RNA–Protein interactions for RNA: ENST00000586709.1

LAMA3-205, Transcript of laminin subunit alpha 3, humanhuman

TSL 3

Gene LAMA3, Length 637 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-205ENST00000586709 CHMP7Q8WUX9 453 aaPredicted RBP17.39■□□□□ 0.37
LAMA3-205ENST00000586709 ADAMTS12P58397 1594 aa17.39■□□□□ 0.37
LAMA3-205ENST00000586709 TRIM41Q8WV44 630 aa17.38■□□□□ 0.37
LAMA3-205ENST00000586709 ERICH3Q5RHP9 1530 aa17.37■□□□□ 0.37
LAMA3-205ENST00000586709 HOXD11P31277 338 aaPredicted RBP17.35■□□□□ 0.37
LAMA3-205ENST00000586709 GRIN2AQ12879 1464 aa17.31■□□□□ 0.36
LAMA3-205ENST00000586709 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
LAMA3-205ENST00000586709 ARAP1Q96P48 1450 aa17.26■□□□□ 0.35
LAMA3-205ENST00000586709 CEP170Q5SW79 1584 aa17.26■□□□□ 0.35
LAMA3-205ENST00000586709 NUP160Q12769 1436 aa17.23■□□□□ 0.35
LAMA3-205ENST00000586709 C1QBPQ07021 282 aaKnown RBP17.23■□□□□ 0.35
LAMA3-205ENST00000586709 CUL7Q14999 1698 aa17.23■□□□□ 0.35
LAMA3-205ENST00000586709 KIF27Q86VH2 1401 aa17.22■□□□□ 0.35
LAMA3-205ENST00000586709 CYB5RLQ6IPT4 315 aa17.19■□□□□ 0.34
LAMA3-205ENST00000586709 SHROOM2Q13796 1616 aa17.18■□□□□ 0.34
LAMA3-205ENST00000586709 PPP4R3CPQ6ZMV5 832 aa17.17■□□□□ 0.34
LAMA3-205ENST00000586709 IGF1RP08069 1367 aa17.15■□□□□ 0.34
LAMA3-205ENST00000586709 RUSC2Q8N2Y8 1516 aa17.14■□□□□ 0.33
LAMA3-205ENST00000586709 ERCC6L2Q5T890 1561 aa17.12■□□□□ 0.33
LAMA3-205ENST00000586709 RNF216Q9NWF9 866 aaPredicted RBP17.07■□□□□ 0.32
LAMA3-205ENST00000586709 CARMIL1Q5VZK9 1371 aa17.05■□□□□ 0.32
LAMA3-205ENST00000586709 CNKSR2Q8WXI2 1034 aa17.05■□□□□ 0.32
LAMA3-205ENST00000586709 KIAA0586Q9BVV6 1533 aa17.02■□□□□ 0.32
LAMA3-205ENST00000586709 PRG4Q92954 1404 aaPredicted RBP17.02■□□□□ 0.31
LAMA3-205ENST00000586709 JPH4Q96JJ6 628 aa17.01■□□□□ 0.31
LAMA3-205ENST00000586709 RAPGEF2Q9Y4G8 1499 aa16.96■□□□□ 0.31
LAMA3-205ENST00000586709 IQGAP2Q13576 1575 aa16.95■□□□□ 0.3
LAMA3-205ENST00000586709 CTTNBP2Q8WZ74 1663 aa16.93■□□□□ 0.3
LAMA3-205ENST00000586709 TRHP20396 242 aaPredicted RBP16.9■□□□□ 0.3
LAMA3-205ENST00000586709 PRXQ9BXM0 1461 aa16.86■□□□□ 0.29
LAMA3-205ENST00000586709 ADCY10Q96PN6 1610 aa16.85■□□□□ 0.29
LAMA3-205ENST00000586709 CARMIL2Q6F5E8 1435 aa16.84■□□□□ 0.29
LAMA3-205ENST00000586709 UGGT2Q9NYU1 1516 aa16.83■□□□□ 0.28
LAMA3-205ENST00000586709 DISP1Q96F81 1524 aa16.81■□□□□ 0.28
LAMA3-205ENST00000586709 KIF13AQ9H1H9 1805 aa16.81■□□□□ 0.28
LAMA3-205ENST00000586709 KIAA0556O60303 1618 aa16.8■□□□□ 0.28
LAMA3-205ENST00000586709 EEA1Q15075 1411 aa16.79■□□□□ 0.28
LAMA3-205ENST00000586709 TNIKQ9UKE5 1360 aa16.79■□□□□ 0.28
LAMA3-205ENST00000586709 PTPRGP23470 1445 aa16.78■□□□□ 0.28
LAMA3-205ENST00000586709 MAPKBP1O60336 1514 aa16.76■□□□□ 0.27
LAMA3-205ENST00000586709 CSRNP3Q8WYN3 585 aa16.75■□□□□ 0.27
LAMA3-205ENST00000586709 NPM1P06748 294 aaKnown RBP eCLIP16.73■□□□□ 0.27
LAMA3-205ENST00000586709 TTBK1Q5TCY1 1321 aaPredicted RBP16.72■□□□□ 0.27
LAMA3-205ENST00000586709 GOLGA3Q08378 1498 aa16.72■□□□□ 0.27
LAMA3-205ENST00000586709 UHRF1BP1LA0JNW5 1464 aa16.7■□□□□ 0.26
LAMA3-205ENST00000586709 ABCC2Q92887 1545 aa16.7■□□□□ 0.26
LAMA3-205ENST00000586709 DIP2BQ9P265 1576 aa16.69■□□□□ 0.26
LAMA3-205ENST00000586709 KIF21BO75037 1637 aa16.69■□□□□ 0.26
LAMA3-205ENST00000586709 UACAQ9BZF9 1416 aa16.68■□□□□ 0.26
LAMA3-205ENST00000586709 ABCC10Q5T3U5 1492 aa16.67■□□□□ 0.26
LAMA3-205ENST00000586709 FAM9AQ8IZU1 332 aaPredicted RBP16.65■□□□□ 0.26
LAMA3-205ENST00000586709 ZCCHC11Q5TAX3 1644 aaKnown RBP16.64■□□□□ 0.25
LAMA3-205ENST00000586709 SAMD9Q5K651 1589 aa16.64■□□□□ 0.25
LAMA3-205ENST00000586709 TSPOAP1O95153 1857 aa16.63■□□□□ 0.25
LAMA3-205ENST00000586709 KDM5BQ9UGL1 1544 aa16.62■□□□□ 0.25
LAMA3-205ENST00000586709 ABCA8O94911 1581 aa16.61■□□□□ 0.25
LAMA3-205ENST00000586709 FAM69CQ0P6D2 419 aa16.6■□□□□ 0.25
LAMA3-205ENST00000586709 PLB1Q6P1J6 1458 aa16.6■□□□□ 0.25
LAMA3-205ENST00000586709 ASXL2Q76L83 1435 aa16.59■□□□□ 0.25
LAMA3-205ENST00000586709 GLI2P10070 1586 aa16.55■□□□□ 0.24
LAMA3-205ENST00000586709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.54■□□□□ 0.24
LAMA3-205ENST00000586709 EFCAB5A4FU69 1503 aa16.52■□□□□ 0.24
LAMA3-205ENST00000586709 P3H3Q8IVL6 736 aa16.52■□□□□ 0.24
LAMA3-205ENST00000586709 PPRC1Q5VV67 1664 aaKnown RBP16.52■□□□□ 0.23
LAMA3-205ENST00000586709 RAPGEF6Q8TEU7 1601 aa16.52■□□□□ 0.23
LAMA3-205ENST00000586709 EPRSP07814 1512 aaKnown RBP16.5■□□□□ 0.23
LAMA3-205ENST00000586709 MAP3K4Q9Y6R4 1608 aa16.5■□□□□ 0.23
LAMA3-205ENST00000586709 WDR7Q9Y4E6 1490 aa16.49■□□□□ 0.23
LAMA3-205ENST00000586709 FHOD3Q2V2M9 1422 aa16.47■□□□□ 0.23
LAMA3-205ENST00000586709 RANGAP1P46060 587 aaPredicted RBP16.47■□□□□ 0.23
LAMA3-205ENST00000586709 KDM6BO15054 1643 aa16.47■□□□□ 0.23
LAMA3-205ENST00000586709 POTEHQ6S545 545 aa16.46■□□□□ 0.23
LAMA3-205ENST00000586709 EHMT2Q96KQ7 1210 aa16.45■□□□□ 0.22
LAMA3-205ENST00000586709 CFAP43Q8NDM7 1665 aa16.45■□□□□ 0.22
LAMA3-205ENST00000586709 UBTFP17480 764 aaKnown RBP16.44■□□□□ 0.22
LAMA3-205ENST00000586709 ATP10BO94823 1461 aa16.43■□□□□ 0.22
LAMA3-205ENST00000586709 NCBP3Q53F19 620 aaKnown RBP16.4■□□□□ 0.22
LAMA3-205ENST00000586709 NUP153P49790 1475 aaKnown RBP16.4■□□□□ 0.22
LAMA3-205ENST00000586709 TEX14Q8IWB6 1497 aa16.39■□□□□ 0.21
LAMA3-205ENST00000586709 ARID3CA6NKF2 412 aa16.38■□□□□ 0.21
LAMA3-205ENST00000586709 ARHGAP35Q9NRY4 1499 aa16.37■□□□□ 0.21
LAMA3-205ENST00000586709 ABCA9Q8IUA7 1624 aa16.35■□□□□ 0.21
LAMA3-205ENST00000586709 KCNH8Q96L42 1107 aa16.35■□□□□ 0.21
LAMA3-205ENST00000586709 CD109Q6YHK3 1445 aa16.34■□□□□ 0.21
LAMA3-205ENST00000586709 MAGI3Q5TCQ9 1506 aa16.34■□□□□ 0.21
LAMA3-205ENST00000586709 FMN1Q68DA7 1419 aa16.33■□□□□ 0.2
LAMA3-205ENST00000586709 HECW1Q76N89 1606 aa16.32■□□□□ 0.2
LAMA3-205ENST00000586709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
LAMA3-205ENST00000586709 HNRNPUL2Q1KMD3 747 aaKnown RBP16.3■□□□□ 0.2
LAMA3-205ENST00000586709 LRRIQ1Q96JM4 1722 aa16.29■□□□□ 0.2
LAMA3-205ENST00000586709 CDK13Q14004 1512 aaKnown RBP16.29■□□□□ 0.2
LAMA3-205ENST00000586709 COL17A1Q9UMD9 1497 aaPredicted RBP16.28■□□□□ 0.2
LAMA3-205ENST00000586709 PCF11O94913 1555 aaKnown RBP16.23■□□□□ 0.19
LAMA3-205ENST00000586709 PLEKHD1A6NEE1 506 aa16.23■□□□□ 0.19
LAMA3-205ENST00000586709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.22■□□□□ 0.19
LAMA3-205ENST00000586709 TTC37Q6PGP7 1564 aa16.21■□□□□ 0.19
LAMA3-205ENST00000586709 CLIP1P30622 1438 aa16.2■□□□□ 0.18
LAMA3-205ENST00000586709 ARAP3Q8WWN8 1544 aa16.2■□□□□ 0.18
LAMA3-205ENST00000586709 ATP1B4Q9UN42 357 aaPredicted RBP16.2■□□□□ 0.18
LAMA3-205ENST00000586709 CFAP74Q9C0B2 1584 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms