RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 IGF1RP08069 1367 aa24.55■■□□□ 1.52
ATG4D-206ENST00000586863 CUL7Q14999 1698 aa24.54■■□□□ 1.52
ATG4D-206ENST00000586863 KIAA0586Q9BVV6 1533 aa24.46■■□□□ 1.51
ATG4D-206ENST00000586863 KIF13AQ9H1H9 1805 aa24.45■■□□□ 1.5
ATG4D-206ENST00000586863 CARMIL1Q5VZK9 1371 aa24.39■■□□□ 1.49
ATG4D-206ENST00000586863 ADCY10Q96PN6 1610 aa24.39■■□□□ 1.49
ATG4D-206ENST00000586863 MAPKBP1O60336 1514 aa24.32■■□□□ 1.48
ATG4D-206ENST00000586863 ABCC10Q5T3U5 1492 aa24.29■■□□□ 1.48
ATG4D-206ENST00000586863 NPM1P06748 294 aaKnown RBP eCLIP24.27■■□□□ 1.48
ATG4D-206ENST00000586863 IQGAP2Q13576 1575 aa24.27■■□□□ 1.48
ATG4D-206ENST00000586863 DIP2BQ9P265 1576 aa24.27■■□□□ 1.48
ATG4D-206ENST00000586863 FAM69CQ0P6D2 419 aa24.23■■□□□ 1.47
ATG4D-206ENST00000586863 PTPRGP23470 1445 aa24.22■■□□□ 1.47
ATG4D-206ENST00000586863 CARMIL2Q6F5E8 1435 aa24.19■■□□□ 1.46
ATG4D-206ENST00000586863 TNIKQ9UKE5 1360 aa24.18■■□□□ 1.46
ATG4D-206ENST00000586863 TTBK1Q5TCY1 1321 aaPredicted RBP24.18■■□□□ 1.46
ATG4D-206ENST00000586863 RAPGEF2Q9Y4G8 1499 aa24.18■■□□□ 1.46
ATG4D-206ENST00000586863 DISP1Q96F81 1524 aa24.15■■□□□ 1.46
ATG4D-206ENST00000586863 AEBP2Q6ZN18 517 aaPredicted RBP24.14■■□□□ 1.45
ATG4D-206ENST00000586863 ABCC2Q92887 1545 aa24.12■■□□□ 1.45
ATG4D-206ENST00000586863 TSPOAP1O95153 1857 aa24.12■■□□□ 1.45
ATG4D-206ENST00000586863 UGGT2Q9NYU1 1516 aa24.11■■□□□ 1.45
ATG4D-206ENST00000586863 UHRF1BP1LA0JNW5 1464 aa24.07■■□□□ 1.44
ATG4D-206ENST00000586863 KIAA0556O60303 1618 aa24.06■■□□□ 1.44
ATG4D-206ENST00000586863 UACAQ9BZF9 1416 aa24.05■■□□□ 1.44
ATG4D-206ENST00000586863 CTTNBP2Q8WZ74 1663 aa24.04■■□□□ 1.44
ATG4D-206ENST00000586863 KDM6BO15054 1643 aa24.03■■□□□ 1.44
ATG4D-206ENST00000586863 ASXL2Q76L83 1435 aa24.03■■□□□ 1.44
ATG4D-206ENST00000586863 PLB1Q6P1J6 1458 aa24■■□□□ 1.43
ATG4D-206ENST00000586863 GLI2P10070 1586 aa23.97■■□□□ 1.43
ATG4D-206ENST00000586863 KDM5BQ9UGL1 1544 aa23.97■■□□□ 1.43
ATG4D-206ENST00000586863 PPRC1Q5VV67 1664 aaKnown RBP23.96■■□□□ 1.43
ATG4D-206ENST00000586863 PRXQ9BXM0 1461 aa23.96■■□□□ 1.43
ATG4D-206ENST00000586863 ZCCHC11Q5TAX3 1644 aaKnown RBP23.95■■□□□ 1.43
ATG4D-206ENST00000586863 EPRSP07814 1512 aaKnown RBP23.9■■□□□ 1.42
ATG4D-206ENST00000586863 GOLGA3Q08378 1498 aa23.87■■□□□ 1.41
ATG4D-206ENST00000586863 MAP3K4Q9Y6R4 1608 aa23.87■■□□□ 1.41
ATG4D-206ENST00000586863 ABCA8O94911 1581 aa23.84■■□□□ 1.41
ATG4D-206ENST00000586863 WDR7Q9Y4E6 1490 aa23.81■■□□□ 1.4
ATG4D-206ENST00000586863 COL17A1Q9UMD9 1497 aaPredicted RBP23.76■■□□□ 1.39
ATG4D-206ENST00000586863 KDM4FA0A1W2PPD8 638 aa23.75■■□□□ 1.39
ATG4D-206ENST00000586863 TEX14Q8IWB6 1497 aa23.75■■□□□ 1.39
ATG4D-206ENST00000586863 CSRNP3Q8WYN3 585 aa23.72■■□□□ 1.39
ATG4D-206ENST00000586863 SAMD9Q5K651 1589 aa23.69■■□□□ 1.38
ATG4D-206ENST00000586863 CFAP43Q8NDM7 1665 aa23.69■■□□□ 1.38
ATG4D-206ENST00000586863 P3H3Q8IVL6 736 aa23.67■■□□□ 1.38
ATG4D-206ENST00000586863 KCNH8Q96L42 1107 aa23.64■■□□□ 1.37
ATG4D-206ENST00000586863 EEA1Q15075 1411 aa23.64■■□□□ 1.37
ATG4D-206ENST00000586863 CD109Q6YHK3 1445 aa23.64■■□□□ 1.37
ATG4D-206ENST00000586863 MAGI3Q5TCQ9 1506 aa23.64■■□□□ 1.37
ATG4D-206ENST00000586863 ARID3CA6NKF2 412 aa23.62■■□□□ 1.37
ATG4D-206ENST00000586863 ATP10BO94823 1461 aa23.61■■□□□ 1.37
ATG4D-206ENST00000586863 ADGRL1O94910 1474 aa23.6■■□□□ 1.37
ATG4D-206ENST00000586863 RAPGEF6Q8TEU7 1601 aa23.58■■□□□ 1.36
ATG4D-206ENST00000586863 FAM9AQ8IZU1 332 aaPredicted RBP23.54■■□□□ 1.36
ATG4D-206ENST00000586863 FHOD3Q2V2M9 1422 aa23.52■■□□□ 1.36
ATG4D-206ENST00000586863 KIF21BO75037 1637 aa23.51■■□□□ 1.35
ATG4D-206ENST00000586863 ABCA9Q8IUA7 1624 aa23.51■■□□□ 1.35
ATG4D-206ENST00000586863 RANGAP1P46060 587 aaPredicted RBP23.5■■□□□ 1.35
ATG4D-206ENST00000586863 NUP153P49790 1475 aaKnown RBP23.49■■□□□ 1.35
ATG4D-206ENST00000586863 ARAP3Q8WWN8 1544 aa23.44■■□□□ 1.34
ATG4D-206ENST00000586863 EFCAB5A4FU69 1503 aa23.43■■□□□ 1.34
ATG4D-206ENST00000586863 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.41■■□□□ 1.34
ATG4D-206ENST00000586863 HNRNPUL2Q1KMD3 747 aaKnown RBP23.41■■□□□ 1.34
ATG4D-206ENST00000586863 NEO1Q92859 1461 aa23.36■■□□□ 1.33
ATG4D-206ENST00000586863 PHLDB1Q86UU1 1377 aa23.35■■□□□ 1.33
ATG4D-206ENST00000586863 CHIC1Q5VXU3 224 aa23.32■■□□□ 1.32
ATG4D-206ENST00000586863 FRMPD1Q5SYB0 1578 aa23.31■■□□□ 1.32
ATG4D-206ENST00000586863 EHMT2Q96KQ7 1210 aa23.31■■□□□ 1.32
ATG4D-206ENST00000586863 RAPGEF3O95398 923 aa23.29■■□□□ 1.32
ATG4D-206ENST00000586863 CDK13Q14004 1512 aaKnown RBP23.28■■□□□ 1.32
ATG4D-206ENST00000586863 HECW2Q9P2P5 1572 aa23.28■■□□□ 1.32
ATG4D-206ENST00000586863 PLEKHD1A6NEE1 506 aa23.28■■□□□ 1.32
ATG4D-206ENST00000586863 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.28■■□□□ 1.32
ATG4D-206ENST00000586863 TTC37Q6PGP7 1564 aa23.27■■□□□ 1.32
ATG4D-206ENST00000586863 UBTFP17480 764 aaKnown RBP23.26■■□□□ 1.31
ATG4D-206ENST00000586863 ARHGAP35Q9NRY4 1499 aa23.24■■□□□ 1.31
ATG4D-206ENST00000586863 RICTORQ6R327 1708 aa23.22■■□□□ 1.31
ATG4D-206ENST00000586863 CFAP74Q9C0B2 1584 aa23.22■■□□□ 1.31
ATG4D-206ENST00000586863 FANCAO15360 1455 aa23.21■■□□□ 1.31
ATG4D-206ENST00000586863 ADAMTSL3P82987 1691 aa23.2■■□□□ 1.3
ATG4D-206ENST00000586863 HECW1Q76N89 1606 aa23.2■■□□□ 1.3
ATG4D-206ENST00000586863 FMN1Q68DA7 1419 aa23.19■■□□□ 1.3
ATG4D-206ENST00000586863 AKNAQ7Z591 1439 aa23.19■■□□□ 1.3
ATG4D-206ENST00000586863 ARHGEF40Q8TER5 1519 aa23.18■■□□□ 1.3
ATG4D-206ENST00000586863 DENND4BO75064 1496 aaPredicted RBP23.18■■□□□ 1.3
ATG4D-206ENST00000586863 BCORL1Q5H9F3 1711 aa23.16■■□□□ 1.3
ATG4D-206ENST00000586863 PTPRMP28827 1452 aa23.12■■□□□ 1.29
ATG4D-206ENST00000586863 ATP1B4Q9UN42 357 aaPredicted RBP23.12■■□□□ 1.29
ATG4D-206ENST00000586863 ZMYM4Q5VZL5 1548 aa23.12■■□□□ 1.29
ATG4D-206ENST00000586863 MADDQ8WXG6 1647 aa23.11■■□□□ 1.29
ATG4D-206ENST00000586863 LRRIQ1Q96JM4 1722 aa23.11■■□□□ 1.29
ATG4D-206ENST00000586863 KIF14Q15058 1648 aa23.1■■□□□ 1.29
ATG4D-206ENST00000586863 PLCH2O75038 1416 aa23.09■■□□□ 1.29
ATG4D-206ENST00000586863 MYO5CQ9NQX4 1742 aa23.09■■□□□ 1.29
ATG4D-206ENST00000586863 ARID4BQ4LE39 1312 aaPredicted RBP23.08■■□□□ 1.29
ATG4D-206ENST00000586863 SIGLEC1Q9BZZ2 1709 aa23.07■■□□□ 1.28
ATG4D-206ENST00000586863 ZFYVE16Q7Z3T8 1539 aa23.06■■□□□ 1.28
ATG4D-206ENST00000586863 YEATS2Q9ULM3 1422 aa23.06■■□□□ 1.28
ATG4D-206ENST00000586863 POGZQ7Z3K3 1410 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms