 aaKnown RBP28.22■■■□□ 2.11
LDLRAD4-211ENST00000587757 MTUS2Q5JR59 1369 aa28.22■■■□□ 2.11
LDLRAD4-211ENST00000587757 CFAP43Q8NDM7 1665 aa28.21■■■□□ 2.11
LDLRAD4-211ENST00000587757 RAPGEF6Q8TEU7 1601 aa28.21■■■□□ 2.11
LDLRAD4-211ENST00000587757 CCDC18Q5T9S5 1454 aa28.2■■■□□ 2.11
LDLRAD4-211ENST00000587757 CDK13Q14004 1512 aaKnown RBP28.2■■■□□ 2.1
LDLRAD4-211ENST00000587757 NEUROD1Q13562 356 aa28.17■■■□□ 2.1
LDLRAD4-211ENST00000587757 ABCA8O94911 1581 aa28.15■■■□□ 2.1
LDLRAD4-211ENST00000587757 PHLDB1Q86UU1 1377 aa28.14■■■□□ 2.09
LDLRAD4-211ENST00000587757 ZNF316A6NFI3 1004 aaPredicted RBP28.13■■■□□ 2.09
LDLRAD4-211ENST00000587757 MAGI3Q5TCQ9 1506 aa28.12■■■□□ 2.09
LDLRAD4-211ENST00000587757 UACAQ9BZF9 1416 aa28.11■■■□□ 2.09
LDLRAD4-211ENST00000587757 CDK11AQ9UQ88 783 aaPredicted RBP28.11■■■□□ 2.09
LDLRAD4-211ENST00000587757 ATP10BO94823 1461 aa28.08■■■□□ 2.09
LDLRAD4-211ENST00000587757 RRBP1Q9P2E9 1410 aaKnown RBP28.05■■■□□ 2.08
LDLRAD4-211ENST00000587757 CCNB3Q8WWL7 1395 aa28.02■■■□□ 2.08
LDLRAD4-211ENST00000587757 PLEKHD1A6NEE1 506 aa28.02■■■□□ 2.08
LDLRAD4-211ENST00000587757 EHBP1L1Q8N3D4 1523 aa28.02■■■□□ 2.08
LDLRAD4-211ENST00000587757 NCOA2Q15596 1464 aa28.02■■■□□ 2.08
LDLRAD4-211ENST00000587757 CENPBP07199 599 aaPredicted RBP28.01■■■□□ 2.07
LDLRAD4-211ENST00000587757 PELP1Q8IZL8 1130 aaKnown RBP28■■■□□ 2.07
LDLRAD4-211ENST00000587757 ABCC2Q92887 1545 aa27.95■■■□□ 2.06
LDLRAD4-211ENST00000587757 FAM50AQ14320 339 aaKnown RBP27.94■■■□□ 2.06
LDLRAD4-211ENST00000587757 TROQ12816 1431 aaPredicted RBP27.94■■■□□ 2.06
LDLRAD4-211ENST00000587757 ITGAEP38570 1179 aa27.92■■■□□ 2.06
LDLRAD4-211ENST00000587757 SUPT6HQ7KZ85 1726 aaKnown RBP27.92■■■□□ 2.06
LDLRAD4-211ENST00000587757 ARHGEF11O15085 1522 aa27.91■■■□□ 2.06
LDLRAD4-211ENST00000587757 UHRF1BP1LA0JNW5 1464 aa27.9■■■□□ 2.06
LDLRAD4-211ENST00000587757 MYOM3Q5VTT5 1437 aa27.89■■■□□ 2.05
LDLRAD4-211ENST00000587757 FGD6Q6ZV73 1430 aa27.88■■■□□ 2.05
LDLRAD4-211ENST00000587757 GTF3C3Q9Y5Q9 886 aa27.87■■■□□ 2.05
LDLRAD4-211ENST00000587757 KDM5BQ9UGL1 1544 aa27.82■■■□□ 2.04
LDLRAD4-211ENST00000587757 KCNH8Q96L42 1107 aa27.79■■■□□ 2.04
LDLRAD4-211ENST00000587757 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.78■■■□□ 2.04
LDLRAD4-211ENST00000587757 ADCY10Q96PN6 1610 aa27.77■■■□□ 2.04
LDLRAD4-211ENST00000587757 DHX57Q6P158 1386 aaKnown RBP27.77■■■□□ 2.04
LDLRAD4-211ENST00000587757 CYB5RLQ6IPT4 315 aa27.76■■■□□ 2.03
LDLRAD4-211ENST00000587757 KIF14Q15058 1648 aa27.76■■■□□ 2.03
LDLRAD4-211ENST00000587757 MIER1Q8N108 512 aa27.75■■■□□ 2.03
LDLRAD4-211ENST00000587757 MIA2Q96PC5 1412 aa27.74■■■□□ 2.03
LDLRAD4-211ENST00000587757 CFDP1Q9UEE9 299 aaPredicted RBP27.73■■■□□ 2.03
LDLRAD4-211ENST00000587757 ZNF644Q9H582 1327 aaPredicted RBP27.73■■■□□ 2.03
LDLRAD4-211ENST00000587757 GPATCH8Q9UKJ3 1502 aaKnown RBP27.72■■■□□ 2.03
LDLRAD4-211ENST00000587757 ZCCHC11Q5TAX3 1644 aaKnown RBP27.72■■■□□ 2.03
LDLRAD4-211ENST00000587757 NPM1P06748 294 aaKnown RBP eCLIP27.71■■■□□ 2.03
LDLRAD4-211ENST00000587757 ABCC10Q5T3U5 1492 aa27.7■■■□□ 2.03
LDLRAD4-211ENST00000587757 CLSPNQ9HAW4 1339 aa27.7■■■□□ 2.03
LDLRAD4-211ENST00000587757 YTHDC1Q96MU7 727 aaKnown RBP27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms