RNA–Protein interactions for RNA: ENST00000587368.1

CHAF1A-204, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-204ENST00000587368 RAPGEF2Q9Y4G8 1499 aa22.98■■□□□ 1.27
CHAF1A-204ENST00000587368 SHROOM2Q13796 1616 aa22.98■■□□□ 1.27
CHAF1A-204ENST00000587368 PRG4Q92954 1404 aaPredicted RBP22.97■■□□□ 1.27
CHAF1A-204ENST00000587368 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
CHAF1A-204ENST00000587368 ERCC6L2Q5T890 1561 aa22.93■■□□□ 1.26
CHAF1A-204ENST00000587368 CSRNP3Q8WYN3 585 aa22.91■■□□□ 1.26
CHAF1A-204ENST00000587368 EEA1Q15075 1411 aa22.89■■□□□ 1.25
CHAF1A-204ENST00000587368 PRXQ9BXM0 1461 aa22.87■■□□□ 1.25
CHAF1A-204ENST00000587368 IQGAP2Q13576 1575 aa22.81■■□□□ 1.24
CHAF1A-204ENST00000587368 FAM9AQ8IZU1 332 aaPredicted RBP22.81■■□□□ 1.24
CHAF1A-204ENST00000587368 CARMIL2Q6F5E8 1435 aa22.8■■□□□ 1.24
CHAF1A-204ENST00000587368 TRHP20396 242 aaPredicted RBP22.74■■□□□ 1.23
CHAF1A-204ENST00000587368 TNIKQ9UKE5 1360 aa22.72■■□□□ 1.23
CHAF1A-204ENST00000587368 PTPRGP23470 1445 aa22.72■■□□□ 1.23
CHAF1A-204ENST00000587368 UGGT2Q9NYU1 1516 aa22.71■■□□□ 1.23
CHAF1A-204ENST00000587368 TTBK1Q5TCY1 1321 aaPredicted RBP22.69■■□□□ 1.22
CHAF1A-204ENST00000587368 NPM1P06748 294 aaKnown RBP eCLIP22.67■■□□□ 1.22
CHAF1A-204ENST00000587368 DISP1Q96F81 1524 aa22.67■■□□□ 1.22
CHAF1A-204ENST00000587368 CTTNBP2Q8WZ74 1663 aa22.65■■□□□ 1.22
CHAF1A-204ENST00000587368 GOLGA3Q08378 1498 aa22.62■■□□□ 1.21
CHAF1A-204ENST00000587368 KIAA0556O60303 1618 aa22.58■■□□□ 1.21
CHAF1A-204ENST00000587368 KIF21BO75037 1637 aa22.57■■□□□ 1.2
CHAF1A-204ENST00000587368 ADCY10Q96PN6 1610 aa22.54■■□□□ 1.2
CHAF1A-204ENST00000587368 UACAQ9BZF9 1416 aa22.54■■□□□ 1.2
CHAF1A-204ENST00000587368 UBTFP17480 764 aaKnown RBP22.52■■□□□ 1.2
CHAF1A-204ENST00000587368 UHRF1BP1LA0JNW5 1464 aa22.5■■□□□ 1.19
CHAF1A-204ENST00000587368 EHMT2Q96KQ7 1210 aa22.5■■□□□ 1.19
CHAF1A-204ENST00000587368 P3H3Q8IVL6 736 aa22.49■■□□□ 1.19
CHAF1A-204ENST00000587368 ABCC2Q92887 1545 aa22.48■■□□□ 1.19
CHAF1A-204ENST00000587368 RANGAP1P46060 587 aaPredicted RBP22.48■■□□□ 1.19
CHAF1A-204ENST00000587368 MAPKBP1O60336 1514 aa22.46■■□□□ 1.19
CHAF1A-204ENST00000587368 FAM69CQ0P6D2 419 aa22.41■■□□□ 1.18
CHAF1A-204ENST00000587368 PLB1Q6P1J6 1458 aa22.41■■□□□ 1.18
CHAF1A-204ENST00000587368 SAMD9Q5K651 1589 aa22.4■■□□□ 1.18
CHAF1A-204ENST00000587368 ABCC10Q5T3U5 1492 aa22.4■■□□□ 1.18
CHAF1A-204ENST00000587368 KDM5BQ9UGL1 1544 aa22.39■■□□□ 1.17
CHAF1A-204ENST00000587368 ABCA8O94911 1581 aa22.35■■□□□ 1.17
CHAF1A-204ENST00000587368 ASXL2Q76L83 1435 aa22.35■■□□□ 1.17
CHAF1A-204ENST00000587368 EFCAB5A4FU69 1503 aa22.33■■□□□ 1.17
CHAF1A-204ENST00000587368 FHOD3Q2V2M9 1422 aa22.32■■□□□ 1.16
CHAF1A-204ENST00000587368 DIP2BQ9P265 1576 aa22.29■■□□□ 1.16
CHAF1A-204ENST00000587368 KIF13AQ9H1H9 1805 aa22.29■■□□□ 1.16
CHAF1A-204ENST00000587368 ZCCHC11Q5TAX3 1644 aaKnown RBP22.28■■□□□ 1.16
CHAF1A-204ENST00000587368 ARID3CA6NKF2 412 aa22.25■■□□□ 1.15
CHAF1A-204ENST00000587368 ATP10BO94823 1461 aa22.22■■□□□ 1.15
CHAF1A-204ENST00000587368 ARHGAP35Q9NRY4 1499 aa22.22■■□□□ 1.15
CHAF1A-204ENST00000587368 WDR7Q9Y4E6 1490 aa22.22■■□□□ 1.15
CHAF1A-204ENST00000587368 RAPGEF6Q8TEU7 1601 aa22.21■■□□□ 1.15
CHAF1A-204ENST00000587368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.21■■□□□ 1.15
CHAF1A-204ENST00000587368 HNRNPUL2Q1KMD3 747 aaKnown RBP22.21■■□□□ 1.15
CHAF1A-204ENST00000587368 EPRSP07814 1512 aaKnown RBP22.2■■□□□ 1.14
CHAF1A-204ENST00000587368 GLI2P10070 1586 aa22.2■■□□□ 1.14
CHAF1A-204ENST00000587368 KCNH8Q96L42 1107 aa22.19■■□□□ 1.14
CHAF1A-204ENST00000587368 FMN1Q68DA7 1419 aa22.18■■□□□ 1.14
CHAF1A-204ENST00000587368 NUP153P49790 1475 aaKnown RBP22.16■■□□□ 1.14
CHAF1A-204ENST00000587368 ATP1B4Q9UN42 357 aaPredicted RBP22.12■■□□□ 1.13
CHAF1A-204ENST00000587368 PLEKHD1A6NEE1 506 aa22.1■■□□□ 1.13
CHAF1A-204ENST00000587368 CLIP1P30622 1438 aa22.1■■□□□ 1.13
CHAF1A-204ENST00000587368 TSPOAP1O95153 1857 aa22.09■■□□□ 1.13
CHAF1A-204ENST00000587368 CD109Q6YHK3 1445 aa22.06■■□□□ 1.12
CHAF1A-204ENST00000587368 MAP3K4Q9Y6R4 1608 aa22.04■■□□□ 1.12
CHAF1A-204ENST00000587368 TEX14Q8IWB6 1497 aa22.03■■□□□ 1.12
CHAF1A-204ENST00000587368 LOC105371045A0A1W2PR82 267 aa22.03■■□□□ 1.12
CHAF1A-204ENST00000587368 CDK11AQ9UQ88 783 aaPredicted RBP22.01■■□□□ 1.11
CHAF1A-204ENST00000587368 HECW1Q76N89 1606 aa22■■□□□ 1.11
CHAF1A-204ENST00000587368 MAGI3Q5TCQ9 1506 aa21.99■■□□□ 1.11
CHAF1A-204ENST00000587368 PPRC1Q5VV67 1664 aaKnown RBP21.98■■□□□ 1.11
CHAF1A-204ENST00000587368 CDK13Q14004 1512 aaKnown RBP21.98■■□□□ 1.11
CHAF1A-204ENST00000587368 KDM6BO15054 1643 aa21.98■■□□□ 1.11
CHAF1A-204ENST00000587368 CFAP43Q8NDM7 1665 aa21.98■■□□□ 1.11
CHAF1A-204ENST00000587368 CASKIN1Q8WXD9 1431 aa21.97■■□□□ 1.11
CHAF1A-204ENST00000587368 CEP162Q5TB80 1403 aa21.97■■□□□ 1.11
CHAF1A-204ENST00000587368 ABCA9Q8IUA7 1624 aa21.93■■□□□ 1.1
CHAF1A-204ENST00000587368 CCDC18Q5T9S5 1454 aa21.9■■□□□ 1.1
CHAF1A-204ENST00000587368 FYCO1Q9BQS8 1478 aa21.9■■□□□ 1.1
CHAF1A-204ENST00000587368 PCF11O94913 1555 aaKnown RBP21.89■■□□□ 1.09
CHAF1A-204ENST00000587368 PHLDB1Q86UU1 1377 aa21.88■■□□□ 1.09
CHAF1A-204ENST00000587368 COL17A1Q9UMD9 1497 aaPredicted RBP21.88■■□□□ 1.09
CHAF1A-204ENST00000587368 TROQ12816 1431 aaPredicted RBP21.86■■□□□ 1.09
CHAF1A-204ENST00000587368 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.84■■□□□ 1.09
CHAF1A-204ENST00000587368 NEO1Q92859 1461 aa21.82■■□□□ 1.08
CHAF1A-204ENST00000587368 ARAP3Q8WWN8 1544 aa21.8■■□□□ 1.08
CHAF1A-204ENST00000587368 LRRIQ1Q96JM4 1722 aa21.79■■□□□ 1.08
CHAF1A-204ENST00000587368 TTC37Q6PGP7 1564 aa21.78■■□□□ 1.08
CHAF1A-204ENST00000587368 PLCH2O75038 1416 aa21.77■■□□□ 1.08
CHAF1A-204ENST00000587368 KIF14Q15058 1648 aa21.76■■□□□ 1.07
CHAF1A-204ENST00000587368 FANCAO15360 1455 aa21.76■■□□□ 1.07
CHAF1A-204ENST00000587368 EFCAB2Q5VUJ9 269 aa21.75■■□□□ 1.07
CHAF1A-204ENST00000587368 AKNAQ7Z591 1439 aa21.74■■□□□ 1.07
CHAF1A-204ENST00000587368 RAPGEF3O95398 923 aa21.73■■□□□ 1.07
CHAF1A-204ENST00000587368 MTUS2Q5JR59 1369 aa21.71■■□□□ 1.07
CHAF1A-204ENST00000587368 VPS8Q8N3P4 1428 aa21.71■■□□□ 1.07
CHAF1A-204ENST00000587368 CFAP74Q9C0B2 1584 aa21.7■■□□□ 1.06
CHAF1A-204ENST00000587368 DENND4BO75064 1496 aaPredicted RBP21.69■■□□□ 1.06
CHAF1A-204ENST00000587368 AEBP2Q6ZN18 517 aaPredicted RBP21.65■■□□□ 1.06
CHAF1A-204ENST00000587368 MYO5CQ9NQX4 1742 aa21.65■■□□□ 1.06
CHAF1A-204ENST00000587368 ADGRL1O94910 1474 aa21.64■■□□□ 1.06
CHAF1A-204ENST00000587368 SCAPERQ9BY12 1400 aa21.64■■□□□ 1.06
CHAF1A-204ENST00000587368 ARHGAP5Q13017 1502 aa21.64■■□□□ 1.05
CHAF1A-204ENST00000587368 CCNB3Q8WWL7 1395 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms