RNA–Protein interactions for RNA: ENST00000586127.6

GFAP-208, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-208ENST00000586127 VPS8Q8N3P4 1428 aa27.42■■□□□ 1.98
GFAP-208ENST00000586127 GRIN2AQ12879 1464 aa27.42■■□□□ 1.98
GFAP-208ENST00000586127 SYNJ2O15056 1496 aa27.4■■□□□ 1.98
GFAP-208ENST00000586127 EFCAB5A4FU69 1503 aa27.34■■□□□ 1.97
GFAP-208ENST00000586127 IQGAP2Q13576 1575 aa27.33■■□□□ 1.97
GFAP-208ENST00000586127 SAMD9Q5K651 1589 aa27.32■■□□□ 1.96
GFAP-208ENST00000586127 CEP170Q5SW79 1584 aa27.31■■□□□ 1.96
GFAP-208ENST00000586127 CHD1O14646 1710 aa27.28■■□□□ 1.96
GFAP-208ENST00000586127 PPARGC1BQ86YN6 1023 aaKnown RBP27.27■■□□□ 1.96
GFAP-208ENST00000586127 CHMP7Q8WUX9 453 aaPredicted RBP27.26■■□□□ 1.95
GFAP-208ENST00000586127 FHOD3Q2V2M9 1422 aa27.24■■□□□ 1.95
GFAP-208ENST00000586127 KIAA0586Q9BVV6 1533 aa27.23■■□□□ 1.95
GFAP-208ENST00000586127 FBLN2P98095 1184 aa27.22■■□□□ 1.95
GFAP-208ENST00000586127 NUP160Q12769 1436 aa27.21■■□□□ 1.95
GFAP-208ENST00000586127 P3H3Q8IVL6 736 aa27.21■■□□□ 1.95
GFAP-208ENST00000586127 UGGT2Q9NYU1 1516 aa27.18■■□□□ 1.94
GFAP-208ENST00000586127 PCF11O94913 1555 aaKnown RBP27.16■■□□□ 1.94
GFAP-208ENST00000586127 KIAA0556O60303 1618 aa27.09■■□□□ 1.93
GFAP-208ENST00000586127 TTBK1Q5TCY1 1321 aaPredicted RBP27.08■■□□□ 1.93
GFAP-208ENST00000586127 PCGF6Q9BYE7 350 aa27.08■■□□□ 1.92
GFAP-208ENST00000586127 DISP1Q96F81 1524 aa27.07■■□□□ 1.92
GFAP-208ENST00000586127 TRIM26Q12899 539 aaPredicted RBP27.07■■□□□ 1.92
GFAP-208ENST00000586127 FMN1Q68DA7 1419 aa27.03■■□□□ 1.92
GFAP-208ENST00000586127 FYCO1Q9BQS8 1478 aa27.02■■□□□ 1.92
GFAP-208ENST00000586127 CFAP43Q8NDM7 1665 aa27.01■■□□□ 1.91
GFAP-208ENST00000586127 CASKIN1Q8WXD9 1431 aa27■■□□□ 1.91
GFAP-208ENST00000586127 TIAM1Q13009 1591 aa27■■□□□ 1.91
GFAP-208ENST00000586127 LRRIQ1Q96JM4 1722 aa26.99■■□□□ 1.91
GFAP-208ENST00000586127 APLP2Q06481 763 aa26.99■■□□□ 1.91
GFAP-208ENST00000586127 MAP3K1Q13233 1512 aa26.95■■□□□ 1.9
GFAP-208ENST00000586127 SHROOM2Q13796 1616 aa26.92■■□□□ 1.9
GFAP-208ENST00000586127 KANK4Q5T7N3 995 aaPredicted RBP26.92■■□□□ 1.9
GFAP-208ENST00000586127 JPH4Q96JJ6 628 aa26.91■■□□□ 1.9
GFAP-208ENST00000586127 CLASP1Q7Z460 1538 aa26.89■■□□□ 1.9
GFAP-208ENST00000586127 ATP1B4Q9UN42 357 aaPredicted RBP26.85■■□□□ 1.89
GFAP-208ENST00000586127 HECW1Q76N89 1606 aa26.85■■□□□ 1.89
GFAP-208ENST00000586127 CARMIL2Q6F5E8 1435 aa26.84■■□□□ 1.89
GFAP-208ENST00000586127 LRRC9Q6ZRR7 1453 aa26.82■■□□□ 1.88
GFAP-208ENST00000586127 PRG4Q92954 1404 aaPredicted RBP26.81■■□□□ 1.88
GFAP-208ENST00000586127 RAPGEF6Q8TEU7 1601 aa26.8■■□□□ 1.88
GFAP-208ENST00000586127 ERCC6L2Q5T890 1561 aa26.77■■□□□ 1.88
GFAP-208ENST00000586127 EPRSP07814 1512 aaKnown RBP26.73■■□□□ 1.87
GFAP-208ENST00000586127 CCDC18Q5T9S5 1454 aa26.73■■□□□ 1.87
GFAP-208ENST00000586127 CDK13Q14004 1512 aaKnown RBP26.72■■□□□ 1.87
GFAP-208ENST00000586127 PLB1Q6P1J6 1458 aa26.72■■□□□ 1.87
GFAP-208ENST00000586127 NUP153P49790 1475 aaKnown RBP26.71■■□□□ 1.87
GFAP-208ENST00000586127 MAGI3Q5TCQ9 1506 aa26.7■■□□□ 1.86
GFAP-208ENST00000586127 ABCA8O94911 1581 aa26.68■■□□□ 1.86
GFAP-208ENST00000586127 EHBP1L1Q8N3D4 1523 aa26.63■■□□□ 1.85
GFAP-208ENST00000586127 ARID3CA6NKF2 412 aa26.62■■□□□ 1.85
GFAP-208ENST00000586127 MTUS2Q5JR59 1369 aa26.6■■□□□ 1.85
GFAP-208ENST00000586127 PTPRGP23470 1445 aa26.6■■□□□ 1.85
GFAP-208ENST00000586127 PHLDB1Q86UU1 1377 aa26.59■■□□□ 1.85
GFAP-208ENST00000586127 RRBP1Q9P2E9 1410 aaKnown RBP26.58■■□□□ 1.85
GFAP-208ENST00000586127 SUPT6HQ7KZ85 1726 aaKnown RBP26.57■■□□□ 1.84
GFAP-208ENST00000586127 NCOA2Q15596 1464 aa26.52■■□□□ 1.84
GFAP-208ENST00000586127 OSCARQ8IYS5 282 aa26.51■■□□□ 1.83
GFAP-208ENST00000586127 ARHGEF11O15085 1522 aa26.5■■□□□ 1.83
GFAP-208ENST00000586127 CCNB3Q8WWL7 1395 aa26.48■■□□□ 1.83
GFAP-208ENST00000586127 UACAQ9BZF9 1416 aa26.47■■□□□ 1.83
GFAP-208ENST00000586127 ATP10BO94823 1461 aa26.46■■□□□ 1.83
GFAP-208ENST00000586127 ABCC2Q92887 1545 aa26.45■■□□□ 1.82
GFAP-208ENST00000586127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.41■■□□□ 1.82
GFAP-208ENST00000586127 HNRNPUL2Q1KMD3 747 aaKnown RBP26.41■■□□□ 1.82
GFAP-208ENST00000586127 ADCY10Q96PN6 1610 aa26.4■■□□□ 1.82
GFAP-208ENST00000586127 KIF14Q15058 1648 aa26.4■■□□□ 1.82
GFAP-208ENST00000586127 TROQ12816 1431 aaPredicted RBP26.38■■□□□ 1.81
GFAP-208ENST00000586127 MYOM3Q5VTT5 1437 aa26.38■■□□□ 1.81
GFAP-208ENST00000586127 FGD6Q6ZV73 1430 aa26.38■■□□□ 1.81
GFAP-208ENST00000586127 UHRF1BP1LA0JNW5 1464 aa26.35■■□□□ 1.81
GFAP-208ENST00000586127 CDK11AQ9UQ88 783 aaPredicted RBP26.34■■□□□ 1.81
GFAP-208ENST00000586127 ZCCHC11Q5TAX3 1644 aaKnown RBP26.33■■□□□ 1.81
GFAP-208ENST00000586127 PTPN23Q9H3S7 1636 aa26.31■■□□□ 1.8
GFAP-208ENST00000586127 FAM50AQ14320 339 aaKnown RBP26.28■■□□□ 1.8
GFAP-208ENST00000586127 KDM5BQ9UGL1 1544 aa26.26■■□□□ 1.79
GFAP-208ENST00000586127 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.25■■□□□ 1.79
GFAP-208ENST00000586127 ITSN2Q9NZM3 1697 aa26.24■■□□□ 1.79
GFAP-208ENST00000586127 ITGAEP38570 1179 aa26.23■■□□□ 1.79
GFAP-208ENST00000586127 TCOF1Q13428 1488 aaKnown RBP26.23■■□□□ 1.79
GFAP-208ENST00000586127 PLEKHD1A6NEE1 506 aa26.22■■□□□ 1.79
GFAP-208ENST00000586127 CDC42BPAQ5VT25 1732 aa26.22■■□□□ 1.79
GFAP-208ENST00000586127 ABCC10Q5T3U5 1492 aa26.21■■□□□ 1.79
GFAP-208ENST00000586127 HRCP23327 699 aa26.21■■□□□ 1.79
GFAP-208ENST00000586127 MIA2Q96PC5 1412 aa26.2■■□□□ 1.78
GFAP-208ENST00000586127 GPATCH8Q9UKJ3 1502 aaKnown RBP26.18■■□□□ 1.78
GFAP-208ENST00000586127 TTC37Q6PGP7 1564 aa26.14■■□□□ 1.78
GFAP-208ENST00000586127 RIMBP3CA6NJZ7 1639 aa26.12■■□□□ 1.77
GFAP-208ENST00000586127 RIMBP3BA6NNM3 1639 aa26.12■■□□□ 1.77
GFAP-208ENST00000586127 RIMBP3Q9UFD9 1639 aa26.12■■□□□ 1.77
GFAP-208ENST00000586127 PTPRKQ15262 1439 aa26.12■■□□□ 1.77
GFAP-208ENST00000586127 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.11■■□□□ 1.77
GFAP-208ENST00000586127 PREX2Q70Z35 1606 aa26.09■■□□□ 1.77
GFAP-208ENST00000586127 CDC42BPBQ9Y5S2 1711 aa26.08■■□□□ 1.77
GFAP-208ENST00000586127 CAMSAP2Q08AD1 1489 aa26.08■■□□□ 1.76
GFAP-208ENST00000586127 ZNF644Q9H582 1327 aaPredicted RBP26.06■■□□□ 1.76
GFAP-208ENST00000586127 DNMT1P26358 1616 aaKnown RBP26.06■■□□□ 1.76
GFAP-208ENST00000586127 MYO5CQ9NQX4 1742 aa26.04■■□□□ 1.76
GFAP-208ENST00000586127 CCER1Q8TC90 406 aaPredicted RBP26.03■■□□□ 1.76
GFAP-208ENST00000586127 CFDP1Q9UEE9 299 aaPredicted RBP26.03■■□□□ 1.76
GFAP-208ENST00000586127 WDR7Q9Y4E6 1490 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms