RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 KIAA0586Q9BVV6 1533 aa25.04■■□□□ 1.6
ATG4D-207ENST00000587256 PRG4Q92954 1404 aaPredicted RBP25.03■■□□□ 1.6
ATG4D-207ENST00000587256 RAPGEF2Q9Y4G8 1499 aa25.02■■□□□ 1.6
ATG4D-207ENST00000587256 JPH4Q96JJ6 628 aa25■■□□□ 1.59
ATG4D-207ENST00000587256 IQGAP2Q13576 1575 aa24.93■■□□□ 1.58
ATG4D-207ENST00000587256 PRXQ9BXM0 1461 aa24.88■■□□□ 1.57
ATG4D-207ENST00000587256 EEA1Q15075 1411 aa24.86■■□□□ 1.57
ATG4D-207ENST00000587256 CHIC1Q5VXU3 224 aa24.85■■□□□ 1.57
ATG4D-207ENST00000587256 CTTNBP2Q8WZ74 1663 aa24.82■■□□□ 1.56
ATG4D-207ENST00000587256 CARMIL2Q6F5E8 1435 aa24.81■■□□□ 1.56
ATG4D-207ENST00000587256 CSRNP3Q8WYN3 585 aa24.8■■□□□ 1.56
ATG4D-207ENST00000587256 UGGT2Q9NYU1 1516 aa24.76■■□□□ 1.55
ATG4D-207ENST00000587256 TRHP20396 242 aaPredicted RBP24.75■■□□□ 1.55
ATG4D-207ENST00000587256 FAM9AQ8IZU1 332 aaPredicted RBP24.75■■□□□ 1.55
ATG4D-207ENST00000587256 DISP1Q96F81 1524 aa24.71■■□□□ 1.55
ATG4D-207ENST00000587256 PTPRGP23470 1445 aa24.7■■□□□ 1.55
ATG4D-207ENST00000587256 TNIKQ9UKE5 1360 aa24.7■■□□□ 1.55
ATG4D-207ENST00000587256 KIAA0556O60303 1618 aa24.7■■□□□ 1.54
ATG4D-207ENST00000587256 TTBK1Q5TCY1 1321 aaPredicted RBP24.69■■□□□ 1.54
ATG4D-207ENST00000587256 ADCY10Q96PN6 1610 aa24.68■■□□□ 1.54
ATG4D-207ENST00000587256 KIF21BO75037 1637 aa24.64■■□□□ 1.53
ATG4D-207ENST00000587256 GOLGA3Q08378 1498 aa24.64■■□□□ 1.53
ATG4D-207ENST00000587256 NPM1P06748 294 aaKnown RBP eCLIP24.6■■□□□ 1.53
ATG4D-207ENST00000587256 MAPKBP1O60336 1514 aa24.54■■□□□ 1.52
ATG4D-207ENST00000587256 UACAQ9BZF9 1416 aa24.53■■□□□ 1.52
ATG4D-207ENST00000587256 ABCC2Q92887 1545 aa24.52■■□□□ 1.52
ATG4D-207ENST00000587256 UHRF1BP1LA0JNW5 1464 aa24.51■■□□□ 1.51
ATG4D-207ENST00000587256 SAMD9Q5K651 1589 aa24.48■■□□□ 1.51
ATG4D-207ENST00000587256 EHMT2Q96KQ7 1210 aa24.46■■□□□ 1.51
ATG4D-207ENST00000587256 RANGAP1P46060 587 aaPredicted RBP24.44■■□□□ 1.5
ATG4D-207ENST00000587256 KIF13AQ9H1H9 1805 aa24.44■■□□□ 1.5
ATG4D-207ENST00000587256 PLB1Q6P1J6 1458 aa24.44■■□□□ 1.5
ATG4D-207ENST00000587256 P3H3Q8IVL6 736 aa24.42■■□□□ 1.5
ATG4D-207ENST00000587256 ABCC10Q5T3U5 1492 aa24.42■■□□□ 1.5
ATG4D-207ENST00000587256 DIP2BQ9P265 1576 aa24.42■■□□□ 1.5
ATG4D-207ENST00000587256 UBTFP17480 764 aaKnown RBP24.4■■□□□ 1.5
ATG4D-207ENST00000587256 ABCA8O94911 1581 aa24.4■■□□□ 1.5
ATG4D-207ENST00000587256 KDM5BQ9UGL1 1544 aa24.4■■□□□ 1.5
ATG4D-207ENST00000587256 ZCCHC11Q5TAX3 1644 aaKnown RBP24.39■■□□□ 1.49
ATG4D-207ENST00000587256 ASXL2Q76L83 1435 aa24.37■■□□□ 1.49
ATG4D-207ENST00000587256 EFCAB5A4FU69 1503 aa24.37■■□□□ 1.49
ATG4D-207ENST00000587256 FAM69CQ0P6D2 419 aa24.36■■□□□ 1.49
ATG4D-207ENST00000587256 FHOD3Q2V2M9 1422 aa24.34■■□□□ 1.49
ATG4D-207ENST00000587256 RAPGEF6Q8TEU7 1601 aa24.28■■□□□ 1.48
ATG4D-207ENST00000587256 WDR7Q9Y4E6 1490 aa24.25■■□□□ 1.47
ATG4D-207ENST00000587256 GLI2P10070 1586 aa24.22■■□□□ 1.47
ATG4D-207ENST00000587256 EPRSP07814 1512 aaKnown RBP24.22■■□□□ 1.47
ATG4D-207ENST00000587256 ARID3CA6NKF2 412 aa24.22■■□□□ 1.47
ATG4D-207ENST00000587256 TSPOAP1O95153 1857 aa24.19■■□□□ 1.46
ATG4D-207ENST00000587256 ARHGAP35Q9NRY4 1499 aa24.19■■□□□ 1.46
ATG4D-207ENST00000587256 ATP10BO94823 1461 aa24.17■■□□□ 1.46
ATG4D-207ENST00000587256 NUP153P49790 1475 aaKnown RBP24.17■■□□□ 1.46
ATG4D-207ENST00000587256 FMN1Q68DA7 1419 aa24.13■■□□□ 1.45
ATG4D-207ENST00000587256 MAP3K4Q9Y6R4 1608 aa24.13■■□□□ 1.45
ATG4D-207ENST00000587256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.12■■□□□ 1.45
ATG4D-207ENST00000587256 HNRNPUL2Q1KMD3 747 aaKnown RBP24.12■■□□□ 1.45
ATG4D-207ENST00000587256 PPRC1Q5VV67 1664 aaKnown RBP24.09■■□□□ 1.45
ATG4D-207ENST00000587256 KCNH8Q96L42 1107 aa24.08■■□□□ 1.45
ATG4D-207ENST00000587256 KDM6BO15054 1643 aa24.07■■□□□ 1.44
ATG4D-207ENST00000587256 HECW1Q76N89 1606 aa24.07■■□□□ 1.44
ATG4D-207ENST00000587256 CFAP43Q8NDM7 1665 aa24.05■■□□□ 1.44
ATG4D-207ENST00000587256 TEX14Q8IWB6 1497 aa24.05■■□□□ 1.44
ATG4D-207ENST00000587256 CLIP1P30622 1438 aa24.04■■□□□ 1.44
ATG4D-207ENST00000587256 CDK13Q14004 1512 aaKnown RBP24.01■■□□□ 1.43
ATG4D-207ENST00000587256 ATP1B4Q9UN42 357 aaPredicted RBP24.01■■□□□ 1.43
ATG4D-207ENST00000587256 CD109Q6YHK3 1445 aa24.01■■□□□ 1.43
ATG4D-207ENST00000587256 ABCA9Q8IUA7 1624 aa23.97■■□□□ 1.43
ATG4D-207ENST00000587256 PCF11O94913 1555 aaKnown RBP23.96■■□□□ 1.43
ATG4D-207ENST00000587256 MAGI3Q5TCQ9 1506 aa23.96■■□□□ 1.43
ATG4D-207ENST00000587256 PLEKHD1A6NEE1 506 aa23.95■■□□□ 1.42
ATG4D-207ENST00000587256 CEP162Q5TB80 1403 aa23.91■■□□□ 1.42
ATG4D-207ENST00000587256 CASKIN1Q8WXD9 1431 aa23.91■■□□□ 1.42
ATG4D-207ENST00000587256 FYCO1Q9BQS8 1478 aa23.88■■□□□ 1.41
ATG4D-207ENST00000587256 LRRIQ1Q96JM4 1722 aa23.87■■□□□ 1.41
ATG4D-207ENST00000587256 CCDC18Q5T9S5 1454 aa23.87■■□□□ 1.41
ATG4D-207ENST00000587256 CDK11AQ9UQ88 783 aaPredicted RBP23.85■■□□□ 1.41
ATG4D-207ENST00000587256 TTC37Q6PGP7 1564 aa23.84■■□□□ 1.41
ATG4D-207ENST00000587256 COL17A1Q9UMD9 1497 aaPredicted RBP23.84■■□□□ 1.41
ATG4D-207ENST00000587256 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.84■■□□□ 1.41
ATG4D-207ENST00000587256 LOC105371045A0A1W2PR82 267 aa23.81■■□□□ 1.4
ATG4D-207ENST00000587256 KIF14Q15058 1648 aa23.81■■□□□ 1.4
ATG4D-207ENST00000587256 TROQ12816 1431 aaPredicted RBP23.79■■□□□ 1.4
ATG4D-207ENST00000587256 NEO1Q92859 1461 aa23.78■■□□□ 1.4
ATG4D-207ENST00000587256 PHLDB1Q86UU1 1377 aa23.76■■□□□ 1.39
ATG4D-207ENST00000587256 ARAP3Q8WWN8 1544 aa23.75■■□□□ 1.39
ATG4D-207ENST00000587256 CFAP74Q9C0B2 1584 aa23.75■■□□□ 1.39
ATG4D-207ENST00000587256 FANCAO15360 1455 aa23.73■■□□□ 1.39
ATG4D-207ENST00000587256 MYO5CQ9NQX4 1742 aa23.71■■□□□ 1.39
ATG4D-207ENST00000587256 PLCH2O75038 1416 aa23.67■■□□□ 1.38
ATG4D-207ENST00000587256 AKNAQ7Z591 1439 aa23.66■■□□□ 1.38
ATG4D-207ENST00000587256 ARHGAP5Q13017 1502 aa23.63■■□□□ 1.37
ATG4D-207ENST00000587256 FRMPD1Q5SYB0 1578 aa23.62■■□□□ 1.37
ATG4D-207ENST00000587256 VPS8Q8N3P4 1428 aa23.62■■□□□ 1.37
ATG4D-207ENST00000587256 DENND4BO75064 1496 aaPredicted RBP23.62■■□□□ 1.37
ATG4D-207ENST00000587256 ADGRL1O94910 1474 aa23.62■■□□□ 1.37
ATG4D-207ENST00000587256 RAPGEF3O95398 923 aa23.61■■□□□ 1.37
ATG4D-207ENST00000587256 MTUS2Q5JR59 1369 aa23.6■■□□□ 1.37
ATG4D-207ENST00000587256 PREX2Q70Z35 1606 aa23.59■■□□□ 1.37
ATG4D-207ENST00000587256 AEBP2Q6ZN18 517 aaPredicted RBP23.59■■□□□ 1.37
ATG4D-207ENST00000587256 EFCAB2Q5VUJ9 269 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms