RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 KIAA0586Q9BVV6 1533 aa23.4■■□□□ 1.34
TPM4-205ENST00000586833 JPH4Q96JJ6 628 aa23.4■■□□□ 1.34
TPM4-205ENST00000586833 CYB5RLQ6IPT4 315 aa23.36■■□□□ 1.33
TPM4-205ENST00000586833 PRXQ9BXM0 1461 aa23.35■■□□□ 1.33
TPM4-205ENST00000586833 FAM9AQ8IZU1 332 aaPredicted RBP23.33■■□□□ 1.33
TPM4-205ENST00000586833 PRG4Q92954 1404 aaPredicted RBP23.32■■□□□ 1.32
TPM4-205ENST00000586833 ARAP1Q96P48 1450 aa23.3■■□□□ 1.32
TPM4-205ENST00000586833 SHROOM2Q13796 1616 aa23.28■■□□□ 1.32
TPM4-205ENST00000586833 CARMIL2Q6F5E8 1435 aa23.25■■□□□ 1.31
TPM4-205ENST00000586833 IQGAP2Q13576 1575 aa23.23■■□□□ 1.31
TPM4-205ENST00000586833 ERCC6L2Q5T890 1561 aa23.15■■□□□ 1.3
TPM4-205ENST00000586833 TNIKQ9UKE5 1360 aa23.13■■□□□ 1.29
TPM4-205ENST00000586833 UGGT2Q9NYU1 1516 aa23.12■■□□□ 1.29
TPM4-205ENST00000586833 GOLGA3Q08378 1498 aa23.11■■□□□ 1.29
TPM4-205ENST00000586833 KIF21BO75037 1637 aa23.11■■□□□ 1.29
TPM4-205ENST00000586833 PTPRGP23470 1445 aa23.09■■□□□ 1.29
TPM4-205ENST00000586833 UBTFP17480 764 aaKnown RBP23.08■■□□□ 1.29
TPM4-205ENST00000586833 NPM1P06748 294 aaKnown RBP eCLIP23.06■■□□□ 1.28
TPM4-205ENST00000586833 CTTNBP2Q8WZ74 1663 aa23.05■■□□□ 1.28
TPM4-205ENST00000586833 TTBK1Q5TCY1 1321 aaPredicted RBP23.05■■□□□ 1.28
TPM4-205ENST00000586833 DISP1Q96F81 1524 aa23.03■■□□□ 1.28
TPM4-205ENST00000586833 EHMT2Q96KQ7 1210 aa22.99■■□□□ 1.27
TPM4-205ENST00000586833 KIAA0556O60303 1618 aa22.98■■□□□ 1.27
TPM4-205ENST00000586833 TRHP20396 242 aaPredicted RBP22.93■■□□□ 1.26
TPM4-205ENST00000586833 RANGAP1P46060 587 aaPredicted RBP22.93■■□□□ 1.26
TPM4-205ENST00000586833 UACAQ9BZF9 1416 aa22.92■■□□□ 1.26
TPM4-205ENST00000586833 P3H3Q8IVL6 736 aa22.9■■□□□ 1.26
TPM4-205ENST00000586833 UHRF1BP1LA0JNW5 1464 aa22.87■■□□□ 1.25
TPM4-205ENST00000586833 EFCAB5A4FU69 1503 aa22.86■■□□□ 1.25
TPM4-205ENST00000586833 SAMD9Q5K651 1589 aa22.83■■□□□ 1.25
TPM4-205ENST00000586833 ABCC2Q92887 1545 aa22.82■■□□□ 1.24
TPM4-205ENST00000586833 ADCY10Q96PN6 1610 aa22.82■■□□□ 1.24
TPM4-205ENST00000586833 FHOD3Q2V2M9 1422 aa22.77■■□□□ 1.24
TPM4-205ENST00000586833 PLB1Q6P1J6 1458 aa22.76■■□□□ 1.23
TPM4-205ENST00000586833 MAPKBP1O60336 1514 aa22.76■■□□□ 1.23
TPM4-205ENST00000586833 KDM5BQ9UGL1 1544 aa22.73■■□□□ 1.23
TPM4-205ENST00000586833 ABCA8O94911 1581 aa22.72■■□□□ 1.23
TPM4-205ENST00000586833 FMN1Q68DA7 1419 aa22.71■■□□□ 1.23
TPM4-205ENST00000586833 ARHGAP35Q9NRY4 1499 aa22.68■■□□□ 1.22
TPM4-205ENST00000586833 FAM69CQ0P6D2 419 aa22.68■■□□□ 1.22
TPM4-205ENST00000586833 ASXL2Q76L83 1435 aa22.67■■□□□ 1.22
TPM4-205ENST00000586833 ABCC10Q5T3U5 1492 aa22.66■■□□□ 1.22
TPM4-205ENST00000586833 CLIP1P30622 1438 aa22.66■■□□□ 1.22
TPM4-205ENST00000586833 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.66■■□□□ 1.22
TPM4-205ENST00000586833 HNRNPUL2Q1KMD3 747 aaKnown RBP22.66■■□□□ 1.22
TPM4-205ENST00000586833 RAPGEF6Q8TEU7 1601 aa22.62■■□□□ 1.21
TPM4-205ENST00000586833 ATP1B4Q9UN42 357 aaPredicted RBP22.61■■□□□ 1.21
TPM4-205ENST00000586833 ARID3CA6NKF2 412 aa22.6■■□□□ 1.21
TPM4-205ENST00000586833 ZCCHC11Q5TAX3 1644 aaKnown RBP22.6■■□□□ 1.21
TPM4-205ENST00000586833 ATP10BO94823 1461 aa22.58■■□□□ 1.2
TPM4-205ENST00000586833 WDR7Q9Y4E6 1490 aa22.58■■□□□ 1.2
TPM4-205ENST00000586833 LOC105371045A0A1W2PR82 267 aa22.57■■□□□ 1.2
TPM4-205ENST00000586833 NUP153P49790 1475 aaKnown RBP22.55■■□□□ 1.2
TPM4-205ENST00000586833 CEP162Q5TB80 1403 aa22.55■■□□□ 1.2
TPM4-205ENST00000586833 PLEKHD1A6NEE1 506 aa22.54■■□□□ 1.2
TPM4-205ENST00000586833 CDK11AQ9UQ88 783 aaPredicted RBP22.54■■□□□ 1.2
TPM4-205ENST00000586833 DIP2BQ9P265 1576 aa22.54■■□□□ 1.2
TPM4-205ENST00000586833 KCNH8Q96L42 1107 aa22.52■■□□□ 1.2
TPM4-205ENST00000586833 EPRSP07814 1512 aaKnown RBP22.52■■□□□ 1.19
TPM4-205ENST00000586833 GLI2P10070 1586 aa22.5■■□□□ 1.19
TPM4-205ENST00000586833 HECW1Q76N89 1606 aa22.49■■□□□ 1.19
TPM4-205ENST00000586833 CASKIN1Q8WXD9 1431 aa22.48■■□□□ 1.19
TPM4-205ENST00000586833 CCDC18Q5T9S5 1454 aa22.43■■□□□ 1.18
TPM4-205ENST00000586833 FYCO1Q9BQS8 1478 aa22.42■■□□□ 1.18
TPM4-205ENST00000586833 TEX14Q8IWB6 1497 aa22.41■■□□□ 1.18
TPM4-205ENST00000586833 CD109Q6YHK3 1445 aa22.4■■□□□ 1.18
TPM4-205ENST00000586833 KIF13AQ9H1H9 1805 aa22.4■■□□□ 1.18
TPM4-205ENST00000586833 CDK13Q14004 1512 aaKnown RBP22.37■■□□□ 1.17
TPM4-205ENST00000586833 PCF11O94913 1555 aaKnown RBP22.35■■□□□ 1.17
TPM4-205ENST00000586833 TROQ12816 1431 aaPredicted RBP22.31■■□□□ 1.16
TPM4-205ENST00000586833 MAGI3Q5TCQ9 1506 aa22.31■■□□□ 1.16
TPM4-205ENST00000586833 MAP3K4Q9Y6R4 1608 aa22.31■■□□□ 1.16
TPM4-205ENST00000586833 VPS8Q8N3P4 1428 aa22.3■■□□□ 1.16
TPM4-205ENST00000586833 CFAP43Q8NDM7 1665 aa22.3■■□□□ 1.16
TPM4-205ENST00000586833 PHLDB1Q86UU1 1377 aa22.28■■□□□ 1.16
TPM4-205ENST00000586833 ABCA9Q8IUA7 1624 aa22.26■■□□□ 1.15
TPM4-205ENST00000586833 APLP2Q06481 763 aa22.24■■□□□ 1.15
TPM4-205ENST00000586833 MTUS2Q5JR59 1369 aa22.23■■□□□ 1.15
TPM4-205ENST00000586833 TSPOAP1O95153 1857 aa22.22■■□□□ 1.15
TPM4-205ENST00000586833 KDM6BO15054 1643 aa22.21■■□□□ 1.15
TPM4-205ENST00000586833 KIF14Q15058 1648 aa22.21■■□□□ 1.15
TPM4-205ENST00000586833 NEO1Q92859 1461 aa22.2■■□□□ 1.14
TPM4-205ENST00000586833 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.2■■□□□ 1.141e-6■■□□□ 14.3
TPM4-205ENST00000586833 EFCAB2Q5VUJ9 269 aa22.17■■□□□ 1.14
TPM4-205ENST00000586833 PPRC1Q5VV67 1664 aaKnown RBP22.17■■□□□ 1.14
TPM4-205ENST00000586833 PLCH2O75038 1416 aa22.16■■□□□ 1.14
TPM4-205ENST00000586833 FANCAO15360 1455 aa22.14■■□□□ 1.13
TPM4-205ENST00000586833 TTC37Q6PGP7 1564 aa22.12■■□□□ 1.13
TPM4-205ENST00000586833 CFAP74Q9C0B2 1584 aa22.12■■□□□ 1.13
TPM4-205ENST00000586833 EHBP1L1Q8N3D4 1523 aa22.11■■□□□ 1.13
TPM4-205ENST00000586833 ARAP3Q8WWN8 1544 aa22.11■■□□□ 1.13
TPM4-205ENST00000586833 AKNAQ7Z591 1439 aa22.1■■□□□ 1.13
TPM4-205ENST00000586833 LRRIQ1Q96JM4 1722 aa22.09■■□□□ 1.13
TPM4-205ENST00000586833 MAP3K1Q13233 1512 aa22.09■■□□□ 1.13
TPM4-205ENST00000586833 CCNB3Q8WWL7 1395 aa22.08■■□□□ 1.12
TPM4-205ENST00000586833 ARHGAP5Q13017 1502 aa22.06■■□□□ 1.12
TPM4-205ENST00000586833 DENND4BO75064 1496 aaPredicted RBP22.06■■□□□ 1.12
TPM4-205ENST00000586833 TIAM1Q13009 1591 aa22.06■■□□□ 1.12
TPM4-205ENST00000586833 COL17A1Q9UMD9 1497 aaPredicted RBP22.05■■□□□ 1.12
TPM4-205ENST00000586833 CFDP1Q9UEE9 299 aaPredicted RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms