RNA–Protein interactions for RNA: ENST00000586967.1

CALR-204, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 394 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-204ENST00000586967 LOC105371045A0A1W2PR82 267 aa23.78■■□□□ 1.4
CALR-204ENST00000586967 KIAA0586Q9BVV6 1533 aa23.74■■□□□ 1.39
CALR-204ENST00000586967 CEP170Q5SW79 1584 aa23.73■■□□□ 1.39
CALR-204ENST00000586967 IQGAP2Q13576 1575 aa23.71■■□□□ 1.39
CALR-204ENST00000586967 OSCARQ8IYS5 282 aa23.69■■□□□ 1.38
CALR-204ENST00000586967 CLASP1Q7Z460 1538 aa23.61■■□□□ 1.37
CALR-204ENST00000586967 UGGT2Q9NYU1 1516 aa23.59■■□□□ 1.37
CALR-204ENST00000586967 CEP162Q5TB80 1403 aa23.59■■□□□ 1.37
CALR-204ENST00000586967 EFCAB5A4FU69 1503 aa23.58■■□□□ 1.36
CALR-204ENST00000586967 CLIP1P30622 1438 aa23.56■■□□□ 1.36
CALR-204ENST00000586967 JPH4Q96JJ6 628 aa23.55■■□□□ 1.36
CALR-204ENST00000586967 CARMIL2Q6F5E8 1435 aa23.53■■□□□ 1.36
CALR-204ENST00000586967 SHROOM2Q13796 1616 aa23.53■■□□□ 1.36
CALR-204ENST00000586967 RANGAP1P46060 587 aaPredicted RBP23.5■■□□□ 1.35
CALR-204ENST00000586967 SAMD9Q5K651 1589 aa23.49■■□□□ 1.35
CALR-204ENST00000586967 KIAA0556O60303 1618 aa23.44■■□□□ 1.34
CALR-204ENST00000586967 ARHGAP35Q9NRY4 1499 aa23.44■■□□□ 1.34
CALR-204ENST00000586967 PRG4Q92954 1404 aaPredicted RBP23.44■■□□□ 1.34
CALR-204ENST00000586967 DISP1Q96F81 1524 aa23.42■■□□□ 1.34
CALR-204ENST00000586967 FMN1Q68DA7 1419 aa23.36■■□□□ 1.33
CALR-204ENST00000586967 P3H3Q8IVL6 736 aa23.34■■□□□ 1.33
CALR-204ENST00000586967 ARAP1Q96P48 1450 aa23.34■■□□□ 1.33
CALR-204ENST00000586967 FHOD3Q2V2M9 1422 aa23.33■■□□□ 1.33
CALR-204ENST00000586967 VPS8Q8N3P4 1428 aa23.29■■□□□ 1.32
CALR-204ENST00000586967 PTPRGP23470 1445 aa23.27■■□□□ 1.32
CALR-204ENST00000586967 ARHGEF11O15085 1522 aa23.25■■□□□ 1.31
CALR-204ENST00000586967 ERCC6L2Q5T890 1561 aa23.25■■□□□ 1.31
CALR-204ENST00000586967 FYCO1Q9BQS8 1478 aa23.2■■□□□ 1.3
CALR-204ENST00000586967 CASKIN1Q8WXD9 1431 aa23.19■■□□□ 1.3
CALR-204ENST00000586967 RIMBP3CA6NJZ7 1639 aa23.18■■□□□ 1.3
CALR-204ENST00000586967 RIMBP3BA6NNM3 1639 aa23.18■■□□□ 1.3
CALR-204ENST00000586967 RIMBP3Q9UFD9 1639 aa23.18■■□□□ 1.3
CALR-204ENST00000586967 TTBK1Q5TCY1 1321 aaPredicted RBP23.17■■□□□ 1.3
CALR-204ENST00000586967 HECW1Q76N89 1606 aa23.17■■□□□ 1.3
CALR-204ENST00000586967 RAPGEF6Q8TEU7 1601 aa23.17■■□□□ 1.3
CALR-204ENST00000586967 PCF11O94913 1555 aaKnown RBP23.15■■□□□ 1.3
CALR-204ENST00000586967 APLP2Q06481 763 aa23.14■■□□□ 1.29
CALR-204ENST00000586967 UACAQ9BZF9 1416 aa23.14■■□□□ 1.29
CALR-204ENST00000586967 ABCA8O94911 1581 aa23.13■■□□□ 1.29
CALR-204ENST00000586967 PLB1Q6P1J6 1458 aa23.11■■□□□ 1.29
CALR-204ENST00000586967 UHRF1BP1LA0JNW5 1464 aa23.1■■□□□ 1.29
CALR-204ENST00000586967 CCDC18Q5T9S5 1454 aa23.1■■□□□ 1.29
CALR-204ENST00000586967 ABCC2Q92887 1545 aa23.09■■□□□ 1.29
CALR-204ENST00000586967 ATP1B4Q9UN42 357 aaPredicted RBP23.09■■□□□ 1.29
CALR-204ENST00000586967 MAP3K1Q13233 1512 aa23.06■■□□□ 1.28
CALR-204ENST00000586967 DNAJC5Q9H3Z4 198 aa23.03■■□□□ 1.28
CALR-204ENST00000586967 NUP153P49790 1475 aaKnown RBP23.03■■□□□ 1.28
CALR-204ENST00000586967 EPRSP07814 1512 aaKnown RBP23.02■■□□□ 1.28
CALR-204ENST00000586967 CDK11AQ9UQ88 783 aaPredicted RBP23■■□□□ 1.27
CALR-204ENST00000586967 ADCY10Q96PN6 1610 aa22.99■■□□□ 1.27
CALR-204ENST00000586967 CFAP43Q8NDM7 1665 aa22.99■■□□□ 1.27
CALR-204ENST00000586967 TIAM1Q13009 1591 aa22.98■■□□□ 1.27
CALR-204ENST00000586967 CYB5RLQ6IPT4 315 aa22.98■■□□□ 1.27
CALR-204ENST00000586967 NPM1P06748 294 aaKnown RBP eCLIP22.97■■□□□ 1.27
CALR-204ENST00000586967 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.96■■□□□ 1.27
CALR-204ENST00000586967 HNRNPUL2Q1KMD3 747 aaKnown RBP22.96■■□□□ 1.27
CALR-204ENST00000586967 KDM5BQ9UGL1 1544 aa22.96■■□□□ 1.27
CALR-204ENST00000586967 LRRIQ1Q96JM4 1722 aa22.94■■□□□ 1.26
CALR-204ENST00000586967 ATP10BO94823 1461 aa22.93■■□□□ 1.26
CALR-204ENST00000586967 CDK13Q14004 1512 aaKnown RBP22.92■■□□□ 1.26
CALR-204ENST00000586967 ZCCHC11Q5TAX3 1644 aaKnown RBP22.91■■□□□ 1.26
CALR-204ENST00000586967 MTUS2Q5JR59 1369 aa22.89■■□□□ 1.25
CALR-204ENST00000586967 PLEKHD1A6NEE1 506 aa22.88■■□□□ 1.25
CALR-204ENST00000586967 ARID3CA6NKF2 412 aa22.87■■□□□ 1.25
CALR-204ENST00000586967 EHBP1L1Q8N3D4 1523 aa22.87■■□□□ 1.25
CALR-204ENST00000586967 LRRC9Q6ZRR7 1453 aa22.86■■□□□ 1.25
CALR-204ENST00000586967 TROQ12816 1431 aaPredicted RBP22.82■■□□□ 1.24
CALR-204ENST00000586967 SUPT6HQ7KZ85 1726 aaKnown RBP22.79■■□□□ 1.24
CALR-204ENST00000586967 MAPKBP1O60336 1514 aa22.78■■□□□ 1.24
CALR-204ENST00000586967 KANK4Q5T7N3 995 aaPredicted RBP22.77■■□□□ 1.24
CALR-204ENST00000586967 WDR7Q9Y4E6 1490 aa22.77■■□□□ 1.24
CALR-204ENST00000586967 KIF14Q15058 1648 aa22.76■■□□□ 1.23
CALR-204ENST00000586967 ASXL2Q76L83 1435 aa22.75■■□□□ 1.23
CALR-204ENST00000586967 MAGI3Q5TCQ9 1506 aa22.75■■□□□ 1.23
CALR-204ENST00000586967 NCOA2Q15596 1464 aa22.67■■□□□ 1.22
CALR-204ENST00000586967 PPARGC1BQ86YN6 1023 aaKnown RBP22.67■■□□□ 1.22
CALR-204ENST00000586967 KCNH8Q96L42 1107 aa22.65■■□□□ 1.22
CALR-204ENST00000586967 CCNB3Q8WWL7 1395 aa22.63■■□□□ 1.21
CALR-204ENST00000586967 ITSN2Q9NZM3 1697 aa22.63■■□□□ 1.21
CALR-204ENST00000586967 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.6■■□□□ 1.21
CALR-204ENST00000586967 ABCA9Q8IUA7 1624 aa22.6■■□□□ 1.21
CALR-204ENST00000586967 ABCC10Q5T3U5 1492 aa22.6■■□□□ 1.21
CALR-204ENST00000586967 MYOM3Q5VTT5 1437 aa22.58■■□□□ 1.21
CALR-204ENST00000586967 GLI2P10070 1586 aa22.58■■□□□ 1.2
CALR-204ENST00000586967 MYO5CQ9NQX4 1742 aa22.57■■□□□ 1.2
CALR-204ENST00000586967 MIA2Q96PC5 1412 aa22.56■■□□□ 1.2
CALR-204ENST00000586967 TTC37Q6PGP7 1564 aa22.55■■□□□ 1.2
CALR-204ENST00000586967 PHLDB1Q86UU1 1377 aa22.55■■□□□ 1.2
CALR-204ENST00000586967 DIP2BQ9P265 1576 aa22.55■■□□□ 1.2
CALR-204ENST00000586967 ARAP3Q8WWN8 1544 aa22.54■■□□□ 1.2
CALR-204ENST00000586967 CDC42BPAQ5VT25 1732 aa22.53■■□□□ 1.2
CALR-204ENST00000586967 PREX2Q70Z35 1606 aa22.53■■□□□ 1.2
CALR-204ENST00000586967 GPATCH8Q9UKJ3 1502 aaKnown RBP22.52■■□□□ 1.2
CALR-204ENST00000586967 CFDP1Q9UEE9 299 aaPredicted RBP22.51■■□□□ 1.19
CALR-204ENST00000586967 PLCH2O75038 1416 aa22.5■■□□□ 1.19
CALR-204ENST00000586967 FGD6Q6ZV73 1430 aa22.5■■□□□ 1.19
CALR-204ENST00000586967 FAM69CQ0P6D2 419 aa22.49■■□□□ 1.19
CALR-204ENST00000586967 CD109Q6YHK3 1445 aa22.48■■□□□ 1.19
CALR-204ENST00000586967 RRBP1Q9P2E9 1410 aaKnown RBP22.48■■□□□ 1.19
CALR-204ENST00000586967 ARHGAP5Q13017 1502 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms