RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 CUL7Q14999 1698 aa29.47■■■□□ 2.31
ITGB4-213ENST00000584939 RUSC2Q8N2Y8 1516 aa29.45■■■□□ 2.31
ITGB4-213ENST00000584939 CARMIL1Q5VZK9 1371 aa29.45■■■□□ 2.31
ITGB4-213ENST00000584939 KIAA0586Q9BVV6 1533 aa29.4■■■□□ 2.3
ITGB4-213ENST00000584939 RAPGEF2Q9Y4G8 1499 aa29.2■■■□□ 2.26
ITGB4-213ENST00000584939 NPM1P06748 294 aaKnown RBP eCLIP29.16■■■□□ 2.26
ITGB4-213ENST00000584939 IQGAP2Q13576 1575 aa29.13■■■□□ 2.25
ITGB4-213ENST00000584939 CARMIL2Q6F5E8 1435 aa29.12■■■□□ 2.25
ITGB4-213ENST00000584939 PTPRGP23470 1445 aa29.11■■■□□ 2.25
ITGB4-213ENST00000584939 TTBK1Q5TCY1 1321 aaPredicted RBP29.1■■■□□ 2.25
ITGB4-213ENST00000584939 TNIKQ9UKE5 1360 aa29.07■■■□□ 2.24
ITGB4-213ENST00000584939 ADCY10Q96PN6 1610 aa29.06■■■□□ 2.24
ITGB4-213ENST00000584939 DISP1Q96F81 1524 aa28.99■■■□□ 2.23
ITGB4-213ENST00000584939 MAPKBP1O60336 1514 aa28.98■■■□□ 2.23
ITGB4-213ENST00000584939 FAM69CQ0P6D2 419 aa28.97■■■□□ 2.23
ITGB4-213ENST00000584939 UGGT2Q9NYU1 1516 aa28.97■■■□□ 2.23
ITGB4-213ENST00000584939 PRXQ9BXM0 1461 aa28.97■■■□□ 2.23
ITGB4-213ENST00000584939 ABCC10Q5T3U5 1492 aa28.94■■■□□ 2.22
ITGB4-213ENST00000584939 KIF13AQ9H1H9 1805 aa28.92■■■□□ 2.22
ITGB4-213ENST00000584939 CSRNP3Q8WYN3 585 aa28.88■■■□□ 2.21
ITGB4-213ENST00000584939 ABCC2Q92887 1545 aa28.88■■■□□ 2.21
ITGB4-213ENST00000584939 UACAQ9BZF9 1416 aa28.87■■■□□ 2.21
ITGB4-213ENST00000584939 UHRF1BP1LA0JNW5 1464 aa28.85■■■□□ 2.21
ITGB4-213ENST00000584939 KIAA0556O60303 1618 aa28.85■■■□□ 2.21
ITGB4-213ENST00000584939 DIP2BQ9P265 1576 aa28.84■■■□□ 2.21
ITGB4-213ENST00000584939 CTTNBP2Q8WZ74 1663 aa28.83■■■□□ 2.21
ITGB4-213ENST00000584939 GOLGA3Q08378 1498 aa28.78■■■□□ 2.2
ITGB4-213ENST00000584939 EEA1Q15075 1411 aa28.76■■■□□ 2.19
ITGB4-213ENST00000584939 ASXL2Q76L83 1435 aa28.76■■■□□ 2.19
ITGB4-213ENST00000584939 PLB1Q6P1J6 1458 aa28.74■■■□□ 2.19
ITGB4-213ENST00000584939 FAM9AQ8IZU1 332 aaPredicted RBP28.72■■■□□ 2.19
ITGB4-213ENST00000584939 KDM5BQ9UGL1 1544 aa28.72■■■□□ 2.19
ITGB4-213ENST00000584939 P3H3Q8IVL6 736 aa28.64■■■□□ 2.18
ITGB4-213ENST00000584939 CHIC1Q5VXU3 224 aa28.63■■■□□ 2.17
ITGB4-213ENST00000584939 ZCCHC11Q5TAX3 1644 aaKnown RBP28.61■■■□□ 2.17
ITGB4-213ENST00000584939 GLI2P10070 1586 aa28.6■■■□□ 2.17
ITGB4-213ENST00000584939 TSPOAP1O95153 1857 aa28.59■■■□□ 2.17
ITGB4-213ENST00000584939 ABCA8O94911 1581 aa28.58■■■□□ 2.17
ITGB4-213ENST00000584939 EPRSP07814 1512 aaKnown RBP28.57■■■□□ 2.16
ITGB4-213ENST00000584939 RANGAP1P46060 587 aaPredicted RBP28.53■■■□□ 2.16
ITGB4-213ENST00000584939 AEBP2Q6ZN18 517 aaPredicted RBP28.53■■■□□ 2.16
ITGB4-213ENST00000584939 KDM6BO15054 1643 aa28.51■■■□□ 2.15
ITGB4-213ENST00000584939 WDR7Q9Y4E6 1490 aa28.51■■■□□ 2.15
ITGB4-213ENST00000584939 SAMD9Q5K651 1589 aa28.49■■■□□ 2.15
ITGB4-213ENST00000584939 ARID3CA6NKF2 412 aa28.46■■■□□ 2.15
ITGB4-213ENST00000584939 KIF21BO75037 1637 aa28.46■■■□□ 2.15
ITGB4-213ENST00000584939 KCNH8Q96L42 1107 aa28.45■■■□□ 2.14
ITGB4-213ENST00000584939 PPRC1Q5VV67 1664 aaKnown RBP28.45■■■□□ 2.14
ITGB4-213ENST00000584939 MAP3K4Q9Y6R4 1608 aa28.43■■■□□ 2.14
ITGB4-213ENST00000584939 EHMT2Q96KQ7 1210 aa28.4■■■□□ 2.14
ITGB4-213ENST00000584939 ATP10BO94823 1461 aa28.4■■■□□ 2.14
ITGB4-213ENST00000584939 TEX14Q8IWB6 1497 aa28.38■■■□□ 2.13
ITGB4-213ENST00000584939 FHOD3Q2V2M9 1422 aa28.37■■■□□ 2.13
ITGB4-213ENST00000584939 UBTFP17480 764 aaKnown RBP28.36■■■□□ 2.13
ITGB4-213ENST00000584939 CD109Q6YHK3 1445 aa28.34■■■□□ 2.13
ITGB4-213ENST00000584939 RAPGEF6Q8TEU7 1601 aa28.33■■■□□ 2.13
ITGB4-213ENST00000584939 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.31■■■□□ 2.12
ITGB4-213ENST00000584939 HNRNPUL2Q1KMD3 747 aaKnown RBP28.31■■■□□ 2.12
ITGB4-213ENST00000584939 COL17A1Q9UMD9 1497 aaPredicted RBP28.31■■■□□ 2.12
ITGB4-213ENST00000584939 EFCAB5A4FU69 1503 aa28.28■■■□□ 2.12
ITGB4-213ENST00000584939 MAGI3Q5TCQ9 1506 aa28.27■■■□□ 2.12
ITGB4-213ENST00000584939 NUP153P49790 1475 aaKnown RBP28.26■■■□□ 2.11
ITGB4-213ENST00000584939 CFAP43Q8NDM7 1665 aa28.25■■■□□ 2.11
ITGB4-213ENST00000584939 KDM4FA0A1W2PPD8 638 aa28.18■■■□□ 2.1
ITGB4-213ENST00000584939 PLEKHD1A6NEE1 506 aa28.15■■■□□ 2.1
ITGB4-213ENST00000584939 ABCA9Q8IUA7 1624 aa28.12■■■□□ 2.09
ITGB4-213ENST00000584939 ARHGAP35Q9NRY4 1499 aa28.11■■■□□ 2.09
ITGB4-213ENST00000584939 FMN1Q68DA7 1419 aa28.08■■■□□ 2.09
ITGB4-213ENST00000584939 ATP1B4Q9UN42 357 aaPredicted RBP28.07■■■□□ 2.08
ITGB4-213ENST00000584939 ARAP3Q8WWN8 1544 aa28.04■■■□□ 2.08
ITGB4-213ENST00000584939 PHLDB1Q86UU1 1377 aa28.04■■■□□ 2.08
ITGB4-213ENST00000584939 CDK13Q14004 1512 aaKnown RBP28.01■■■□□ 2.07
ITGB4-213ENST00000584939 ADGRL1O94910 1474 aa27.98■■■□□ 2.07
ITGB4-213ENST00000584939 NEO1Q92859 1461 aa27.98■■■□□ 2.07
ITGB4-213ENST00000584939 RAPGEF3O95398 923 aa27.95■■■□□ 2.06
ITGB4-213ENST00000584939 HECW1Q76N89 1606 aa27.94■■■□□ 2.06
ITGB4-213ENST00000584939 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.93■■■□□ 2.06
ITGB4-213ENST00000584939 CDK11AQ9UQ88 783 aaPredicted RBP27.91■■■□□ 2.06
ITGB4-213ENST00000584939 TTC37Q6PGP7 1564 aa27.86■■■□□ 2.05
ITGB4-213ENST00000584939 FANCAO15360 1455 aa27.86■■■□□ 2.05
ITGB4-213ENST00000584939 AKNAQ7Z591 1439 aa27.85■■■□□ 2.05
ITGB4-213ENST00000584939 CLIP1P30622 1438 aa27.81■■■□□ 2.04
ITGB4-213ENST00000584939 DENND4BO75064 1496 aaPredicted RBP27.81■■■□□ 2.04
ITGB4-213ENST00000584939 PLCH2O75038 1416 aa27.8■■■□□ 2.04
ITGB4-213ENST00000584939 CASKIN1Q8WXD9 1431 aa27.8■■■□□ 2.04
ITGB4-213ENST00000584939 TROQ12816 1431 aaPredicted RBP27.79■■■□□ 2.04
ITGB4-213ENST00000584939 FRMPD1Q5SYB0 1578 aa27.78■■■□□ 2.04
ITGB4-213ENST00000584939 CFAP74Q9C0B2 1584 aa27.78■■■□□ 2.04
ITGB4-213ENST00000584939 PCF11O94913 1555 aaKnown RBP27.74■■■□□ 2.03
ITGB4-213ENST00000584939 EFCAB2Q5VUJ9 269 aa27.73■■■□□ 2.03
ITGB4-213ENST00000584939 LRRIQ1Q96JM4 1722 aa27.72■■■□□ 2.03
ITGB4-213ENST00000584939 CCDC18Q5T9S5 1454 aa27.72■■■□□ 2.03
ITGB4-213ENST00000584939 KIF14Q15058 1648 aa27.72■■■□□ 2.03
ITGB4-213ENST00000584939 SCAPERQ9BY12 1400 aa27.69■■■□□ 2.02
ITGB4-213ENST00000584939 RICTORQ6R327 1708 aa27.69■■■□□ 2.02
ITGB4-213ENST00000584939 FYCO1Q9BQS8 1478 aa27.68■■■□□ 2.02
ITGB4-213ENST00000584939 ARID4BQ4LE39 1312 aaPredicted RBP27.67■■■□□ 2.02
ITGB4-213ENST00000584939 MYO5CQ9NQX4 1742 aa27.65■■■□□ 2.02
ITGB4-213ENST00000584939 ARHGEF40Q8TER5 1519 aa27.62■■■□□ 2.01
ITGB4-213ENST00000584939 POGZQ7Z3K3 1410 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms