RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 RIMBP3Q9UFD9 1639 aa35.69■■■■□ 3.3
RETREG3-204ENST00000586796 PRXQ9BXM0 1461 aa35.64■■■■□ 3.3
RETREG3-204ENST00000586796 KIAA0586Q9BVV6 1533 aa35.58■■■■□ 3.29
RETREG3-204ENST00000586796 JPH4Q96JJ6 628 aa35.58■■■■□ 3.29
RETREG3-204ENST00000586796 SHROOM2Q13796 1616 aa35.51■■■■□ 3.28
RETREG3-204ENST00000586796 CYB5RLQ6IPT4 315 aa35.49■■■■□ 3.27
RETREG3-204ENST00000586796 ERCC6L2Q5T890 1561 aa35.48■■■■□ 3.27
RETREG3-204ENST00000586796 PRG4Q92954 1404 aaPredicted RBP35.48■■■■□ 3.27
RETREG3-204ENST00000586796 ARAP1Q96P48 1450 aa35.46■■■■□ 3.27
RETREG3-204ENST00000586796 EHMT2Q96KQ7 1210 aa35.44■■■■□ 3.26
RETREG3-204ENST00000586796 IQGAP2Q13576 1575 aa35.42■■■■□ 3.26
RETREG3-204ENST00000586796 KIF21BO75037 1637 aa35.34■■■■□ 3.25
RETREG3-204ENST00000586796 CTTNBP2Q8WZ74 1663 aa35.33■■■■□ 3.25
RETREG3-204ENST00000586796 CARMIL2Q6F5E8 1435 aa35.23■■■■□ 3.23
RETREG3-204ENST00000586796 UBTFP17480 764 aaKnown RBP35.22■■■■□ 3.23
RETREG3-204ENST00000586796 TTBK1Q5TCY1 1321 aaPredicted RBP35.22■■■■□ 3.23
RETREG3-204ENST00000586796 UGGT2Q9NYU1 1516 aa35.22■■■■□ 3.23
RETREG3-204ENST00000586796 GOLGA3Q08378 1498 aa35.21■■■■□ 3.23
RETREG3-204ENST00000586796 RANGAP1P46060 587 aaPredicted RBP35.18■■■■□ 3.22
RETREG3-204ENST00000586796 DISP1Q96F81 1524 aa35.16■■■■□ 3.22
RETREG3-204ENST00000586796 TNIKQ9UKE5 1360 aa35.1■■■■□ 3.21
RETREG3-204ENST00000586796 PTPRGP23470 1445 aa35.09■■■■□ 3.21
RETREG3-204ENST00000586796 KIAA0556O60303 1618 aa35.08■■■■□ 3.21
RETREG3-204ENST00000586796 P3H3Q8IVL6 736 aa35.05■■■■□ 3.2
RETREG3-204ENST00000586796 SAMD9Q5K651 1589 aa34.89■■■■□ 3.18
RETREG3-204ENST00000586796 ADCY10Q96PN6 1610 aa34.85■■■■□ 3.17
RETREG3-204ENST00000586796 NPM1P06748 294 aaKnown RBP eCLIP34.84■■■■□ 3.17
RETREG3-204ENST00000586796 UACAQ9BZF9 1416 aa34.83■■■■□ 3.17
RETREG3-204ENST00000586796 FHOD3Q2V2M9 1422 aa34.81■■■■□ 3.16
RETREG3-204ENST00000586796 LOC105371045A0A1W2PR82 267 aa34.8■■■■□ 3.16
RETREG3-204ENST00000586796 EFCAB5A4FU69 1503 aa34.79■■■■□ 3.16
RETREG3-204ENST00000586796 PLB1Q6P1J6 1458 aa34.78■■■■□ 3.16
RETREG3-204ENST00000586796 TRHP20396 242 aaPredicted RBP34.74■■■■□ 3.15
RETREG3-204ENST00000586796 UHRF1BP1LA0JNW5 1464 aa34.73■■■■□ 3.15
RETREG3-204ENST00000586796 ABCC2Q92887 1545 aa34.73■■■■□ 3.15
RETREG3-204ENST00000586796 ARHGAP35Q9NRY4 1499 aa34.71■■■■□ 3.15
RETREG3-204ENST00000586796 ABCA8O94911 1581 aa34.67■■■■□ 3.14
RETREG3-204ENST00000586796 ARID3CA6NKF2 412 aa34.62■■■■□ 3.13
RETREG3-204ENST00000586796 CLIP1P30622 1438 aa34.61■■■■□ 3.13
RETREG3-204ENST00000586796 KDM5BQ9UGL1 1544 aa34.57■■■■□ 3.12
RETREG3-204ENST00000586796 RAPGEF6Q8TEU7 1601 aa34.55■■■■□ 3.12
RETREG3-204ENST00000586796 MAPKBP1O60336 1514 aa34.55■■■■□ 3.12
RETREG3-204ENST00000586796 ZCCHC11Q5TAX3 1644 aaKnown RBP34.53■■■■□ 3.12
RETREG3-204ENST00000586796 FMN1Q68DA7 1419 aa34.51■■■■□ 3.12
RETREG3-204ENST00000586796 CEP162Q5TB80 1403 aa34.5■■■■□ 3.11
RETREG3-204ENST00000586796 ATP1B4Q9UN42 357 aaPredicted RBP34.5■■■■□ 3.11
RETREG3-204ENST00000586796 ASXL2Q76L83 1435 aa34.48■■■■□ 3.11
RETREG3-204ENST00000586796 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.47■■■■□ 3.11
RETREG3-204ENST00000586796 HNRNPUL2Q1KMD3 747 aaKnown RBP34.47■■■■□ 3.11
RETREG3-204ENST00000586796 NUP153P49790 1475 aaKnown RBP34.45■■■■□ 3.1
RETREG3-204ENST00000586796 ATP10BO94823 1461 aa34.44■■■■□ 3.1
RETREG3-204ENST00000586796 FAM69CQ0P6D2 419 aa34.43■■■■□ 3.1
RETREG3-204ENST00000586796 ABCC10Q5T3U5 1492 aa34.39■■■■□ 3.1
RETREG3-204ENST00000586796 DIP2BQ9P265 1576 aa34.34■■■■□ 3.09
RETREG3-204ENST00000586796 KCNH8Q96L42 1107 aa34.32■■■■□ 3.08
RETREG3-204ENST00000586796 WDR7Q9Y4E6 1490 aa34.32■■■■□ 3.08
RETREG3-204ENST00000586796 KIF13AQ9H1H9 1805 aa34.32■■■■□ 3.08
RETREG3-204ENST00000586796 HECW1Q76N89 1606 aa34.3■■■■□ 3.08
RETREG3-204ENST00000586796 PCF11O94913 1555 aaKnown RBP34.27■■■■□ 3.08
RETREG3-204ENST00000586796 EPRSP07814 1512 aaKnown RBP34.26■■■■□ 3.08
RETREG3-204ENST00000586796 CDK13Q14004 1512 aaKnown RBP34.26■■■■□ 3.08
RETREG3-204ENST00000586796 CASKIN1Q8WXD9 1431 aa34.26■■■■□ 3.07
RETREG3-204ENST00000586796 PLEKHD1A6NEE1 506 aa34.22■■■■□ 3.07
RETREG3-204ENST00000586796 GLI2P10070 1586 aa34.17■■■■□ 3.06
RETREG3-204ENST00000586796 FYCO1Q9BQS8 1478 aa34.17■■■■□ 3.06
RETREG3-204ENST00000586796 LRRIQ1Q96JM4 1722 aa34.13■■■■□ 3.05
RETREG3-204ENST00000586796 CDK11AQ9UQ88 783 aaPredicted RBP34.11■■■■□ 3.05
RETREG3-204ENST00000586796 TSPOAP1O95153 1857 aa34.1■■■■□ 3.05
RETREG3-204ENST00000586796 CCDC18Q5T9S5 1454 aa34.08■■■■□ 3.05
RETREG3-204ENST00000586796 VPS8Q8N3P4 1428 aa34.04■■■■□ 3.04
RETREG3-204ENST00000586796 MAP3K4Q9Y6R4 1608 aa34.04■■■■□ 3.04
RETREG3-204ENST00000586796 CD109Q6YHK3 1445 aa34.02■■■■□ 3.04
RETREG3-204ENST00000586796 CFAP43Q8NDM7 1665 aa33.96■■■■□ 3.03
RETREG3-204ENST00000586796 TROQ12816 1431 aaPredicted RBP33.96■■■■□ 3.03
RETREG3-204ENST00000586796 ABCA9Q8IUA7 1624 aa33.94■■■■□ 3.02
RETREG3-204ENST00000586796 PPRC1Q5VV67 1664 aaKnown RBP33.94■■■■□ 3.02
RETREG3-204ENST00000586796 MAGI3Q5TCQ9 1506 aa33.91■■■■□ 3.02
RETREG3-204ENST00000586796 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.9■■■■□ 3.026e-6■■■■■ 38.2
RETREG3-204ENST00000586796 TEX14Q8IWB6 1497 aa33.89■■■■□ 3.02
RETREG3-204ENST00000586796 KIF14Q15058 1648 aa33.86■■■■□ 3.01
RETREG3-204ENST00000586796 TTC37Q6PGP7 1564 aa33.85■■■■□ 3.01
RETREG3-204ENST00000586796 MTUS2Q5JR59 1369 aa33.84■■■■□ 3.01
RETREG3-204ENST00000586796 KDM6BO15054 1643 aa33.77■■■■□ 3
RETREG3-204ENST00000586796 TIAM1Q13009 1591 aa33.77■■■■□ 3
RETREG3-204ENST00000586796 APLP2Q06481 763 aa33.76■■■□□ 2.99
RETREG3-204ENST00000586796 PLCH2O75038 1416 aa33.71■■■□□ 2.99
RETREG3-204ENST00000586796 EHBP1L1Q8N3D4 1523 aa33.71■■■□□ 2.99
RETREG3-204ENST00000586796 FANCAO15360 1455 aa33.68■■■□□ 2.98
RETREG3-204ENST00000586796 COL17A1Q9UMD9 1497 aaPredicted RBP33.68■■■□□ 2.98
RETREG3-204ENST00000586796 KANK4Q5T7N3 995 aaPredicted RBP33.67■■■□□ 2.98
RETREG3-204ENST00000586796 MYO5CQ9NQX4 1742 aa33.67■■■□□ 2.98
RETREG3-204ENST00000586796 NEO1Q92859 1461 aa33.66■■■□□ 2.98
RETREG3-204ENST00000586796 MAP3K1Q13233 1512 aa33.65■■■□□ 2.98
RETREG3-204ENST00000586796 LRRC9Q6ZRR7 1453 aa33.64■■■□□ 2.98
RETREG3-204ENST00000586796 EFCAB2Q5VUJ9 269 aa33.63■■■□□ 2.97
RETREG3-204ENST00000586796 ARHGAP5Q13017 1502 aa33.62■■■□□ 2.97
RETREG3-204ENST00000586796 AKNAQ7Z591 1439 aa33.62■■■□□ 2.97
RETREG3-204ENST00000586796 PHLDB1Q86UU1 1377 aa33.61■■■□□ 2.97
RETREG3-204ENST00000586796 CCNB3Q8WWL7 1395 aa33.6■■■□□ 2.97
RETREG3-204ENST00000586796 CFAP74Q9C0B2 1584 aa33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms