RNA–Protein interactions for RNA: ENST00000586985.1

SMARCA4-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-212ENST00000586985 RAPGEF2Q9Y4G8 1499 aa24.23■■□□□ 1.47
SMARCA4-212ENST00000586985 KIAA0586Q9BVV6 1533 aa24.2■■□□□ 1.47
SMARCA4-212ENST00000586985 ARAP1Q96P48 1450 aa24.2■■□□□ 1.47
SMARCA4-212ENST00000586985 FAM9AQ8IZU1 332 aaPredicted RBP24.19■■□□□ 1.46
SMARCA4-212ENST00000586985 PRG4Q92954 1404 aaPredicted RBP24.18■■□□□ 1.46
SMARCA4-212ENST00000586985 EEA1Q15075 1411 aa24.16■■□□□ 1.46
SMARCA4-212ENST00000586985 SHROOM2Q13796 1616 aa24.11■■□□□ 1.45
SMARCA4-212ENST00000586985 PRXQ9BXM0 1461 aa24.11■■□□□ 1.45
SMARCA4-212ENST00000586985 ERCC6L2Q5T890 1561 aa24.09■■□□□ 1.45
SMARCA4-212ENST00000586985 CARMIL2Q6F5E8 1435 aa24.01■■□□□ 1.43
SMARCA4-212ENST00000586985 IQGAP2Q13576 1575 aa23.99■■□□□ 1.43
SMARCA4-212ENST00000586985 TTBK1Q5TCY1 1321 aaPredicted RBP23.97■■□□□ 1.43
SMARCA4-212ENST00000586985 PTPRGP23470 1445 aa23.93■■□□□ 1.42
SMARCA4-212ENST00000586985 TNIKQ9UKE5 1360 aa23.91■■□□□ 1.42
SMARCA4-212ENST00000586985 TRHP20396 242 aaPredicted RBP23.91■■□□□ 1.42
SMARCA4-212ENST00000586985 NPM1P06748 294 aaKnown RBP eCLIP23.9■■□□□ 1.42
SMARCA4-212ENST00000586985 UGGT2Q9NYU1 1516 aa23.89■■□□□ 1.41
SMARCA4-212ENST00000586985 EHMT2Q96KQ7 1210 aa23.88■■□□□ 1.41
SMARCA4-212ENST00000586985 UBTFP17480 764 aaKnown RBP23.86■■□□□ 1.41
SMARCA4-212ENST00000586985 DISP1Q96F81 1524 aa23.84■■□□□ 1.41
SMARCA4-212ENST00000586985 GOLGA3Q08378 1498 aa23.82■■□□□ 1.4
SMARCA4-212ENST00000586985 CTTNBP2Q8WZ74 1663 aa23.81■■□□□ 1.4
SMARCA4-212ENST00000586985 RANGAP1P46060 587 aaPredicted RBP23.81■■□□□ 1.4
SMARCA4-212ENST00000586985 P3H3Q8IVL6 736 aa23.79■■□□□ 1.4
SMARCA4-212ENST00000586985 KIF21BO75037 1637 aa23.79■■□□□ 1.4
SMARCA4-212ENST00000586985 KIAA0556O60303 1618 aa23.74■■□□□ 1.39
SMARCA4-212ENST00000586985 UACAQ9BZF9 1416 aa23.72■■□□□ 1.39
SMARCA4-212ENST00000586985 ADCY10Q96PN6 1610 aa23.66■■□□□ 1.38
SMARCA4-212ENST00000586985 UHRF1BP1LA0JNW5 1464 aa23.65■■□□□ 1.38
SMARCA4-212ENST00000586985 ABCC2Q92887 1545 aa23.62■■□□□ 1.37
SMARCA4-212ENST00000586985 FAM69CQ0P6D2 419 aa23.59■■□□□ 1.37
SMARCA4-212ENST00000586985 PLB1Q6P1J6 1458 aa23.59■■□□□ 1.37
SMARCA4-212ENST00000586985 SAMD9Q5K651 1589 aa23.57■■□□□ 1.36
SMARCA4-212ENST00000586985 MAPKBP1O60336 1514 aa23.55■■□□□ 1.36
SMARCA4-212ENST00000586985 FHOD3Q2V2M9 1422 aa23.54■■□□□ 1.36
SMARCA4-212ENST00000586985 KDM5BQ9UGL1 1544 aa23.53■■□□□ 1.36
SMARCA4-212ENST00000586985 EFCAB5A4FU69 1503 aa23.52■■□□□ 1.36
SMARCA4-212ENST00000586985 ABCA8O94911 1581 aa23.51■■□□□ 1.35
SMARCA4-212ENST00000586985 ASXL2Q76L83 1435 aa23.5■■□□□ 1.35
SMARCA4-212ENST00000586985 ABCC10Q5T3U5 1492 aa23.5■■□□□ 1.35
SMARCA4-212ENST00000586985 ARID3CA6NKF2 412 aa23.5■■□□□ 1.35
SMARCA4-212ENST00000586985 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.48■■□□□ 1.35
SMARCA4-212ENST00000586985 HNRNPUL2Q1KMD3 747 aaKnown RBP23.48■■□□□ 1.35
SMARCA4-212ENST00000586985 ATP1B4Q9UN42 357 aaPredicted RBP23.43■■□□□ 1.34
SMARCA4-212ENST00000586985 ARHGAP35Q9NRY4 1499 aa23.43■■□□□ 1.34
SMARCA4-212ENST00000586985 KCNH8Q96L42 1107 aa23.42■■□□□ 1.34
SMARCA4-212ENST00000586985 ZCCHC11Q5TAX3 1644 aaKnown RBP23.41■■□□□ 1.34
SMARCA4-212ENST00000586985 ATP10BO94823 1461 aa23.4■■□□□ 1.34
SMARCA4-212ENST00000586985 LOC105371045A0A1W2PR82 267 aa23.39■■□□□ 1.33
SMARCA4-212ENST00000586985 FMN1Q68DA7 1419 aa23.39■■□□□ 1.33
SMARCA4-212ENST00000586985 RAPGEF6Q8TEU7 1601 aa23.37■■□□□ 1.33
SMARCA4-212ENST00000586985 DIP2BQ9P265 1576 aa23.37■■□□□ 1.33
SMARCA4-212ENST00000586985 CLIP1P30622 1438 aa23.35■■□□□ 1.33
SMARCA4-212ENST00000586985 WDR7Q9Y4E6 1490 aa23.35■■□□□ 1.33
SMARCA4-212ENST00000586985 PLEKHD1A6NEE1 506 aa23.34■■□□□ 1.33
SMARCA4-212ENST00000586985 EPRSP07814 1512 aaKnown RBP23.33■■□□□ 1.33
SMARCA4-212ENST00000586985 NUP153P49790 1475 aaKnown RBP23.33■■□□□ 1.33
SMARCA4-212ENST00000586985 KIF13AQ9H1H9 1805 aa23.33■■□□□ 1.32
SMARCA4-212ENST00000586985 GLI2P10070 1586 aa23.29■■□□□ 1.32
SMARCA4-212ENST00000586985 CDK11AQ9UQ88 783 aaPredicted RBP23.25■■□□□ 1.31
SMARCA4-212ENST00000586985 CEP162Q5TB80 1403 aa23.21■■□□□ 1.31
SMARCA4-212ENST00000586985 CD109Q6YHK3 1445 aa23.21■■□□□ 1.31
SMARCA4-212ENST00000586985 CASKIN1Q8WXD9 1431 aa23.18■■□□□ 1.3
SMARCA4-212ENST00000586985 HECW1Q76N89 1606 aa23.17■■□□□ 1.3
SMARCA4-212ENST00000586985 CDK13Q14004 1512 aaKnown RBP23.15■■□□□ 1.3
SMARCA4-212ENST00000586985 TEX14Q8IWB6 1497 aa23.15■■□□□ 1.3
SMARCA4-212ENST00000586985 TSPOAP1O95153 1857 aa23.15■■□□□ 1.3
SMARCA4-212ENST00000586985 MAP3K4Q9Y6R4 1608 aa23.13■■□□□ 1.29
SMARCA4-212ENST00000586985 MAGI3Q5TCQ9 1506 aa23.09■■□□□ 1.29
SMARCA4-212ENST00000586985 CFAP43Q8NDM7 1665 aa23.07■■□□□ 1.28
SMARCA4-212ENST00000586985 CCDC18Q5T9S5 1454 aa23.07■■□□□ 1.28
SMARCA4-212ENST00000586985 FYCO1Q9BQS8 1478 aa23.07■■□□□ 1.28
SMARCA4-212ENST00000586985 PCF11O94913 1555 aaKnown RBP23.06■■□□□ 1.28
SMARCA4-212ENST00000586985 KDM6BO15054 1643 aa23.04■■□□□ 1.28
SMARCA4-212ENST00000586985 ABCA9Q8IUA7 1624 aa23.04■■□□□ 1.28
SMARCA4-212ENST00000586985 PPRC1Q5VV67 1664 aaKnown RBP23.03■■□□□ 1.28
SMARCA4-212ENST00000586985 TROQ12816 1431 aaPredicted RBP23.03■■□□□ 1.28
SMARCA4-212ENST00000586985 PHLDB1Q86UU1 1377 aa23.01■■□□□ 1.27
SMARCA4-212ENST00000586985 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.98■■□□□ 1.27
SMARCA4-212ENST00000586985 COL17A1Q9UMD9 1497 aaPredicted RBP22.98■■□□□ 1.27
SMARCA4-212ENST00000586985 NEO1Q92859 1461 aa22.94■■□□□ 1.26
SMARCA4-212ENST00000586985 EFCAB2Q5VUJ9 269 aa22.94■■□□□ 1.26
SMARCA4-212ENST00000586985 PLCH2O75038 1416 aa22.93■■□□□ 1.26
SMARCA4-212ENST00000586985 VPS8Q8N3P4 1428 aa22.93■■□□□ 1.26
SMARCA4-212ENST00000586985 MTUS2Q5JR59 1369 aa22.92■■□□□ 1.26
SMARCA4-212ENST00000586985 LRRIQ1Q96JM4 1722 aa22.92■■□□□ 1.26
SMARCA4-212ENST00000586985 ARAP3Q8WWN8 1544 aa22.9■■□□□ 1.26
SMARCA4-212ENST00000586985 FANCAO15360 1455 aa22.9■■□□□ 1.26
SMARCA4-212ENST00000586985 KIF14Q15058 1648 aa22.9■■□□□ 1.26
SMARCA4-212ENST00000586985 RAPGEF3O95398 923 aa22.89■■□□□ 1.25
SMARCA4-212ENST00000586985 AKNAQ7Z591 1439 aa22.89■■□□□ 1.25
SMARCA4-212ENST00000586985 TTC37Q6PGP7 1564 aa22.89■■□□□ 1.25
SMARCA4-212ENST00000586985 APLP2Q06481 763 aa22.88■■□□□ 1.25
SMARCA4-212ENST00000586985 DENND4BO75064 1496 aaPredicted RBP22.82■■□□□ 1.24
SMARCA4-212ENST00000586985 ARHGAP5Q13017 1502 aa22.8■■□□□ 1.24
SMARCA4-212ENST00000586985 SCAPERQ9BY12 1400 aa22.8■■□□□ 1.24
SMARCA4-212ENST00000586985 CCNB3Q8WWL7 1395 aa22.79■■□□□ 1.24
SMARCA4-212ENST00000586985 ZNF777Q9ULD5 760 aaPredicted RBP22.79■■□□□ 1.24
SMARCA4-212ENST00000586985 CFAP74Q9C0B2 1584 aa22.79■■□□□ 1.24
SMARCA4-212ENST00000586985 ADGRL1O94910 1474 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms