RNA–Protein interactions for RNA: ENST00000585486.1

SPC24-202, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-202ENST00000585486 CEP162Q5TB80 1403 aa21.63■■□□□ 1.05
SPC24-202ENST00000585486 KIAA0586Q9BVV6 1533 aa21.62■■□□□ 1.05
SPC24-202ENST00000585486 FBLN2P98095 1184 aa21.62■■□□□ 1.05
SPC24-202ENST00000585486 CTTNBP2Q8WZ74 1663 aa21.61■■□□□ 1.05
SPC24-202ENST00000585486 CLIP1P30622 1438 aa21.55■■□□□ 1.04
SPC24-202ENST00000585486 IQGAP2Q13576 1575 aa21.54■■□□□ 1.04
SPC24-202ENST00000585486 ARHGAP35Q9NRY4 1499 aa21.53■■□□□ 1.04
SPC24-202ENST00000585486 UGGT2Q9NYU1 1516 aa21.52■■□□□ 1.04
SPC24-202ENST00000585486 CLASP1Q7Z460 1538 aa21.51■■□□□ 1.03
SPC24-202ENST00000585486 SAMD9Q5K651 1589 aa21.48■■□□□ 1.03
SPC24-202ENST00000585486 ARAP1Q96P48 1450 aa21.46■■□□□ 1.03
SPC24-202ENST00000585486 EFCAB5A4FU69 1503 aa21.45■■□□□ 1.02
SPC24-202ENST00000585486 DISP1Q96F81 1524 aa21.45■■□□□ 1.02
SPC24-202ENST00000585486 RANGAP1P46060 587 aaPredicted RBP21.44■■□□□ 1.02
SPC24-202ENST00000585486 JPH4Q96JJ6 628 aa21.44■■□□□ 1.02
SPC24-202ENST00000585486 SHROOM2Q13796 1616 aa21.44■■□□□ 1.02
SPC24-202ENST00000585486 OSCARQ8IYS5 282 aa21.4■■□□□ 1.02
SPC24-202ENST00000585486 FHOD3Q2V2M9 1422 aa21.36■■□□□ 1.01
SPC24-202ENST00000585486 KIAA0556O60303 1618 aa21.36■■□□□ 1.01
SPC24-202ENST00000585486 P3H3Q8IVL6 736 aa21.34■■□□□ 1.01
SPC24-202ENST00000585486 VPS8Q8N3P4 1428 aa21.33■■□□□ 1.01
SPC24-202ENST00000585486 PRG4Q92954 1404 aaPredicted RBP21.33■■□□□ 1.01
SPC24-202ENST00000585486 ERCC6L2Q5T890 1561 aa21.31■■□□□ 1
SPC24-202ENST00000585486 CARMIL2Q6F5E8 1435 aa21.27■■□□□ 1
SPC24-202ENST00000585486 FMN1Q68DA7 1419 aa21.22■□□□□ 0.99
SPC24-202ENST00000585486 CASKIN1Q8WXD9 1431 aa21.2■□□□□ 0.98
SPC24-202ENST00000585486 PCF11O94913 1555 aaKnown RBP21.17■□□□□ 0.98
SPC24-202ENST00000585486 FYCO1Q9BQS8 1478 aa21.14■□□□□ 0.98
SPC24-202ENST00000585486 PTPRGP23470 1445 aa21.14■□□□□ 0.98
SPC24-202ENST00000585486 ABCA8O94911 1581 aa21.13■□□□□ 0.97
SPC24-202ENST00000585486 PLB1Q6P1J6 1458 aa21.12■□□□□ 0.97
SPC24-202ENST00000585486 MAP3K1Q13233 1512 aa21.09■□□□□ 0.97
SPC24-202ENST00000585486 NUP153P49790 1475 aaKnown RBP21.08■□□□□ 0.97
SPC24-202ENST00000585486 ARHGEF11O15085 1522 aa21.08■□□□□ 0.96
SPC24-202ENST00000585486 RAPGEF6Q8TEU7 1601 aa21.07■□□□□ 0.96
SPC24-202ENST00000585486 LRRIQ1Q96JM4 1722 aa21.07■□□□□ 0.96
SPC24-202ENST00000585486 TTBK1Q5TCY1 1321 aaPredicted RBP21.04■□□□□ 0.96
SPC24-202ENST00000585486 UACAQ9BZF9 1416 aa21.04■□□□□ 0.96
SPC24-202ENST00000585486 HECW1Q76N89 1606 aa21.03■□□□□ 0.96
SPC24-202ENST00000585486 EPRSP07814 1512 aaKnown RBP21.03■□□□□ 0.96
SPC24-202ENST00000585486 TIAM1Q13009 1591 aa21.02■□□□□ 0.96
SPC24-202ENST00000585486 UHRF1BP1LA0JNW5 1464 aa21.02■□□□□ 0.96
SPC24-202ENST00000585486 KANK4Q5T7N3 995 aaPredicted RBP21■□□□□ 0.95
SPC24-202ENST00000585486 RIMBP3CA6NJZ7 1639 aa21■□□□□ 0.95
SPC24-202ENST00000585486 RIMBP3BA6NNM3 1639 aa21■□□□□ 0.95
SPC24-202ENST00000585486 RIMBP3Q9UFD9 1639 aa21■□□□□ 0.95
SPC24-202ENST00000585486 ABCC2Q92887 1545 aa20.99■□□□□ 0.95
SPC24-202ENST00000585486 CFAP43Q8NDM7 1665 aa20.99■□□□□ 0.95
SPC24-202ENST00000585486 ATP10BO94823 1461 aa20.97■□□□□ 0.95
SPC24-202ENST00000585486 CCDC18Q5T9S5 1454 aa20.97■□□□□ 0.95
SPC24-202ENST00000585486 CDK13Q14004 1512 aaKnown RBP20.97■□□□□ 0.95
SPC24-202ENST00000585486 ATP1B4Q9UN42 357 aaPredicted RBP20.95■□□□□ 0.94
SPC24-202ENST00000585486 LRRC9Q6ZRR7 1453 aa20.94■□□□□ 0.94
SPC24-202ENST00000585486 MAGI3Q5TCQ9 1506 aa20.94■□□□□ 0.94
SPC24-202ENST00000585486 PPARGC1BQ86YN6 1023 aaKnown RBP20.94■□□□□ 0.94
SPC24-202ENST00000585486 ADCY10Q96PN6 1610 aa20.93■□□□□ 0.94
SPC24-202ENST00000585486 KDM5BQ9UGL1 1544 aa20.92■□□□□ 0.94
SPC24-202ENST00000585486 APLP2Q06481 763 aa20.91■□□□□ 0.94
SPC24-202ENST00000585486 ARID3CA6NKF2 412 aa20.89■□□□□ 0.93
SPC24-202ENST00000585486 ZCCHC11Q5TAX3 1644 aaKnown RBP20.82■□□□□ 0.92
SPC24-202ENST00000585486 CYB5RLQ6IPT4 315 aa20.82■□□□□ 0.92
SPC24-202ENST00000585486 EHBP1L1Q8N3D4 1523 aa20.82■□□□□ 0.92
SPC24-202ENST00000585486 TROQ12816 1431 aaPredicted RBP20.8■□□□□ 0.92
SPC24-202ENST00000585486 MTUS2Q5JR59 1369 aa20.8■□□□□ 0.92
SPC24-202ENST00000585486 DNAJC5Q9H3Z4 198 aa20.79■□□□□ 0.92
SPC24-202ENST00000585486 CDK11AQ9UQ88 783 aaPredicted RBP20.76■□□□□ 0.91
SPC24-202ENST00000585486 PHLDB1Q86UU1 1377 aa20.75■□□□□ 0.91
SPC24-202ENST00000585486 NCOA2Q15596 1464 aa20.75■□□□□ 0.91
SPC24-202ENST00000585486 PLEKHD1A6NEE1 506 aa20.74■□□□□ 0.91
SPC24-202ENST00000585486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.74■□□□□ 0.91
SPC24-202ENST00000585486 HNRNPUL2Q1KMD3 747 aaKnown RBP20.74■□□□□ 0.91
SPC24-202ENST00000585486 ABCC10Q5T3U5 1492 aa20.72■□□□□ 0.91
SPC24-202ENST00000585486 KIF14Q15058 1648 aa20.71■□□□□ 0.91
SPC24-202ENST00000585486 SUPT6HQ7KZ85 1726 aaKnown RBP20.7■□□□□ 0.9
SPC24-202ENST00000585486 ASXL2Q76L83 1435 aa20.69■□□□□ 0.9
SPC24-202ENST00000585486 RRBP1Q9P2E9 1410 aaKnown RBP20.68■□□□□ 0.9
SPC24-202ENST00000585486 WDR7Q9Y4E6 1490 aa20.68■□□□□ 0.9
SPC24-202ENST00000585486 TRIM26Q12899 539 aaPredicted RBP20.66■□□□□ 0.9
SPC24-202ENST00000585486 MAPKBP1O60336 1514 aa20.65■□□□□ 0.9
SPC24-202ENST00000585486 MYOM3Q5VTT5 1437 aa20.63■□□□□ 0.89
SPC24-202ENST00000585486 NPM1P06748 294 aaKnown RBP eCLIP20.63■□□□□ 0.89
SPC24-202ENST00000585486 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.63■□□□□ 0.89
SPC24-202ENST00000585486 GPATCH8Q9UKJ3 1502 aaKnown RBP20.63■□□□□ 0.89
SPC24-202ENST00000585486 FGD6Q6ZV73 1430 aa20.6■□□□□ 0.89
SPC24-202ENST00000585486 TTC37Q6PGP7 1564 aa20.59■□□□□ 0.89
SPC24-202ENST00000585486 KCNH8Q96L42 1107 aa20.57■□□□□ 0.88
SPC24-202ENST00000585486 MIA2Q96PC5 1412 aa20.57■□□□□ 0.88
SPC24-202ENST00000585486 CCNB3Q8WWL7 1395 aa20.57■□□□□ 0.88
SPC24-202ENST00000585486 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.56■□□□□ 0.88
SPC24-202ENST00000585486 TCOF1Q13428 1488 aaKnown RBP20.56■□□□□ 0.88
SPC24-202ENST00000585486 ABCA9Q8IUA7 1624 aa20.55■□□□□ 0.88
SPC24-202ENST00000585486 CDC42BPAQ5VT25 1732 aa20.54■□□□□ 0.88
SPC24-202ENST00000585486 PLCH2O75038 1416 aa20.52■□□□□ 0.87
SPC24-202ENST00000585486 PREX2Q70Z35 1606 aa20.5■□□□□ 0.87
SPC24-202ENST00000585486 GLI2P10070 1586 aa20.5■□□□□ 0.87
SPC24-202ENST00000585486 PTPN23Q9H3S7 1636 aa20.49■□□□□ 0.87
SPC24-202ENST00000585486 PCGF6Q9BYE7 350 aa20.49■□□□□ 0.87
SPC24-202ENST00000585486 CDC42BPBQ9Y5S2 1711 aa20.49■□□□□ 0.87
SPC24-202ENST00000585486 ZNF644Q9H582 1327 aaPredicted RBP20.49■□□□□ 0.87
SPC24-202ENST00000585486 ITSN2Q9NZM3 1697 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms