RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 JPH4Q96JJ6 628 aa29.51■■■□□ 2.31
MBD3-204ENST00000585967 IGF1RP08069 1367 aa29.48■■■□□ 2.31
MBD3-204ENST00000585967 KIAA0586Q9BVV6 1533 aa29.47■■■□□ 2.31
MBD3-204ENST00000585967 KIF13AQ9H1H9 1805 aa29.37■■■□□ 2.29
MBD3-204ENST00000585967 CARMIL1Q5VZK9 1371 aa29.37■■■□□ 2.29
MBD3-204ENST00000585967 IQGAP2Q13576 1575 aa29.3■■■□□ 2.28
MBD3-204ENST00000585967 NPM1P06748 294 aaKnown RBP eCLIP29.3■■■□□ 2.28
MBD3-204ENST00000585967 ADCY10Q96PN6 1610 aa29.28■■■□□ 2.28
MBD3-204ENST00000585967 MAPKBP1O60336 1514 aa29.26■■■□□ 2.27
MBD3-204ENST00000585967 CARMIL2Q6F5E8 1435 aa29.26■■■□□ 2.27
MBD3-204ENST00000585967 RAPGEF2Q9Y4G8 1499 aa29.18■■■□□ 2.26
MBD3-204ENST00000585967 CTTNBP2Q8WZ74 1663 aa29.15■■■□□ 2.26
MBD3-204ENST00000585967 DIP2BQ9P265 1576 aa29.14■■■□□ 2.26
MBD3-204ENST00000585967 ABCC10Q5T3U5 1492 aa29.14■■■□□ 2.26
MBD3-204ENST00000585967 PTPRGP23470 1445 aa29.13■■■□□ 2.25
MBD3-204ENST00000585967 TNIKQ9UKE5 1360 aa29.12■■■□□ 2.25
MBD3-204ENST00000585967 UGGT2Q9NYU1 1516 aa29.05■■■□□ 2.24
MBD3-204ENST00000585967 FAM69CQ0P6D2 419 aa29.04■■■□□ 2.24
MBD3-204ENST00000585967 ABCC2Q92887 1545 aa29.02■■■□□ 2.24
MBD3-204ENST00000585967 KIAA0556O60303 1618 aa29.02■■■□□ 2.24
MBD3-204ENST00000585967 TSPOAP1O95153 1857 aa29.01■■■□□ 2.23
MBD3-204ENST00000585967 DISP1Q96F81 1524 aa29■■■□□ 2.23
MBD3-204ENST00000585967 UHRF1BP1LA0JNW5 1464 aa28.98■■■□□ 2.23
MBD3-204ENST00000585967 TTBK1Q5TCY1 1321 aaPredicted RBP28.98■■■□□ 2.23
MBD3-204ENST00000585967 UACAQ9BZF9 1416 aa28.94■■■□□ 2.22
MBD3-204ENST00000585967 AEBP2Q6ZN18 517 aaPredicted RBP28.93■■■□□ 2.22
MBD3-204ENST00000585967 GOLGA3Q08378 1498 aa28.92■■■□□ 2.22
MBD3-204ENST00000585967 PLB1Q6P1J6 1458 aa28.92■■■□□ 2.22
MBD3-204ENST00000585967 KDM6BO15054 1643 aa28.91■■■□□ 2.22
MBD3-204ENST00000585967 ZCCHC11Q5TAX3 1644 aaKnown RBP28.86■■■□□ 2.21
MBD3-204ENST00000585967 ASXL2Q76L83 1435 aa28.86■■■□□ 2.21
MBD3-204ENST00000585967 PRXQ9BXM0 1461 aa28.85■■■□□ 2.21
MBD3-204ENST00000585967 GLI2P10070 1586 aa28.85■■■□□ 2.21
MBD3-204ENST00000585967 KDM5BQ9UGL1 1544 aa28.83■■■□□ 2.21
MBD3-204ENST00000585967 FAM9AQ8IZU1 332 aaPredicted RBP28.76■■■□□ 2.19
MBD3-204ENST00000585967 EEA1Q15075 1411 aa28.73■■■□□ 2.19
MBD3-204ENST00000585967 PPRC1Q5VV67 1664 aaKnown RBP28.73■■■□□ 2.19
MBD3-204ENST00000585967 MAP3K4Q9Y6R4 1608 aa28.72■■■□□ 2.19
MBD3-204ENST00000585967 EPRSP07814 1512 aaKnown RBP28.69■■■□□ 2.18
MBD3-204ENST00000585967 ABCA8O94911 1581 aa28.68■■■□□ 2.18
MBD3-204ENST00000585967 TEX14Q8IWB6 1497 aa28.68■■■□□ 2.18
MBD3-204ENST00000585967 WDR7Q9Y4E6 1490 aa28.66■■■□□ 2.18
MBD3-204ENST00000585967 CSRNP3Q8WYN3 585 aa28.63■■■□□ 2.17
MBD3-204ENST00000585967 CFAP43Q8NDM7 1665 aa28.62■■■□□ 2.17
MBD3-204ENST00000585967 SAMD9Q5K651 1589 aa28.59■■■□□ 2.17
MBD3-204ENST00000585967 KIF21BO75037 1637 aa28.5■■■□□ 2.15
MBD3-204ENST00000585967 RAPGEF6Q8TEU7 1601 aa28.49■■■□□ 2.15
MBD3-204ENST00000585967 MAGI3Q5TCQ9 1506 aa28.43■■■□□ 2.14
MBD3-204ENST00000585967 CD109Q6YHK3 1445 aa28.43■■■□□ 2.14
MBD3-204ENST00000585967 P3H3Q8IVL6 736 aa28.41■■■□□ 2.14
MBD3-204ENST00000585967 EFCAB5A4FU69 1503 aa28.41■■■□□ 2.14
MBD3-204ENST00000585967 KCNH8Q96L42 1107 aa28.38■■■□□ 2.13
MBD3-204ENST00000585967 ATP10BO94823 1461 aa28.35■■■□□ 2.13
MBD3-204ENST00000585967 ABCA9Q8IUA7 1624 aa28.34■■■□□ 2.13
MBD3-204ENST00000585967 COL17A1Q9UMD9 1497 aaPredicted RBP28.32■■■□□ 2.12
MBD3-204ENST00000585967 FHOD3Q2V2M9 1422 aa28.27■■■□□ 2.12
MBD3-204ENST00000585967 ARID3CA6NKF2 412 aa28.27■■■□□ 2.12
MBD3-204ENST00000585967 KDM4FA0A1W2PPD8 638 aa28.26■■■□□ 2.11
MBD3-204ENST00000585967 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.26■■■□□ 2.11
MBD3-204ENST00000585967 HNRNPUL2Q1KMD3 747 aaKnown RBP28.26■■■□□ 2.11
MBD3-204ENST00000585967 ADGRL1O94910 1474 aa28.26■■■□□ 2.11
MBD3-204ENST00000585967 RANGAP1P46060 587 aaPredicted RBP28.25■■■□□ 2.11
MBD3-204ENST00000585967 NUP153P49790 1475 aaKnown RBP28.25■■■□□ 2.11
MBD3-204ENST00000585967 PHLDB1Q86UU1 1377 aa28.23■■■□□ 2.11
MBD3-204ENST00000585967 ARAP3Q8WWN8 1544 aa28.21■■■□□ 2.11
MBD3-204ENST00000585967 CFAP74Q9C0B2 1584 aa28.16■■■□□ 2.1
MBD3-204ENST00000585967 NEO1Q92859 1461 aa28.16■■■□□ 2.1
MBD3-204ENST00000585967 UBTFP17480 764 aaKnown RBP28.14■■■□□ 2.1
MBD3-204ENST00000585967 CHIC1Q5VXU3 224 aa28.13■■■□□ 2.09
MBD3-204ENST00000585967 HECW1Q76N89 1606 aa28.11■■■□□ 2.09
MBD3-204ENST00000585967 FMN1Q68DA7 1419 aa28.1■■■□□ 2.09
MBD3-204ENST00000585967 PLEKHD1A6NEE1 506 aa28.1■■■□□ 2.09
MBD3-204ENST00000585967 TTC37Q6PGP7 1564 aa28■■■□□ 2.07
MBD3-204ENST00000585967 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28■■■□□ 2.071e-6■□□□□ 10.7
MBD3-204ENST00000585967 CDK13Q14004 1512 aaKnown RBP27.99■■■□□ 2.07
MBD3-204ENST00000585967 ARHGAP35Q9NRY4 1499 aa27.98■■■□□ 2.07
MBD3-204ENST00000585967 EHMT2Q96KQ7 1210 aa27.98■■■□□ 2.07
MBD3-204ENST00000585967 RICTORQ6R327 1708 aa27.97■■■□□ 2.07
MBD3-204ENST00000585967 MYO5CQ9NQX4 1742 aa27.97■■■□□ 2.07
MBD3-204ENST00000585967 FANCAO15360 1455 aa27.96■■■□□ 2.07
MBD3-204ENST00000585967 FRMPD1Q5SYB0 1578 aa27.96■■■□□ 2.07
MBD3-204ENST00000585967 CDK11AQ9UQ88 783 aaPredicted RBP27.93■■■□□ 2.06
MBD3-204ENST00000585967 DENND4BO75064 1496 aaPredicted RBP27.92■■■□□ 2.06
MBD3-204ENST00000585967 ARHGEF40Q8TER5 1519 aa27.92■■■□□ 2.06
MBD3-204ENST00000585967 KIF14Q15058 1648 aa27.91■■■□□ 2.06
MBD3-204ENST00000585967 ATP1B4Q9UN42 357 aaPredicted RBP27.9■■■□□ 2.06
MBD3-204ENST00000585967 AKNAQ7Z591 1439 aa27.9■■■□□ 2.06
MBD3-204ENST00000585967 RAPGEF3O95398 923 aa27.89■■■□□ 2.06
MBD3-204ENST00000585967 BCORL1Q5H9F3 1711 aa27.86■■■□□ 2.05
MBD3-204ENST00000585967 ZMYM4Q5VZL5 1548 aa27.86■■■□□ 2.05
MBD3-204ENST00000585967 HECW2Q9P2P5 1572 aa27.86■■■□□ 2.05
MBD3-204ENST00000585967 CLIP1P30622 1438 aa27.85■■■□□ 2.05
MBD3-204ENST00000585967 ADAMTSL3P82987 1691 aa27.85■■■□□ 2.05
MBD3-204ENST00000585967 LRRIQ1Q96JM4 1722 aa27.85■■■□□ 2.05
MBD3-204ENST00000585967 PLCH2O75038 1416 aa27.81■■■□□ 2.04
MBD3-204ENST00000585967 CCDC18Q5T9S5 1454 aa27.81■■■□□ 2.04
MBD3-204ENST00000585967 PCF11O94913 1555 aaKnown RBP27.79■■■□□ 2.04
MBD3-204ENST00000585967 ZFYVE16Q7Z3T8 1539 aa27.79■■■□□ 2.04
MBD3-204ENST00000585967 MAGI2Q86UL8 1455 aa27.78■■■□□ 2.04
MBD3-204ENST00000585967 TROQ12816 1431 aaPredicted RBP27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms