RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 KIAA0586Q9BVV6 1533 aa28.39■■■□□ 2.14
VAT1-204ENST00000587147 PRXQ9BXM0 1461 aa28.34■■■□□ 2.13
VAT1-204ENST00000587147 ARAP1Q96P48 1450 aa28.32■■■□□ 2.12
VAT1-204ENST00000587147 JPH4Q96JJ6 628 aa28.27■■■□□ 2.12
VAT1-204ENST00000587147 CSRNP3Q8WYN3 585 aa28.26■■■□□ 2.11
VAT1-204ENST00000587147 IQGAP2Q13576 1575 aa28.23■■■□□ 2.11
VAT1-204ENST00000587147 PRG4Q92954 1404 aaPredicted RBP28.21■■■□□ 2.11
VAT1-204ENST00000587147 CYB5RLQ6IPT4 315 aa28.18■■■□□ 2.1
VAT1-204ENST00000587147 ERCC6L2Q5T890 1561 aa28.18■■■□□ 2.1
VAT1-204ENST00000587147 CTTNBP2Q8WZ74 1663 aa28.16■■■□□ 2.1
VAT1-204ENST00000587147 UGGT2Q9NYU1 1516 aa28.11■■■□□ 2.09
VAT1-204ENST00000587147 KIF21BO75037 1637 aa28.1■■■□□ 2.09
VAT1-204ENST00000587147 CARMIL2Q6F5E8 1435 aa28.09■■■□□ 2.09
VAT1-204ENST00000587147 DISP1Q96F81 1524 aa27.99■■■□□ 2.07
VAT1-204ENST00000587147 FAM9AQ8IZU1 332 aaPredicted RBP27.98■■■□□ 2.07
VAT1-204ENST00000587147 GOLGA3Q08378 1498 aa27.97■■■□□ 2.07
VAT1-204ENST00000587147 TNIKQ9UKE5 1360 aa27.96■■■□□ 2.07
VAT1-204ENST00000587147 KIAA0556O60303 1618 aa27.95■■■□□ 2.06
VAT1-204ENST00000587147 PTPRGP23470 1445 aa27.9■■■□□ 2.06
VAT1-204ENST00000587147 SAMD9Q5K651 1589 aa27.82■■■□□ 2.04
VAT1-204ENST00000587147 ADCY10Q96PN6 1610 aa27.81■■■□□ 2.04
VAT1-204ENST00000587147 UHRF1BP1LA0JNW5 1464 aa27.79■■■□□ 2.04
VAT1-204ENST00000587147 EFCAB5A4FU69 1503 aa27.75■■■□□ 2.03
VAT1-204ENST00000587147 UACAQ9BZF9 1416 aa27.75■■■□□ 2.03
VAT1-204ENST00000587147 ABCC2Q92887 1545 aa27.72■■■□□ 2.03
VAT1-204ENST00000587147 MAPKBP1O60336 1514 aa27.71■■■□□ 2.03
VAT1-204ENST00000587147 NPM1P06748 294 aaKnown RBP eCLIP27.7■■■□□ 2.02
VAT1-204ENST00000587147 UBTFP17480 764 aaKnown RBP27.7■■■□□ 2.02
VAT1-204ENST00000587147 ABCA8O94911 1581 aa27.65■■■□□ 2.02
VAT1-204ENST00000587147 KDM5BQ9UGL1 1544 aa27.62■■■□□ 2.01
VAT1-204ENST00000587147 TTBK1Q5TCY1 1321 aaPredicted RBP27.61■■■□□ 2.01
VAT1-204ENST00000587147 PLB1Q6P1J6 1458 aa27.59■■■□□ 2.01
VAT1-204ENST00000587147 TRHP20396 242 aaPredicted RBP27.57■■■□□ 2
VAT1-204ENST00000587147 ZCCHC11Q5TAX3 1644 aaKnown RBP27.52■■■□□ 2
VAT1-204ENST00000587147 FHOD3Q2V2M9 1422 aa27.52■■■□□ 2
VAT1-204ENST00000587147 P3H3Q8IVL6 736 aa27.52■■■□□ 2
VAT1-204ENST00000587147 ABCC10Q5T3U5 1492 aa27.51■■■□□ 2
VAT1-204ENST00000587147 ARHGAP35Q9NRY4 1499 aa27.51■■□□□ 1.99
VAT1-204ENST00000587147 RAPGEF6Q8TEU7 1601 aa27.5■■□□□ 1.99
VAT1-204ENST00000587147 EHMT2Q96KQ7 1210 aa27.5■■□□□ 1.99
VAT1-204ENST00000587147 KIF13AQ9H1H9 1805 aa27.48■■□□□ 1.99
VAT1-204ENST00000587147 DIP2BQ9P265 1576 aa27.47■■□□□ 1.99
VAT1-204ENST00000587147 RANGAP1P46060 587 aaPredicted RBP27.46■■□□□ 1.99
VAT1-204ENST00000587147 FMN1Q68DA7 1419 aa27.46■■□□□ 1.99
VAT1-204ENST00000587147 ASXL2Q76L83 1435 aa27.46■■□□□ 1.99
VAT1-204ENST00000587147 GLI2P10070 1586 aa27.39■■□□□ 1.98
VAT1-204ENST00000587147 NUP153P49790 1475 aaKnown RBP27.38■■□□□ 1.97
VAT1-204ENST00000587147 WDR7Q9Y4E6 1490 aa27.38■■□□□ 1.97
VAT1-204ENST00000587147 ATP10BO94823 1461 aa27.37■■□□□ 1.97
VAT1-204ENST00000587147 CLIP1P30622 1438 aa27.36■■□□□ 1.97
VAT1-204ENST00000587147 FAM69CQ0P6D2 419 aa27.35■■□□□ 1.97
VAT1-204ENST00000587147 EPRSP07814 1512 aaKnown RBP27.32■■□□□ 1.96
VAT1-204ENST00000587147 HECW1Q76N89 1606 aa27.31■■□□□ 1.96
VAT1-204ENST00000587147 CEP162Q5TB80 1403 aa27.24■■□□□ 1.95
VAT1-204ENST00000587147 MAP3K4Q9Y6R4 1608 aa27.23■■□□□ 1.95
VAT1-204ENST00000587147 CASKIN1Q8WXD9 1431 aa27.23■■□□□ 1.95
VAT1-204ENST00000587147 CFAP43Q8NDM7 1665 aa27.2■■□□□ 1.94
VAT1-204ENST00000587147 FYCO1Q9BQS8 1478 aa27.19■■□□□ 1.94
VAT1-204ENST00000587147 PCF11O94913 1555 aaKnown RBP27.17■■□□□ 1.94
VAT1-204ENST00000587147 CCDC18Q5T9S5 1454 aa27.15■■□□□ 1.94
VAT1-204ENST00000587147 LOC105371045A0A1W2PR82 267 aa27.15■■□□□ 1.94
VAT1-204ENST00000587147 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.15■■□□□ 1.94
VAT1-204ENST00000587147 HNRNPUL2Q1KMD3 747 aaKnown RBP27.15■■□□□ 1.94
VAT1-204ENST00000587147 PLEKHD1A6NEE1 506 aa27.14■■□□□ 1.94
VAT1-204ENST00000587147 ARID3CA6NKF2 412 aa27.14■■□□□ 1.94
VAT1-204ENST00000587147 PPRC1Q5VV67 1664 aaKnown RBP27.14■■□□□ 1.93
VAT1-204ENST00000587147 TEX14Q8IWB6 1497 aa27.13■■□□□ 1.93
VAT1-204ENST00000587147 ABCA9Q8IUA7 1624 aa27.13■■□□□ 1.93
VAT1-204ENST00000587147 CDK13Q14004 1512 aaKnown RBP27.12■■□□□ 1.93
VAT1-204ENST00000587147 CDK11AQ9UQ88 783 aaPredicted RBP27.12■■□□□ 1.93
VAT1-204ENST00000587147 TSPOAP1O95153 1857 aa27.12■■□□□ 1.93
VAT1-204ENST00000587147 MAGI3Q5TCQ9 1506 aa27.11■■□□□ 1.93
VAT1-204ENST00000587147 KCNH8Q96L42 1107 aa27.09■■□□□ 1.93
VAT1-204ENST00000587147 CD109Q6YHK3 1445 aa27.08■■□□□ 1.93
VAT1-204ENST00000587147 LRRIQ1Q96JM4 1722 aa27.08■■□□□ 1.93
VAT1-204ENST00000587147 ATP1B4Q9UN42 357 aaPredicted RBP27.05■■□□□ 1.92
VAT1-204ENST00000587147 TROQ12816 1431 aaPredicted RBP27■■□□□ 1.91
VAT1-204ENST00000587147 KDM6BO15054 1643 aa27■■□□□ 1.91
VAT1-204ENST00000587147 PHLDB1Q86UU1 1377 aa26.98■■□□□ 1.91
VAT1-204ENST00000587147 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.97■■□□□ 1.915e-8■■■■■ 28.6
VAT1-204ENST00000587147 KIF14Q15058 1648 aa26.96■■□□□ 1.91
VAT1-204ENST00000587147 VPS8Q8N3P4 1428 aa26.96■■□□□ 1.91
VAT1-204ENST00000587147 NEO1Q92859 1461 aa26.93■■□□□ 1.9
VAT1-204ENST00000587147 TTC37Q6PGP7 1564 aa26.92■■□□□ 1.9
VAT1-204ENST00000587147 ARAP3Q8WWN8 1544 aa26.9■■□□□ 1.9
VAT1-204ENST00000587147 CFAP74Q9C0B2 1584 aa26.9■■□□□ 1.9
VAT1-204ENST00000587147 MYO5CQ9NQX4 1742 aa26.85■■□□□ 1.89
VAT1-204ENST00000587147 PLCH2O75038 1416 aa26.84■■□□□ 1.89
VAT1-204ENST00000587147 MAP3K1Q13233 1512 aa26.83■■□□□ 1.89
VAT1-204ENST00000587147 FANCAO15360 1455 aa26.81■■□□□ 1.88
VAT1-204ENST00000587147 COL17A1Q9UMD9 1497 aaPredicted RBP26.81■■□□□ 1.88
VAT1-204ENST00000587147 EHBP1L1Q8N3D4 1523 aa26.8■■□□□ 1.88
VAT1-204ENST00000587147 TIAM1Q13009 1591 aa26.79■■□□□ 1.88
VAT1-204ENST00000587147 MTUS2Q5JR59 1369 aa26.78■■□□□ 1.88
VAT1-204ENST00000587147 PREX2Q70Z35 1606 aa26.75■■□□□ 1.87
VAT1-204ENST00000587147 AKNAQ7Z591 1439 aa26.74■■□□□ 1.87
VAT1-204ENST00000587147 EFCAB2Q5VUJ9 269 aa26.71■■□□□ 1.87
VAT1-204ENST00000587147 CDC42BPBQ9Y5S2 1711 aa26.7■■□□□ 1.86
VAT1-204ENST00000587147 CDC42BPAQ5VT25 1732 aa26.69■■□□□ 1.86
VAT1-204ENST00000587147 ARHGAP5Q13017 1502 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms