RNA–Protein interactions for RNA: ENST00000585359.1

GADD45B-202, Transcript of growth arrest and DNA damage inducible beta, humanhuman

TSL 3

Gene GADD45B, Length 750 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45B-202ENST00000585359 KIAA0586Q9BVV6 1533 aa24.95■■□□□ 1.58
GADD45B-202ENST00000585359 JPH4Q96JJ6 628 aa24.94■■□□□ 1.58
GADD45B-202ENST00000585359 PRG4Q92954 1404 aaPredicted RBP24.93■■□□□ 1.58
GADD45B-202ENST00000585359 RAPGEF2Q9Y4G8 1499 aa24.88■■□□□ 1.57
GADD45B-202ENST00000585359 IQGAP2Q13576 1575 aa24.79■■□□□ 1.56
GADD45B-202ENST00000585359 PRXQ9BXM0 1461 aa24.77■■□□□ 1.56
GADD45B-202ENST00000585359 TRHP20396 242 aaPredicted RBP24.75■■□□□ 1.55
GADD45B-202ENST00000585359 CHIC1Q5VXU3 224 aa24.68■■□□□ 1.54
GADD45B-202ENST00000585359 EEA1Q15075 1411 aa24.67■■□□□ 1.54
GADD45B-202ENST00000585359 CTTNBP2Q8WZ74 1663 aa24.66■■□□□ 1.54
GADD45B-202ENST00000585359 CSRNP3Q8WYN3 585 aa24.66■■□□□ 1.54
GADD45B-202ENST00000585359 UGGT2Q9NYU1 1516 aa24.66■■□□□ 1.54
GADD45B-202ENST00000585359 CARMIL2Q6F5E8 1435 aa24.65■■□□□ 1.54
GADD45B-202ENST00000585359 DISP1Q96F81 1524 aa24.65■■□□□ 1.54
GADD45B-202ENST00000585359 ADCY10Q96PN6 1610 aa24.61■■□□□ 1.53
GADD45B-202ENST00000585359 TNIKQ9UKE5 1360 aa24.6■■□□□ 1.53
GADD45B-202ENST00000585359 PTPRGP23470 1445 aa24.6■■□□□ 1.53
GADD45B-202ENST00000585359 KIAA0556O60303 1618 aa24.56■■□□□ 1.52
GADD45B-202ENST00000585359 FAM9AQ8IZU1 332 aaPredicted RBP24.54■■□□□ 1.52
GADD45B-202ENST00000585359 TTBK1Q5TCY1 1321 aaPredicted RBP24.52■■□□□ 1.52
GADD45B-202ENST00000585359 MAPKBP1O60336 1514 aa24.47■■□□□ 1.51
GADD45B-202ENST00000585359 GOLGA3Q08378 1498 aa24.47■■□□□ 1.51
GADD45B-202ENST00000585359 KIF21BO75037 1637 aa24.46■■□□□ 1.51
GADD45B-202ENST00000585359 NPM1P06748 294 aaKnown RBP eCLIP24.45■■□□□ 1.5
GADD45B-202ENST00000585359 UACAQ9BZF9 1416 aa24.44■■□□□ 1.5
GADD45B-202ENST00000585359 UHRF1BP1LA0JNW5 1464 aa24.44■■□□□ 1.5
GADD45B-202ENST00000585359 ABCC2Q92887 1545 aa24.42■■□□□ 1.5
GADD45B-202ENST00000585359 KIF13AQ9H1H9 1805 aa24.4■■□□□ 1.5
GADD45B-202ENST00000585359 ABCC10Q5T3U5 1492 aa24.37■■□□□ 1.49
GADD45B-202ENST00000585359 SAMD9Q5K651 1589 aa24.36■■□□□ 1.49
GADD45B-202ENST00000585359 DIP2BQ9P265 1576 aa24.34■■□□□ 1.49
GADD45B-202ENST00000585359 PLB1Q6P1J6 1458 aa24.34■■□□□ 1.49
GADD45B-202ENST00000585359 KDM5BQ9UGL1 1544 aa24.33■■□□□ 1.49
GADD45B-202ENST00000585359 ABCA8O94911 1581 aa24.32■■□□□ 1.48
GADD45B-202ENST00000585359 FAM69CQ0P6D2 419 aa24.29■■□□□ 1.48
GADD45B-202ENST00000585359 P3H3Q8IVL6 736 aa24.29■■□□□ 1.48
GADD45B-202ENST00000585359 ZCCHC11Q5TAX3 1644 aaKnown RBP24.28■■□□□ 1.48
GADD45B-202ENST00000585359 ASXL2Q76L83 1435 aa24.28■■□□□ 1.48
GADD45B-202ENST00000585359 AEBP2Q6ZN18 517 aaPredicted RBP24.27■■□□□ 1.48
GADD45B-202ENST00000585359 RANGAP1P46060 587 aaPredicted RBP24.23■■□□□ 1.47
GADD45B-202ENST00000585359 EHMT2Q96KQ7 1210 aa24.23■■□□□ 1.47
GADD45B-202ENST00000585359 EFCAB5A4FU69 1503 aa24.2■■□□□ 1.46
GADD45B-202ENST00000585359 UBTFP17480 764 aaKnown RBP24.19■■□□□ 1.46
GADD45B-202ENST00000585359 FHOD3Q2V2M9 1422 aa24.18■■□□□ 1.46
GADD45B-202ENST00000585359 GLI2P10070 1586 aa24.17■■□□□ 1.46
GADD45B-202ENST00000585359 EPRSP07814 1512 aaKnown RBP24.15■■□□□ 1.46
GADD45B-202ENST00000585359 RAPGEF6Q8TEU7 1601 aa24.13■■□□□ 1.45
GADD45B-202ENST00000585359 WDR7Q9Y4E6 1490 aa24.13■■□□□ 1.45
GADD45B-202ENST00000585359 ATP10BO94823 1461 aa24.1■■□□□ 1.45
GADD45B-202ENST00000585359 TSPOAP1O95153 1857 aa24.1■■□□□ 1.45
GADD45B-202ENST00000585359 ARID3CA6NKF2 412 aa24.07■■□□□ 1.44
GADD45B-202ENST00000585359 NUP153P49790 1475 aaKnown RBP24.07■■□□□ 1.44
GADD45B-202ENST00000585359 ARHGAP35Q9NRY4 1499 aa24.07■■□□□ 1.44
GADD45B-202ENST00000585359 PPRC1Q5VV67 1664 aaKnown RBP24.06■■□□□ 1.44
GADD45B-202ENST00000585359 MAP3K4Q9Y6R4 1608 aa24.06■■□□□ 1.44
GADD45B-202ENST00000585359 KDM6BO15054 1643 aa23.97■■□□□ 1.43
GADD45B-202ENST00000585359 KCNH8Q96L42 1107 aa23.97■■□□□ 1.43
GADD45B-202ENST00000585359 FMN1Q68DA7 1419 aa23.95■■□□□ 1.42
GADD45B-202ENST00000585359 CFAP43Q8NDM7 1665 aa23.95■■□□□ 1.42
GADD45B-202ENST00000585359 TEX14Q8IWB6 1497 aa23.92■■□□□ 1.42
GADD45B-202ENST00000585359 CD109Q6YHK3 1445 aa23.92■■□□□ 1.42
GADD45B-202ENST00000585359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.9■■□□□ 1.42
GADD45B-202ENST00000585359 HNRNPUL2Q1KMD3 747 aaKnown RBP23.9■■□□□ 1.42
GADD45B-202ENST00000585359 MAGI3Q5TCQ9 1506 aa23.89■■□□□ 1.42
GADD45B-202ENST00000585359 CDK13Q14004 1512 aaKnown RBP23.88■■□□□ 1.41
GADD45B-202ENST00000585359 ABCA9Q8IUA7 1624 aa23.88■■□□□ 1.41
GADD45B-202ENST00000585359 HECW1Q76N89 1606 aa23.87■■□□□ 1.41
GADD45B-202ENST00000585359 COL17A1Q9UMD9 1497 aaPredicted RBP23.85■■□□□ 1.41
GADD45B-202ENST00000585359 CLIP1P30622 1438 aa23.84■■□□□ 1.41
GADD45B-202ENST00000585359 PLEKHD1A6NEE1 506 aa23.82■■□□□ 1.4
GADD45B-202ENST00000585359 PCF11O94913 1555 aaKnown RBP23.79■■□□□ 1.4
GADD45B-202ENST00000585359 ATP1B4Q9UN42 357 aaPredicted RBP23.79■■□□□ 1.4
GADD45B-202ENST00000585359 LRRIQ1Q96JM4 1722 aa23.79■■□□□ 1.4
GADD45B-202ENST00000585359 CASKIN1Q8WXD9 1431 aa23.76■■□□□ 1.39
GADD45B-202ENST00000585359 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.74■■□□□ 1.39
GADD45B-202ENST00000585359 TTC37Q6PGP7 1564 aa23.73■■□□□ 1.39
GADD45B-202ENST00000585359 FYCO1Q9BQS8 1478 aa23.71■■□□□ 1.39
GADD45B-202ENST00000585359 CEP162Q5TB80 1403 aa23.71■■□□□ 1.39
GADD45B-202ENST00000585359 ARAP3Q8WWN8 1544 aa23.69■■□□□ 1.38
GADD45B-202ENST00000585359 CCDC18Q5T9S5 1454 aa23.68■■□□□ 1.38
GADD45B-202ENST00000585359 LOC105371045A0A1W2PR82 267 aa23.68■■□□□ 1.38
GADD45B-202ENST00000585359 NEO1Q92859 1461 aa23.68■■□□□ 1.38
GADD45B-202ENST00000585359 CDK11AQ9UQ88 783 aaPredicted RBP23.67■■□□□ 1.38
GADD45B-202ENST00000585359 TROQ12816 1431 aaPredicted RBP23.67■■□□□ 1.38
GADD45B-202ENST00000585359 PHLDB1Q86UU1 1377 aa23.66■■□□□ 1.38
GADD45B-202ENST00000585359 KIF14Q15058 1648 aa23.65■■□□□ 1.38
GADD45B-202ENST00000585359 FANCAO15360 1455 aa23.61■■□□□ 1.37
GADD45B-202ENST00000585359 CFAP74Q9C0B2 1584 aa23.59■■□□□ 1.37
GADD45B-202ENST00000585359 PLCH2O75038 1416 aa23.58■■□□□ 1.36
GADD45B-202ENST00000585359 AKNAQ7Z591 1439 aa23.57■■□□□ 1.36
GADD45B-202ENST00000585359 FRMPD1Q5SYB0 1578 aa23.57■■□□□ 1.36
GADD45B-202ENST00000585359 MYO5CQ9NQX4 1742 aa23.56■■□□□ 1.36
GADD45B-202ENST00000585359 RAPGEF3O95398 923 aa23.55■■□□□ 1.36
GADD45B-202ENST00000585359 KDM4FA0A1W2PPD8 638 aa23.53■■□□□ 1.36
GADD45B-202ENST00000585359 RICTORQ6R327 1708 aa23.5■■□□□ 1.35
GADD45B-202ENST00000585359 DENND4BO75064 1496 aaPredicted RBP23.5■■□□□ 1.35
GADD45B-202ENST00000585359 ADGRL1O94910 1474 aa23.47■■□□□ 1.35
GADD45B-202ENST00000585359 ARHGAP5Q13017 1502 aa23.46■■□□□ 1.35
GADD45B-202ENST00000585359 EFCAB2Q5VUJ9 269 aa23.46■■□□□ 1.35
GADD45B-202ENST00000585359 PREX2Q70Z35 1606 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms