RNA–Protein interactions for RNA: ENST00000586856.1

ERCC2-209, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-209ENST00000586856 KIAA0586Q9BVV6 1533 aa40.77■■■■■ 4.12
ERCC2-209ENST00000586856 PRG4Q92954 1404 aaPredicted RBP40.71■■■■■ 4.11
ERCC2-209ENST00000586856 RAPGEF2Q9Y4G8 1499 aa40.7■■■■■ 4.11
ERCC2-209ENST00000586856 JPH4Q96JJ6 628 aa40.69■■■■■ 4.1
ERCC2-209ENST00000586856 IQGAP2Q13576 1575 aa40.57■■■■■ 4.09
ERCC2-209ENST00000586856 PRXQ9BXM0 1461 aa40.53■■■■■ 4.08
ERCC2-209ENST00000586856 CHIC1Q5VXU3 224 aa40.46■■■■■ 4.07
ERCC2-209ENST00000586856 EEA1Q15075 1411 aa40.45■■■■■ 4.07
ERCC2-209ENST00000586856 CTTNBP2Q8WZ74 1663 aa40.44■■■■■ 4.06
ERCC2-209ENST00000586856 CSRNP3Q8WYN3 585 aa40.36■■■■■ 4.05
ERCC2-209ENST00000586856 UGGT2Q9NYU1 1516 aa40.32■■■■■ 4.05
ERCC2-209ENST00000586856 CARMIL2Q6F5E8 1435 aa40.32■■■■■ 4.04
ERCC2-209ENST00000586856 DISP1Q96F81 1524 aa40.27■■■■■ 4.04
ERCC2-209ENST00000586856 KIAA0556O60303 1618 aa40.21■■■■■ 4.03
ERCC2-209ENST00000586856 FAM9AQ8IZU1 332 aaPredicted RBP40.21■■■■■ 4.03
ERCC2-209ENST00000586856 TNIKQ9UKE5 1360 aa40.2■■■■■ 4.03
ERCC2-209ENST00000586856 ADCY10Q96PN6 1610 aa40.2■■■■■ 4.03
ERCC2-209ENST00000586856 PTPRGP23470 1445 aa40.17■■■■■ 4.02
ERCC2-209ENST00000586856 TRHP20396 242 aaPredicted RBP40.17■■■■■ 4.02
ERCC2-209ENST00000586856 KIF21BO75037 1637 aa40.13■■■■■ 4.01
ERCC2-209ENST00000586856 TTBK1Q5TCY1 1321 aaPredicted RBP40.08■■■■■ 4.01
ERCC2-209ENST00000586856 GOLGA3Q08378 1498 aa40.07■■■■■ 4
ERCC2-209ENST00000586856 MAPKBP1O60336 1514 aa39.96■■■■□ 3.99
ERCC2-209ENST00000586856 UACAQ9BZF9 1416 aa39.93■■■■□ 3.98
ERCC2-209ENST00000586856 NPM1P06748 294 aaKnown RBP eCLIP39.93■■■■□ 3.98
ERCC2-209ENST00000586856 UHRF1BP1LA0JNW5 1464 aa39.93■■■■□ 3.98
ERCC2-209ENST00000586856 ABCC2Q92887 1545 aa39.91■■■■□ 3.98
ERCC2-209ENST00000586856 SAMD9Q5K651 1589 aa39.89■■■■□ 3.98
ERCC2-209ENST00000586856 KIF13AQ9H1H9 1805 aa39.86■■■■□ 3.97
ERCC2-209ENST00000586856 PLB1Q6P1J6 1458 aa39.77■■■■□ 3.96
ERCC2-209ENST00000586856 ABCA8O94911 1581 aa39.76■■■■□ 3.95
ERCC2-209ENST00000586856 DIP2BQ9P265 1576 aa39.76■■■■□ 3.95
ERCC2-209ENST00000586856 ABCC10Q5T3U5 1492 aa39.75■■■■□ 3.95
ERCC2-209ENST00000586856 KDM5BQ9UGL1 1544 aa39.74■■■■□ 3.95
ERCC2-209ENST00000586856 ZCCHC11Q5TAX3 1644 aaKnown RBP39.72■■■■□ 3.95
ERCC2-209ENST00000586856 P3H3Q8IVL6 736 aa39.71■■■■□ 3.95
ERCC2-209ENST00000586856 EHMT2Q96KQ7 1210 aa39.71■■■■□ 3.95
ERCC2-209ENST00000586856 RANGAP1P46060 587 aaPredicted RBP39.67■■■■□ 3.94
ERCC2-209ENST00000586856 EFCAB5A4FU69 1503 aa39.65■■■■□ 3.94
ERCC2-209ENST00000586856 ASXL2Q76L83 1435 aa39.65■■■■□ 3.94
ERCC2-209ENST00000586856 UBTFP17480 764 aaKnown RBP39.64■■■■□ 3.94
ERCC2-209ENST00000586856 FAM69CQ0P6D2 419 aa39.6■■■■□ 3.93
ERCC2-209ENST00000586856 FHOD3Q2V2M9 1422 aa39.59■■■■□ 3.93
ERCC2-209ENST00000586856 RAPGEF6Q8TEU7 1601 aa39.53■■■■□ 3.92
ERCC2-209ENST00000586856 GLI2P10070 1586 aa39.46■■■■□ 3.91
ERCC2-209ENST00000586856 WDR7Q9Y4E6 1490 aa39.44■■■■□ 3.9
ERCC2-209ENST00000586856 EPRSP07814 1512 aaKnown RBP39.42■■■■□ 3.9
ERCC2-209ENST00000586856 TSPOAP1O95153 1857 aa39.42■■■■□ 3.9
ERCC2-209ENST00000586856 ARHGAP35Q9NRY4 1499 aa39.4■■■■□ 3.9
ERCC2-209ENST00000586856 ATP10BO94823 1461 aa39.37■■■■□ 3.89
ERCC2-209ENST00000586856 ARID3CA6NKF2 412 aa39.35■■■■□ 3.89
ERCC2-209ENST00000586856 NUP153P49790 1475 aaKnown RBP39.35■■■■□ 3.89
ERCC2-209ENST00000586856 MAP3K4Q9Y6R4 1608 aa39.32■■■■□ 3.88
ERCC2-209ENST00000586856 PPRC1Q5VV67 1664 aaKnown RBP39.3■■■■□ 3.88
ERCC2-209ENST00000586856 FMN1Q68DA7 1419 aa39.23■■■■□ 3.87
ERCC2-209ENST00000586856 CFAP43Q8NDM7 1665 aa39.17■■■■□ 3.86
ERCC2-209ENST00000586856 KDM6BO15054 1643 aa39.15■■■■□ 3.86
ERCC2-209ENST00000586856 KCNH8Q96L42 1107 aa39.15■■■■□ 3.86
ERCC2-209ENST00000586856 HECW1Q76N89 1606 aa39.14■■■■□ 3.86
ERCC2-209ENST00000586856 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.13■■■■□ 3.85
ERCC2-209ENST00000586856 HNRNPUL2Q1KMD3 747 aaKnown RBP39.13■■■■□ 3.85
ERCC2-209ENST00000586856 CLIP1P30622 1438 aa39.09■■■■□ 3.85
ERCC2-209ENST00000586856 TEX14Q8IWB6 1497 aa39.09■■■■□ 3.85
ERCC2-209ENST00000586856 CDK13Q14004 1512 aaKnown RBP39.08■■■■□ 3.85
ERCC2-209ENST00000586856 ABCA9Q8IUA7 1624 aa39.04■■■■□ 3.84
ERCC2-209ENST00000586856 CD109Q6YHK3 1445 aa39.04■■■■□ 3.84
ERCC2-209ENST00000586856 MAGI3Q5TCQ9 1506 aa39.01■■■■□ 3.84
ERCC2-209ENST00000586856 PCF11O94913 1555 aaKnown RBP39■■■■□ 3.83
ERCC2-209ENST00000586856 LRRIQ1Q96JM4 1722 aa38.97■■■■□ 3.83
ERCC2-209ENST00000586856 ATP1B4Q9UN42 357 aaPredicted RBP38.95■■■■□ 3.83
ERCC2-209ENST00000586856 PLEKHD1A6NEE1 506 aa38.93■■■■□ 3.82
ERCC2-209ENST00000586856 CASKIN1Q8WXD9 1431 aa38.91■■■■□ 3.82
ERCC2-209ENST00000586856 CEP162Q5TB80 1403 aa38.89■■■■□ 3.82
ERCC2-209ENST00000586856 COL17A1Q9UMD9 1497 aaPredicted RBP38.86■■■■□ 3.81
ERCC2-209ENST00000586856 FYCO1Q9BQS8 1478 aa38.85■■■■□ 3.81
ERCC2-209ENST00000586856 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.82■■■■□ 3.8
ERCC2-209ENST00000586856 TTC37Q6PGP7 1564 aa38.82■■■■□ 3.8
ERCC2-209ENST00000586856 CCDC18Q5T9S5 1454 aa38.8■■■■□ 3.8
ERCC2-209ENST00000586856 LOC105371045A0A1W2PR82 267 aa38.78■■■■□ 3.8
ERCC2-209ENST00000586856 CDK11AQ9UQ88 783 aaPredicted RBP38.73■■■■□ 3.79
ERCC2-209ENST00000586856 TROQ12816 1431 aaPredicted RBP38.72■■■■□ 3.79
ERCC2-209ENST00000586856 KIF14Q15058 1648 aa38.71■■■■□ 3.79
ERCC2-209ENST00000586856 NEO1Q92859 1461 aa38.7■■■■□ 3.79
ERCC2-209ENST00000586856 ARAP3Q8WWN8 1544 aa38.68■■■■□ 3.78
ERCC2-209ENST00000586856 PHLDB1Q86UU1 1377 aa38.64■■■■□ 3.78
ERCC2-209ENST00000586856 CFAP74Q9C0B2 1584 aa38.64■■■■□ 3.78
ERCC2-209ENST00000586856 MYO5CQ9NQX4 1742 aa38.61■■■■□ 3.77
ERCC2-209ENST00000586856 FANCAO15360 1455 aa38.59■■■■□ 3.77
ERCC2-209ENST00000586856 PLCH2O75038 1416 aa38.53■■■■□ 3.76
ERCC2-209ENST00000586856 FRMPD1Q5SYB0 1578 aa38.51■■■■□ 3.76
ERCC2-209ENST00000586856 AKNAQ7Z591 1439 aa38.5■■■■□ 3.75
ERCC2-209ENST00000586856 VPS8Q8N3P4 1428 aa38.43■■■■□ 3.74
ERCC2-209ENST00000586856 RICTORQ6R327 1708 aa38.43■■■■□ 3.74
ERCC2-209ENST00000586856 PREX2Q70Z35 1606 aa38.41■■■■□ 3.74
ERCC2-209ENST00000586856 DENND4BO75064 1496 aaPredicted RBP38.41■■■■□ 3.74
ERCC2-209ENST00000586856 RAPGEF3O95398 923 aa38.41■■■■□ 3.74
ERCC2-209ENST00000586856 ARHGAP5Q13017 1502 aa38.41■■■■□ 3.74
ERCC2-209ENST00000586856 CDC42BPBQ9Y5S2 1711 aa38.39■■■■□ 3.74
ERCC2-209ENST00000586856 ADGRL1O94910 1474 aa38.39■■■■□ 3.74
ERCC2-209ENST00000586856 CDC42BPAQ5VT25 1732 aa38.36■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms