RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 CARMIL1Q5VZK9 1371 aa27.25■■□□□ 1.95
ATG4D-205ENST00000586477 JPH4Q96JJ6 628 aa27.24■■□□□ 1.95
ATG4D-205ENST00000586477 PRG4Q92954 1404 aaPredicted RBP27.24■■□□□ 1.95
ATG4D-205ENST00000586477 KIAA0586Q9BVV6 1533 aa27.21■■□□□ 1.95
ATG4D-205ENST00000586477 RAPGEF2Q9Y4G8 1499 aa27.05■■□□□ 1.92
ATG4D-205ENST00000586477 CHIC1Q5VXU3 224 aa27.01■■□□□ 1.91
ATG4D-205ENST00000586477 IQGAP2Q13576 1575 aa27.01■■□□□ 1.91
ATG4D-205ENST00000586477 ADCY10Q96PN6 1610 aa26.94■■□□□ 1.9
ATG4D-205ENST00000586477 PRXQ9BXM0 1461 aa26.93■■□□□ 1.9
ATG4D-205ENST00000586477 DISP1Q96F81 1524 aa26.9■■□□□ 1.9
ATG4D-205ENST00000586477 UGGT2Q9NYU1 1516 aa26.88■■□□□ 1.89
ATG4D-205ENST00000586477 CTTNBP2Q8WZ74 1663 aa26.87■■□□□ 1.89
ATG4D-205ENST00000586477 CARMIL2Q6F5E8 1435 aa26.84■■□□□ 1.89
ATG4D-205ENST00000586477 TNIKQ9UKE5 1360 aa26.84■■□□□ 1.89
ATG4D-205ENST00000586477 KIF13AQ9H1H9 1805 aa26.83■■□□□ 1.89
ATG4D-205ENST00000586477 PTPRGP23470 1445 aa26.83■■□□□ 1.89
ATG4D-205ENST00000586477 KIAA0556O60303 1618 aa26.79■■□□□ 1.88
ATG4D-205ENST00000586477 MAPKBP1O60336 1514 aa26.78■■□□□ 1.88
ATG4D-205ENST00000586477 TTBK1Q5TCY1 1321 aaPredicted RBP26.75■■□□□ 1.87
ATG4D-205ENST00000586477 CSRNP3Q8WYN3 585 aa26.75■■□□□ 1.87
ATG4D-205ENST00000586477 EEA1Q15075 1411 aa26.7■■□□□ 1.86
ATG4D-205ENST00000586477 UHRF1BP1LA0JNW5 1464 aa26.69■■□□□ 1.86
ATG4D-205ENST00000586477 ABCC10Q5T3U5 1492 aa26.69■■□□□ 1.86
ATG4D-205ENST00000586477 DIP2BQ9P265 1576 aa26.68■■□□□ 1.86
ATG4D-205ENST00000586477 NPM1P06748 294 aaKnown RBP eCLIP26.68■■□□□ 1.86
ATG4D-205ENST00000586477 ABCC2Q92887 1545 aa26.68■■□□□ 1.86
ATG4D-205ENST00000586477 UACAQ9BZF9 1416 aa26.66■■□□□ 1.86
ATG4D-205ENST00000586477 GOLGA3Q08378 1498 aa26.61■■□□□ 1.85
ATG4D-205ENST00000586477 FAM69CQ0P6D2 419 aa26.6■■□□□ 1.85
ATG4D-205ENST00000586477 FAM9AQ8IZU1 332 aaPredicted RBP26.59■■□□□ 1.85
ATG4D-205ENST00000586477 KDM5BQ9UGL1 1544 aa26.58■■□□□ 1.85
ATG4D-205ENST00000586477 PLB1Q6P1J6 1458 aa26.55■■□□□ 1.84
ATG4D-205ENST00000586477 ASXL2Q76L83 1435 aa26.55■■□□□ 1.84
ATG4D-205ENST00000586477 ZCCHC11Q5TAX3 1644 aaKnown RBP26.54■■□□□ 1.84
ATG4D-205ENST00000586477 ABCA8O94911 1581 aa26.54■■□□□ 1.84
ATG4D-205ENST00000586477 KIF21BO75037 1637 aa26.54■■□□□ 1.84
ATG4D-205ENST00000586477 SAMD9Q5K651 1589 aa26.53■■□□□ 1.84
ATG4D-205ENST00000586477 TSPOAP1O95153 1857 aa26.47■■□□□ 1.83
ATG4D-205ENST00000586477 P3H3Q8IVL6 736 aa26.45■■□□□ 1.82
ATG4D-205ENST00000586477 GLI2P10070 1586 aa26.45■■□□□ 1.82
ATG4D-205ENST00000586477 PPRC1Q5VV67 1664 aaKnown RBP26.42■■□□□ 1.82
ATG4D-205ENST00000586477 AEBP2Q6ZN18 517 aaPredicted RBP26.42■■□□□ 1.82
ATG4D-205ENST00000586477 EPRSP07814 1512 aaKnown RBP26.4■■□□□ 1.82
ATG4D-205ENST00000586477 WDR7Q9Y4E6 1490 aa26.35■■□□□ 1.81
ATG4D-205ENST00000586477 MAP3K4Q9Y6R4 1608 aa26.34■■□□□ 1.81
ATG4D-205ENST00000586477 RANGAP1P46060 587 aaPredicted RBP26.32■■□□□ 1.8
ATG4D-205ENST00000586477 FHOD3Q2V2M9 1422 aa26.31■■□□□ 1.8
ATG4D-205ENST00000586477 RAPGEF6Q8TEU7 1601 aa26.3■■□□□ 1.8
ATG4D-205ENST00000586477 ATP10BO94823 1461 aa26.3■■□□□ 1.8
ATG4D-205ENST00000586477 KDM6BO15054 1643 aa26.29■■□□□ 1.8
ATG4D-205ENST00000586477 EHMT2Q96KQ7 1210 aa26.28■■□□□ 1.8
ATG4D-205ENST00000586477 EFCAB5A4FU69 1503 aa26.27■■□□□ 1.8
ATG4D-205ENST00000586477 ARID3CA6NKF2 412 aa26.24■■□□□ 1.79
ATG4D-205ENST00000586477 NUP153P49790 1475 aaKnown RBP26.23■■□□□ 1.79
ATG4D-205ENST00000586477 UBTFP17480 764 aaKnown RBP26.2■■□□□ 1.78
ATG4D-205ENST00000586477 CFAP43Q8NDM7 1665 aa26.18■■□□□ 1.78
ATG4D-205ENST00000586477 COL17A1Q9UMD9 1497 aaPredicted RBP26.17■■□□□ 1.78
ATG4D-205ENST00000586477 KCNH8Q96L42 1107 aa26.17■■□□□ 1.78
ATG4D-205ENST00000586477 ARHGAP35Q9NRY4 1499 aa26.16■■□□□ 1.78
ATG4D-205ENST00000586477 TEX14Q8IWB6 1497 aa26.12■■□□□ 1.77
ATG4D-205ENST00000586477 CD109Q6YHK3 1445 aa26.12■■□□□ 1.77
ATG4D-205ENST00000586477 MAGI3Q5TCQ9 1506 aa26.11■■□□□ 1.77
ATG4D-205ENST00000586477 ABCA9Q8IUA7 1624 aa26.08■■□□□ 1.77
ATG4D-205ENST00000586477 CDK13Q14004 1512 aaKnown RBP26.01■■□□□ 1.75
ATG4D-205ENST00000586477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26■■□□□ 1.75
ATG4D-205ENST00000586477 HNRNPUL2Q1KMD3 747 aaKnown RBP26■■□□□ 1.75
ATG4D-205ENST00000586477 FMN1Q68DA7 1419 aa25.98■■□□□ 1.75
ATG4D-205ENST00000586477 LRRIQ1Q96JM4 1722 aa25.95■■□□□ 1.74
ATG4D-205ENST00000586477 HECW1Q76N89 1606 aa25.95■■□□□ 1.74
ATG4D-205ENST00000586477 PLEKHD1A6NEE1 506 aa25.91■■□□□ 1.74
ATG4D-205ENST00000586477 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.9■■□□□ 1.74
ATG4D-205ENST00000586477 ARAP3Q8WWN8 1544 aa25.9■■□□□ 1.74
ATG4D-205ENST00000586477 TTC37Q6PGP7 1564 aa25.9■■□□□ 1.74
ATG4D-205ENST00000586477 KDM4FA0A1W2PPD8 638 aa25.89■■□□□ 1.74
ATG4D-205ENST00000586477 PCF11O94913 1555 aaKnown RBP25.86■■□□□ 1.73
ATG4D-205ENST00000586477 NEO1Q92859 1461 aa25.85■■□□□ 1.73
ATG4D-205ENST00000586477 LOC105371045A0A1W2PR82 267 aa25.83■■□□□ 1.73
ATG4D-205ENST00000586477 ATP1B4Q9UN42 357 aaPredicted RBP25.83■■□□□ 1.73
ATG4D-205ENST00000586477 CLIP1P30622 1438 aa25.82■■□□□ 1.72
ATG4D-205ENST00000586477 PHLDB1Q86UU1 1377 aa25.81■■□□□ 1.72
ATG4D-205ENST00000586477 CASKIN1Q8WXD9 1431 aa25.8■■□□□ 1.72
ATG4D-205ENST00000586477 FRMPD1Q5SYB0 1578 aa25.8■■□□□ 1.72
ATG4D-205ENST00000586477 KIF14Q15058 1648 aa25.78■■□□□ 1.72
ATG4D-205ENST00000586477 ADGRL1O94910 1474 aa25.76■■□□□ 1.71
ATG4D-205ENST00000586477 TROQ12816 1431 aaPredicted RBP25.74■■□□□ 1.71
ATG4D-205ENST00000586477 RAPGEF3O95398 923 aa25.74■■□□□ 1.71
ATG4D-205ENST00000586477 FANCAO15360 1455 aa25.73■■□□□ 1.71
ATG4D-205ENST00000586477 AKNAQ7Z591 1439 aa25.72■■□□□ 1.71
ATG4D-205ENST00000586477 FYCO1Q9BQS8 1478 aa25.72■■□□□ 1.71
ATG4D-205ENST00000586477 RICTORQ6R327 1708 aa25.71■■□□□ 1.71
ATG4D-205ENST00000586477 CFAP74Q9C0B2 1584 aa25.71■■□□□ 1.71
ATG4D-205ENST00000586477 PLCH2O75038 1416 aa25.71■■□□□ 1.71
ATG4D-205ENST00000586477 CEP162Q5TB80 1403 aa25.7■■□□□ 1.7
ATG4D-205ENST00000586477 MYO5CQ9NQX4 1742 aa25.69■■□□□ 1.7
ATG4D-205ENST00000586477 CCDC18Q5T9S5 1454 aa25.69■■□□□ 1.7
ATG4D-205ENST00000586477 CDK11AQ9UQ88 783 aaPredicted RBP25.68■■□□□ 1.7
ATG4D-205ENST00000586477 DENND4BO75064 1496 aaPredicted RBP25.66■■□□□ 1.7
ATG4D-205ENST00000586477 CDC42BPBQ9Y5S2 1711 aa25.6■■□□□ 1.69
ATG4D-205ENST00000586477 ZMYM4Q5VZL5 1548 aa25.59■■□□□ 1.69
ATG4D-205ENST00000586477 ARHGEF40Q8TER5 1519 aa25.58■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms