RNA–Protein interactions for RNA: ENST00000587019.5

CCDC130-206, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-206ENST00000587019 PRG4Q92954 1404 aaPredicted RBP29.24■■■□□ 2.27
CCDC130-206ENST00000587019 JPH4Q96JJ6 628 aa29.17■■■□□ 2.26
CCDC130-206ENST00000587019 KIAA0586Q9BVV6 1533 aa29.15■■■□□ 2.26
CCDC130-206ENST00000587019 CARMIL1Q5VZK9 1371 aa29.09■■■□□ 2.25
CCDC130-206ENST00000587019 IQGAP2Q13576 1575 aa28.95■■■□□ 2.22
CCDC130-206ENST00000587019 ADCY10Q96PN6 1610 aa28.92■■■□□ 2.22
CCDC130-206ENST00000587019 RAPGEF2Q9Y4G8 1499 aa28.89■■■□□ 2.22
CCDC130-206ENST00000587019 KIF13AQ9H1H9 1805 aa28.87■■■□□ 2.21
CCDC130-206ENST00000587019 MAPKBP1O60336 1514 aa28.86■■■□□ 2.21
CCDC130-206ENST00000587019 CARMIL2Q6F5E8 1435 aa28.86■■■□□ 2.21
CCDC130-206ENST00000587019 NPM1P06748 294 aaKnown RBP eCLIP28.81■■■□□ 2.2
CCDC130-206ENST00000587019 PTPRGP23470 1445 aa28.8■■■□□ 2.2
CCDC130-206ENST00000587019 TNIKQ9UKE5 1360 aa28.78■■■□□ 2.2
CCDC130-206ENST00000587019 ABCC10Q5T3U5 1492 aa28.77■■■□□ 2.2
CCDC130-206ENST00000587019 UGGT2Q9NYU1 1516 aa28.75■■■□□ 2.19
CCDC130-206ENST00000587019 DIP2BQ9P265 1576 aa28.75■■■□□ 2.19
CCDC130-206ENST00000587019 DISP1Q96F81 1524 aa28.74■■■□□ 2.19
CCDC130-206ENST00000587019 CTTNBP2Q8WZ74 1663 aa28.72■■■□□ 2.19
CCDC130-206ENST00000587019 KIAA0556O60303 1618 aa28.69■■■□□ 2.18
CCDC130-206ENST00000587019 TTBK1Q5TCY1 1321 aaPredicted RBP28.69■■■□□ 2.18
CCDC130-206ENST00000587019 ABCC2Q92887 1545 aa28.68■■■□□ 2.18
CCDC130-206ENST00000587019 PRXQ9BXM0 1461 aa28.66■■■□□ 2.18
CCDC130-206ENST00000587019 FAM69CQ0P6D2 419 aa28.65■■■□□ 2.18
CCDC130-206ENST00000587019 UHRF1BP1LA0JNW5 1464 aa28.65■■■□□ 2.18
CCDC130-206ENST00000587019 UACAQ9BZF9 1416 aa28.6■■■□□ 2.17
CCDC130-206ENST00000587019 GOLGA3Q08378 1498 aa28.53■■■□□ 2.16
CCDC130-206ENST00000587019 PLB1Q6P1J6 1458 aa28.53■■■□□ 2.16
CCDC130-206ENST00000587019 ASXL2Q76L83 1435 aa28.52■■■□□ 2.16
CCDC130-206ENST00000587019 KDM5BQ9UGL1 1544 aa28.51■■■□□ 2.15
CCDC130-206ENST00000587019 TSPOAP1O95153 1857 aa28.48■■■□□ 2.15
CCDC130-206ENST00000587019 ZCCHC11Q5TAX3 1644 aaKnown RBP28.47■■■□□ 2.15
CCDC130-206ENST00000587019 GLI2P10070 1586 aa28.45■■■□□ 2.15
CCDC130-206ENST00000587019 EEA1Q15075 1411 aa28.43■■■□□ 2.14
CCDC130-206ENST00000587019 KDM6BO15054 1643 aa28.43■■■□□ 2.14
CCDC130-206ENST00000587019 CSRNP3Q8WYN3 585 aa28.4■■■□□ 2.14
CCDC130-206ENST00000587019 ABCA8O94911 1581 aa28.38■■■□□ 2.13
CCDC130-206ENST00000587019 EPRSP07814 1512 aaKnown RBP28.36■■■□□ 2.13
CCDC130-206ENST00000587019 PPRC1Q5VV67 1664 aaKnown RBP28.35■■■□□ 2.13
CCDC130-206ENST00000587019 AEBP2Q6ZN18 517 aaPredicted RBP28.32■■■□□ 2.12
CCDC130-206ENST00000587019 WDR7Q9Y4E6 1490 aa28.32■■■□□ 2.12
CCDC130-206ENST00000587019 MAP3K4Q9Y6R4 1608 aa28.32■■■□□ 2.12
CCDC130-206ENST00000587019 SAMD9Q5K651 1589 aa28.3■■■□□ 2.12
CCDC130-206ENST00000587019 TEX14Q8IWB6 1497 aa28.22■■■□□ 2.11
CCDC130-206ENST00000587019 KIF21BO75037 1637 aa28.22■■■□□ 2.11
CCDC130-206ENST00000587019 P3H3Q8IVL6 736 aa28.18■■■□□ 2.1
CCDC130-206ENST00000587019 FAM9AQ8IZU1 332 aaPredicted RBP28.18■■■□□ 2.1
CCDC130-206ENST00000587019 CFAP43Q8NDM7 1665 aa28.16■■■□□ 2.1
CCDC130-206ENST00000587019 RAPGEF6Q8TEU7 1601 aa28.14■■■□□ 2.1
CCDC130-206ENST00000587019 ATP10BO94823 1461 aa28.09■■■□□ 2.09
CCDC130-206ENST00000587019 EFCAB5A4FU69 1503 aa28.08■■■□□ 2.09
CCDC130-206ENST00000587019 COL17A1Q9UMD9 1497 aaPredicted RBP28.08■■■□□ 2.09
CCDC130-206ENST00000587019 MAGI3Q5TCQ9 1506 aa28.08■■■□□ 2.08
CCDC130-206ENST00000587019 FHOD3Q2V2M9 1422 aa28.07■■■□□ 2.08
CCDC130-206ENST00000587019 CD109Q6YHK3 1445 aa28.07■■■□□ 2.08
CCDC130-206ENST00000587019 CHIC1Q5VXU3 224 aa28.06■■■□□ 2.08
CCDC130-206ENST00000587019 ARID3CA6NKF2 412 aa28.05■■■□□ 2.08
CCDC130-206ENST00000587019 KCNH8Q96L42 1107 aa28.04■■■□□ 2.08
CCDC130-206ENST00000587019 RANGAP1P46060 587 aaPredicted RBP28.03■■■□□ 2.08
CCDC130-206ENST00000587019 NUP153P49790 1475 aaKnown RBP28.02■■■□□ 2.08
CCDC130-206ENST00000587019 ABCA9Q8IUA7 1624 aa27.98■■■□□ 2.07
CCDC130-206ENST00000587019 KDM4FA0A1W2PPD8 638 aa27.92■■■□□ 2.06
CCDC130-206ENST00000587019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.89■■■□□ 2.06
CCDC130-206ENST00000587019 HNRNPUL2Q1KMD3 747 aaKnown RBP27.89■■■□□ 2.06
CCDC130-206ENST00000587019 UBTFP17480 764 aaKnown RBP27.87■■■□□ 2.05
CCDC130-206ENST00000587019 ADGRL1O94910 1474 aa27.86■■■□□ 2.05
CCDC130-206ENST00000587019 EHMT2Q96KQ7 1210 aa27.85■■■□□ 2.05
CCDC130-206ENST00000587019 ARAP3Q8WWN8 1544 aa27.84■■■□□ 2.05
CCDC130-206ENST00000587019 ARHGAP35Q9NRY4 1499 aa27.8■■■□□ 2.04
CCDC130-206ENST00000587019 NEO1Q92859 1461 aa27.79■■■□□ 2.04
CCDC130-206ENST00000587019 PHLDB1Q86UU1 1377 aa27.79■■■□□ 2.04
CCDC130-206ENST00000587019 FMN1Q68DA7 1419 aa27.78■■■□□ 2.04
CCDC130-206ENST00000587019 HECW1Q76N89 1606 aa27.78■■■□□ 2.04
CCDC130-206ENST00000587019 CDK13Q14004 1512 aaKnown RBP27.77■■■□□ 2.04
CCDC130-206ENST00000587019 PLEKHD1A6NEE1 506 aa27.75■■■□□ 2.03
CCDC130-206ENST00000587019 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.72■■■□□ 2.03
CCDC130-206ENST00000587019 TTC37Q6PGP7 1564 aa27.71■■■□□ 2.03
CCDC130-206ENST00000587019 CFAP74Q9C0B2 1584 aa27.69■■■□□ 2.02
CCDC130-206ENST00000587019 FRMPD1Q5SYB0 1578 aa27.68■■■□□ 2.02
CCDC130-206ENST00000587019 FANCAO15360 1455 aa27.64■■■□□ 2.01
CCDC130-206ENST00000587019 RAPGEF3O95398 923 aa27.6■■■□□ 2.01
CCDC130-206ENST00000587019 ATP1B4Q9UN42 357 aaPredicted RBP27.6■■■□□ 2.01
CCDC130-206ENST00000587019 RICTORQ6R327 1708 aa27.58■■■□□ 2.01
CCDC130-206ENST00000587019 AKNAQ7Z591 1439 aa27.58■■■□□ 2
CCDC130-206ENST00000587019 DENND4BO75064 1496 aaPredicted RBP27.57■■■□□ 2
CCDC130-206ENST00000587019 PCF11O94913 1555 aaKnown RBP27.56■■■□□ 2
CCDC130-206ENST00000587019 KIF14Q15058 1648 aa27.56■■■□□ 2
CCDC130-206ENST00000587019 LRRIQ1Q96JM4 1722 aa27.55■■■□□ 2
CCDC130-206ENST00000587019 ARHGEF40Q8TER5 1519 aa27.55■■■□□ 2
CCDC130-206ENST00000587019 MYO5CQ9NQX4 1742 aa27.53■■■□□ 2
CCDC130-206ENST00000587019 CDK11AQ9UQ88 783 aaPredicted RBP27.53■■■□□ 2
CCDC130-206ENST00000587019 PLCH2O75038 1416 aa27.51■■□□□ 1.99
CCDC130-206ENST00000587019 TROQ12816 1431 aaPredicted RBP27.51■■□□□ 1.99
CCDC130-206ENST00000587019 ZMYM4Q5VZL5 1548 aa27.51■■□□□ 1.99
CCDC130-206ENST00000587019 CLIP1P30622 1438 aa27.5■■□□□ 1.99
CCDC130-206ENST00000587019 CASKIN1Q8WXD9 1431 aa27.5■■□□□ 1.99
CCDC130-206ENST00000587019 CCDC18Q5T9S5 1454 aa27.49■■□□□ 1.99
CCDC130-206ENST00000587019 ADAMTSL3P82987 1691 aa27.45■■□□□ 1.98
CCDC130-206ENST00000587019 FYCO1Q9BQS8 1478 aa27.44■■□□□ 1.98
CCDC130-206ENST00000587019 BCORL1Q5H9F3 1711 aa27.43■■□□□ 1.98
CCDC130-206ENST00000587019 POGZQ7Z3K3 1410 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms