RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 PRXQ9BXM0 1461 aa21.08■□□□□ 0.96
RETREG3-203ENST00000585894 EEA1Q15075 1411 aa21.08■□□□□ 0.96
RETREG3-203ENST00000585894 SHROOM2Q13796 1616 aa21.05■□□□□ 0.96
RETREG3-203ENST00000585894 ERCC6L2Q5T890 1561 aa21.05■□□□□ 0.96
RETREG3-203ENST00000585894 KIAA0586Q9BVV6 1533 aa21.02■□□□□ 0.96
RETREG3-203ENST00000585894 CTTNBP2Q8WZ74 1663 aa20.99■□□□□ 0.95
RETREG3-203ENST00000585894 ARAP1Q96P48 1450 aa20.98■□□□□ 0.95
RETREG3-203ENST00000585894 IQGAP2Q13576 1575 aa20.97■□□□□ 0.95
RETREG3-203ENST00000585894 JPH4Q96JJ6 628 aa20.97■□□□□ 0.95
RETREG3-203ENST00000585894 PRG4Q92954 1404 aaPredicted RBP20.96■□□□□ 0.95
RETREG3-203ENST00000585894 EHMT2Q96KQ7 1210 aa20.95■□□□□ 0.94
RETREG3-203ENST00000585894 KIF21BO75037 1637 aa20.94■□□□□ 0.94
RETREG3-203ENST00000585894 CYB5RLQ6IPT4 315 aa20.92■□□□□ 0.94
RETREG3-203ENST00000585894 UGGT2Q9NYU1 1516 aa20.83■□□□□ 0.92
RETREG3-203ENST00000585894 DISP1Q96F81 1524 aa20.82■□□□□ 0.92
RETREG3-203ENST00000585894 GOLGA3Q08378 1498 aa20.8■□□□□ 0.92
RETREG3-203ENST00000585894 TTBK1Q5TCY1 1321 aaPredicted RBP20.79■□□□□ 0.92
RETREG3-203ENST00000585894 KIAA0556O60303 1618 aa20.78■□□□□ 0.92
RETREG3-203ENST00000585894 RANGAP1P46060 587 aaPredicted RBP20.77■□□□□ 0.92
RETREG3-203ENST00000585894 CARMIL2Q6F5E8 1435 aa20.77■□□□□ 0.91
RETREG3-203ENST00000585894 UBTFP17480 764 aaKnown RBP20.75■□□□□ 0.91
RETREG3-203ENST00000585894 TNIKQ9UKE5 1360 aa20.71■□□□□ 0.91
RETREG3-203ENST00000585894 P3H3Q8IVL6 736 aa20.7■□□□□ 0.9
RETREG3-203ENST00000585894 PTPRGP23470 1445 aa20.69■□□□□ 0.9
RETREG3-203ENST00000585894 SAMD9Q5K651 1589 aa20.68■□□□□ 0.9
RETREG3-203ENST00000585894 ADCY10Q96PN6 1610 aa20.66■□□□□ 0.9
RETREG3-203ENST00000585894 FHOD3Q2V2M9 1422 aa20.59■□□□□ 0.89
RETREG3-203ENST00000585894 PLB1Q6P1J6 1458 aa20.57■□□□□ 0.88
RETREG3-203ENST00000585894 EFCAB5A4FU69 1503 aa20.57■□□□□ 0.88
RETREG3-203ENST00000585894 LOC105371045A0A1W2PR82 267 aa20.57■□□□□ 0.88
RETREG3-203ENST00000585894 UACAQ9BZF9 1416 aa20.57■□□□□ 0.88
RETREG3-203ENST00000585894 ARHGAP35Q9NRY4 1499 aa20.55■□□□□ 0.88
RETREG3-203ENST00000585894 ABCC2Q92887 1545 aa20.55■□□□□ 0.88
RETREG3-203ENST00000585894 ABCA8O94911 1581 aa20.53■□□□□ 0.88
RETREG3-203ENST00000585894 UHRF1BP1LA0JNW5 1464 aa20.52■□□□□ 0.87
RETREG3-203ENST00000585894 ZCCHC11Q5TAX3 1644 aaKnown RBP20.47■□□□□ 0.87
RETREG3-203ENST00000585894 NPM1P06748 294 aaKnown RBP eCLIP20.47■□□□□ 0.87
RETREG3-203ENST00000585894 RAPGEF6Q8TEU7 1601 aa20.47■□□□□ 0.87
RETREG3-203ENST00000585894 ARID3CA6NKF2 412 aa20.46■□□□□ 0.87
RETREG3-203ENST00000585894 CLIP1P30622 1438 aa20.45■□□□□ 0.86
RETREG3-203ENST00000585894 TRHP20396 242 aaPredicted RBP20.44■□□□□ 0.86
RETREG3-203ENST00000585894 KDM5BQ9UGL1 1544 aa20.44■□□□□ 0.86
RETREG3-203ENST00000585894 MAPKBP1O60336 1514 aa20.44■□□□□ 0.86
RETREG3-203ENST00000585894 CEP162Q5TB80 1403 aa20.41■□□□□ 0.86
RETREG3-203ENST00000585894 KIF13AQ9H1H9 1805 aa20.4■□□□□ 0.86
RETREG3-203ENST00000585894 NUP153P49790 1475 aaKnown RBP20.39■□□□□ 0.85
RETREG3-203ENST00000585894 ASXL2Q76L83 1435 aa20.38■□□□□ 0.85
RETREG3-203ENST00000585894 ATP10BO94823 1461 aa20.36■□□□□ 0.85
RETREG3-203ENST00000585894 FMN1Q68DA7 1419 aa20.36■□□□□ 0.85
RETREG3-203ENST00000585894 DIP2BQ9P265 1576 aa20.35■□□□□ 0.85
RETREG3-203ENST00000585894 PCF11O94913 1555 aaKnown RBP20.33■□□□□ 0.85
RETREG3-203ENST00000585894 ABCC10Q5T3U5 1492 aa20.32■□□□□ 0.84
RETREG3-203ENST00000585894 LRRIQ1Q96JM4 1722 aa20.32■□□□□ 0.84
RETREG3-203ENST00000585894 ATP1B4Q9UN42 357 aaPredicted RBP20.32■□□□□ 0.84
RETREG3-203ENST00000585894 CDK13Q14004 1512 aaKnown RBP20.31■□□□□ 0.84
RETREG3-203ENST00000585894 HECW1Q76N89 1606 aa20.3■□□□□ 0.84
RETREG3-203ENST00000585894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.29■□□□□ 0.84
RETREG3-203ENST00000585894 FAM69CQ0P6D2 419 aa20.29■□□□□ 0.84
RETREG3-203ENST00000585894 HNRNPUL2Q1KMD3 747 aaKnown RBP20.29■□□□□ 0.84
RETREG3-203ENST00000585894 WDR7Q9Y4E6 1490 aa20.29■□□□□ 0.84
RETREG3-203ENST00000585894 EPRSP07814 1512 aaKnown RBP20.26■□□□□ 0.83
RETREG3-203ENST00000585894 TSPOAP1O95153 1857 aa20.26■□□□□ 0.83
RETREG3-203ENST00000585894 CASKIN1Q8WXD9 1431 aa20.24■□□□□ 0.83
RETREG3-203ENST00000585894 KCNH8Q96L42 1107 aa20.23■□□□□ 0.83
RETREG3-203ENST00000585894 FYCO1Q9BQS8 1478 aa20.21■□□□□ 0.83
RETREG3-203ENST00000585894 GLI2P10070 1586 aa20.21■□□□□ 0.83
RETREG3-203ENST00000585894 MAP3K4Q9Y6R4 1608 aa20.17■□□□□ 0.82
RETREG3-203ENST00000585894 PPRC1Q5VV67 1664 aaKnown RBP20.16■□□□□ 0.82
RETREG3-203ENST00000585894 PLEKHD1A6NEE1 506 aa20.14■□□□□ 0.81
RETREG3-203ENST00000585894 CCDC18Q5T9S5 1454 aa20.13■□□□□ 0.81
RETREG3-203ENST00000585894 VPS8Q8N3P4 1428 aa20.12■□□□□ 0.81
RETREG3-203ENST00000585894 CFAP43Q8NDM7 1665 aa20.12■□□□□ 0.81
RETREG3-203ENST00000585894 MAGI3Q5TCQ9 1506 aa20.11■□□□□ 0.81
RETREG3-203ENST00000585894 ABCA9Q8IUA7 1624 aa20.11■□□□□ 0.81
RETREG3-203ENST00000585894 KIF14Q15058 1648 aa20.09■□□□□ 0.81
RETREG3-203ENST00000585894 TTC37Q6PGP7 1564 aa20.09■□□□□ 0.81
RETREG3-203ENST00000585894 CD109Q6YHK3 1445 aa20.08■□□□□ 0.8
RETREG3-203ENST00000585894 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.07■□□□□ 0.86e-6■■■■■ 38.2
RETREG3-203ENST00000585894 TROQ12816 1431 aaPredicted RBP20.06■□□□□ 0.8
RETREG3-203ENST00000585894 CDK11AQ9UQ88 783 aaPredicted RBP20.05■□□□□ 0.8
RETREG3-203ENST00000585894 TIAM1Q13009 1591 aa20■□□□□ 0.79
RETREG3-203ENST00000585894 TEX14Q8IWB6 1497 aa19.99■□□□□ 0.79
RETREG3-203ENST00000585894 KDM6BO15054 1643 aa19.98■□□□□ 0.79
RETREG3-203ENST00000585894 MYO5CQ9NQX4 1742 aa19.97■□□□□ 0.79
RETREG3-203ENST00000585894 MTUS2Q5JR59 1369 aa19.96■□□□□ 0.79
RETREG3-203ENST00000585894 EHBP1L1Q8N3D4 1523 aa19.94■□□□□ 0.78
RETREG3-203ENST00000585894 COL17A1Q9UMD9 1497 aaPredicted RBP19.94■□□□□ 0.78
RETREG3-203ENST00000585894 CDC42BPAQ5VT25 1732 aa19.92■□□□□ 0.78
RETREG3-203ENST00000585894 CDC42BPBQ9Y5S2 1711 aa19.91■□□□□ 0.78
RETREG3-203ENST00000585894 KANK4Q5T7N3 995 aaPredicted RBP19.9■□□□□ 0.78
RETREG3-203ENST00000585894 FANCAO15360 1455 aa19.9■□□□□ 0.78
RETREG3-203ENST00000585894 PLCH2O75038 1416 aa19.89■□□□□ 0.78
RETREG3-203ENST00000585894 PREX2Q70Z35 1606 aa19.89■□□□□ 0.77
RETREG3-203ENST00000585894 LRRC9Q6ZRR7 1453 aa19.89■□□□□ 0.77
RETREG3-203ENST00000585894 MAP3K1Q13233 1512 aa19.88■□□□□ 0.77
RETREG3-203ENST00000585894 SUPT6HQ7KZ85 1726 aaKnown RBP19.87■□□□□ 0.77
RETREG3-203ENST00000585894 ARHGAP5Q13017 1502 aa19.87■□□□□ 0.77
RETREG3-203ENST00000585894 NEO1Q92859 1461 aa19.87■□□□□ 0.77
RETREG3-203ENST00000585894 CFAP74Q9C0B2 1584 aa19.87■□□□□ 0.77
RETREG3-203ENST00000585894 AKNAQ7Z591 1439 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms