RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 CUL7Q14999 1698 aa26.63■■□□□ 1.85
PRKCSH-204ENST00000587290 IGF1RP08069 1367 aa26.63■■□□□ 1.85
PRKCSH-204ENST00000587290 KIF13AQ9H1H9 1805 aa26.6■■□□□ 1.85
PRKCSH-204ENST00000587290 KIAA0586Q9BVV6 1533 aa26.53■■□□□ 1.84
PRKCSH-204ENST00000587290 ADCY10Q96PN6 1610 aa26.5■■□□□ 1.83
PRKCSH-204ENST00000587290 CARMIL1Q5VZK9 1371 aa26.46■■□□□ 1.83
PRKCSH-204ENST00000587290 MAPKBP1O60336 1514 aa26.37■■□□□ 1.81
PRKCSH-204ENST00000587290 TTBK1Q5TCY1 1321 aaPredicted RBP26.37■■□□□ 1.81
PRKCSH-204ENST00000587290 DIP2BQ9P265 1576 aa26.36■■□□□ 1.81
PRKCSH-204ENST00000587290 IQGAP2Q13576 1575 aa26.35■■□□□ 1.81
PRKCSH-204ENST00000587290 ABCC10Q5T3U5 1492 aa26.35■■□□□ 1.81
PRKCSH-204ENST00000587290 NPM1P06748 294 aaKnown RBP eCLIP26.33■■□□□ 1.81
PRKCSH-204ENST00000587290 FAM69CQ0P6D2 419 aa26.32■■□□□ 1.8
PRKCSH-204ENST00000587290 TSPOAP1O95153 1857 aa26.28■■□□□ 1.8
PRKCSH-204ENST00000587290 PTPRGP23470 1445 aa26.28■■□□□ 1.8
PRKCSH-204ENST00000587290 AEBP2Q6ZN18 517 aaPredicted RBP26.25■■□□□ 1.79
PRKCSH-204ENST00000587290 CARMIL2Q6F5E8 1435 aa26.23■■□□□ 1.79
PRKCSH-204ENST00000587290 RAPGEF2Q9Y4G8 1499 aa26.23■■□□□ 1.79
PRKCSH-204ENST00000587290 TNIKQ9UKE5 1360 aa26.22■■□□□ 1.79
PRKCSH-204ENST00000587290 DISP1Q96F81 1524 aa26.22■■□□□ 1.79
PRKCSH-204ENST00000587290 ABCC2Q92887 1545 aa26.17■■□□□ 1.78
PRKCSH-204ENST00000587290 UGGT2Q9NYU1 1516 aa26.14■■□□□ 1.78
PRKCSH-204ENST00000587290 CTTNBP2Q8WZ74 1663 aa26.14■■□□□ 1.78
PRKCSH-204ENST00000587290 KIAA0556O60303 1618 aa26.13■■□□□ 1.77
PRKCSH-204ENST00000587290 KDM6BO15054 1643 aa26.12■■□□□ 1.77
PRKCSH-204ENST00000587290 ASXL2Q76L83 1435 aa26.1■■□□□ 1.77
PRKCSH-204ENST00000587290 UACAQ9BZF9 1416 aa26.09■■□□□ 1.77
PRKCSH-204ENST00000587290 UHRF1BP1LA0JNW5 1464 aa26.08■■□□□ 1.77
PRKCSH-204ENST00000587290 PPRC1Q5VV67 1664 aaKnown RBP26.06■■□□□ 1.76
PRKCSH-204ENST00000587290 ZCCHC11Q5TAX3 1644 aaKnown RBP26.04■■□□□ 1.76
PRKCSH-204ENST00000587290 PLB1Q6P1J6 1458 aa26.01■■□□□ 1.75
PRKCSH-204ENST00000587290 KDM5BQ9UGL1 1544 aa25.99■■□□□ 1.75
PRKCSH-204ENST00000587290 GLI2P10070 1586 aa25.99■■□□□ 1.75
PRKCSH-204ENST00000587290 PRXQ9BXM0 1461 aa25.97■■□□□ 1.75
PRKCSH-204ENST00000587290 EPRSP07814 1512 aaKnown RBP25.93■■□□□ 1.74
PRKCSH-204ENST00000587290 MAP3K4Q9Y6R4 1608 aa25.92■■□□□ 1.74
PRKCSH-204ENST00000587290 ABCA8O94911 1581 aa25.87■■□□□ 1.73
PRKCSH-204ENST00000587290 GOLGA3Q08378 1498 aa25.87■■□□□ 1.73
PRKCSH-204ENST00000587290 WDR7Q9Y4E6 1490 aa25.84■■□□□ 1.73
PRKCSH-204ENST00000587290 COL17A1Q9UMD9 1497 aaPredicted RBP25.82■■□□□ 1.72
PRKCSH-204ENST00000587290 KDM4FA0A1W2PPD8 638 aa25.81■■□□□ 1.72
PRKCSH-204ENST00000587290 P3H3Q8IVL6 736 aa25.78■■□□□ 1.72
PRKCSH-204ENST00000587290 ARID3CA6NKF2 412 aa25.75■■□□□ 1.71
PRKCSH-204ENST00000587290 TEX14Q8IWB6 1497 aa25.74■■□□□ 1.71
PRKCSH-204ENST00000587290 CSRNP3Q8WYN3 585 aa25.72■■□□□ 1.71
PRKCSH-204ENST00000587290 CFAP43Q8NDM7 1665 aa25.71■■□□□ 1.71
PRKCSH-204ENST00000587290 SAMD9Q5K651 1589 aa25.71■■□□□ 1.71
PRKCSH-204ENST00000587290 KCNH8Q96L42 1107 aa25.71■■□□□ 1.71
PRKCSH-204ENST00000587290 CD109Q6YHK3 1445 aa25.65■■□□□ 1.7
PRKCSH-204ENST00000587290 FAM9AQ8IZU1 332 aaPredicted RBP25.65■■□□□ 1.7
PRKCSH-204ENST00000587290 ADGRL1O94910 1474 aa25.65■■□□□ 1.7
PRKCSH-204ENST00000587290 RANGAP1P46060 587 aaPredicted RBP25.64■■□□□ 1.7
PRKCSH-204ENST00000587290 ATP10BO94823 1461 aa25.63■■□□□ 1.69
PRKCSH-204ENST00000587290 MAGI3Q5TCQ9 1506 aa25.62■■□□□ 1.69
PRKCSH-204ENST00000587290 RAPGEF6Q8TEU7 1601 aa25.61■■□□□ 1.69
PRKCSH-204ENST00000587290 EEA1Q15075 1411 aa25.58■■□□□ 1.69
PRKCSH-204ENST00000587290 FHOD3Q2V2M9 1422 aa25.55■■□□□ 1.68
PRKCSH-204ENST00000587290 ABCA9Q8IUA7 1624 aa25.52■■□□□ 1.68
PRKCSH-204ENST00000587290 KIF21BO75037 1637 aa25.51■■□□□ 1.67
PRKCSH-204ENST00000587290 NUP153P49790 1475 aaKnown RBP25.5■■□□□ 1.67
PRKCSH-204ENST00000587290 EHMT2Q96KQ7 1210 aa25.47■■□□□ 1.67
PRKCSH-204ENST00000587290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.46■■□□□ 1.67
PRKCSH-204ENST00000587290 HNRNPUL2Q1KMD3 747 aaKnown RBP25.46■■□□□ 1.67
PRKCSH-204ENST00000587290 ARAP3Q8WWN8 1544 aa25.42■■□□□ 1.66
PRKCSH-204ENST00000587290 EFCAB5A4FU69 1503 aa25.39■■□□□ 1.66
PRKCSH-204ENST00000587290 FRMPD1Q5SYB0 1578 aa25.35■■□□□ 1.65
PRKCSH-204ENST00000587290 RAPGEF3O95398 923 aa25.33■■□□□ 1.65
PRKCSH-204ENST00000587290 CDK13Q14004 1512 aaKnown RBP25.32■■□□□ 1.64
PRKCSH-204ENST00000587290 HECW2Q9P2P5 1572 aa25.32■■□□□ 1.64
PRKCSH-204ENST00000587290 CHIC1Q5VXU3 224 aa25.32■■□□□ 1.64
PRKCSH-204ENST00000587290 NEO1Q92859 1461 aa25.31■■□□□ 1.64
PRKCSH-204ENST00000587290 TTC37Q6PGP7 1564 aa25.31■■□□□ 1.64
PRKCSH-204ENST00000587290 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.27■■□□□ 1.64
PRKCSH-204ENST00000587290 UBTFP17480 764 aaKnown RBP25.27■■□□□ 1.64
PRKCSH-204ENST00000587290 PLEKHD1A6NEE1 506 aa25.25■■□□□ 1.63
PRKCSH-204ENST00000587290 PHLDB1Q86UU1 1377 aa25.25■■□□□ 1.63
PRKCSH-204ENST00000587290 RICTORQ6R327 1708 aa25.23■■□□□ 1.63
PRKCSH-204ENST00000587290 ARHGAP35Q9NRY4 1499 aa25.23■■□□□ 1.63
PRKCSH-204ENST00000587290 FANCAO15360 1455 aa25.2■■□□□ 1.62
PRKCSH-204ENST00000587290 ADAMTSL3P82987 1691 aa25.2■■□□□ 1.62
PRKCSH-204ENST00000587290 CFAP74Q9C0B2 1584 aa25.18■■□□□ 1.62
PRKCSH-204ENST00000587290 ATP1B4Q9UN42 357 aaPredicted RBP25.18■■□□□ 1.62
PRKCSH-204ENST00000587290 HECW1Q76N89 1606 aa25.18■■□□□ 1.62
PRKCSH-204ENST00000587290 AKNAQ7Z591 1439 aa25.17■■□□□ 1.62
PRKCSH-204ENST00000587290 LRRIQ1Q96JM4 1722 aa25.17■■□□□ 1.62
PRKCSH-204ENST00000587290 ARHGEF40Q8TER5 1519 aa25.17■■□□□ 1.62
PRKCSH-204ENST00000587290 BCORL1Q5H9F3 1711 aa25.16■■□□□ 1.62
PRKCSH-204ENST00000587290 DENND4BO75064 1496 aaPredicted RBP25.15■■□□□ 1.62
PRKCSH-204ENST00000587290 MADDQ8WXG6 1647 aa25.13■■□□□ 1.61
PRKCSH-204ENST00000587290 FMN1Q68DA7 1419 aa25.12■■□□□ 1.61
PRKCSH-204ENST00000587290 SIGLEC1Q9BZZ2 1709 aa25.12■■□□□ 1.61
PRKCSH-204ENST00000587290 KIF14Q15058 1648 aa25.12■■□□□ 1.61
PRKCSH-204ENST00000587290 PTPRMP28827 1452 aa25.1■■□□□ 1.61
PRKCSH-204ENST00000587290 ARID4BQ4LE39 1312 aaPredicted RBP25.1■■□□□ 1.61
PRKCSH-204ENST00000587290 MYO5CQ9NQX4 1742 aa25.09■■□□□ 1.61
PRKCSH-204ENST00000587290 RIMS1Q86UR5 1692 aaKnown RBP25.07■■□□□ 1.6
PRKCSH-204ENST00000587290 ZMYM4Q5VZL5 1548 aa25.07■■□□□ 1.6
PRKCSH-204ENST00000587290 YEATS2Q9ULM3 1422 aa25.06■■□□□ 1.6
PRKCSH-204ENST00000587290 ZFYVE16Q7Z3T8 1539 aa25.04■■□□□ 1.6
PRKCSH-204ENST00000587290 PLCH2O75038 1416 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms