RNA–Protein interactions for RNA: ENST00000584716.1

CDK5R1-202, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CDK5R1, Length 962 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-202ENST00000584716 GOLGA3Q08378 1498 aa20.18■□□□□ 0.82
CDK5R1-202ENST00000584716 NUP160Q12769 1436 aa20.14■□□□□ 0.81
CDK5R1-202ENST00000584716 CTTNBP2Q8WZ74 1663 aa20.13■□□□□ 0.81
CDK5R1-202ENST00000584716 RANGAP1P46060 587 aaPredicted RBP20.11■□□□□ 0.81
CDK5R1-202ENST00000584716 KIAA0586Q9BVV6 1533 aa20.08■□□□□ 0.81
CDK5R1-202ENST00000584716 CLASP1Q7Z460 1538 aa20.07■□□□□ 0.8
CDK5R1-202ENST00000584716 IQGAP2Q13576 1575 aa20.05■□□□□ 0.8
CDK5R1-202ENST00000584716 JPH4Q96JJ6 628 aa20.03■□□□□ 0.8
CDK5R1-202ENST00000584716 TNIKQ9UKE5 1360 aa20.01■□□□□ 0.79
CDK5R1-202ENST00000584716 SHROOM2Q13796 1616 aa19.95■□□□□ 0.78
CDK5R1-202ENST00000584716 P3H3Q8IVL6 736 aa19.95■□□□□ 0.78
CDK5R1-202ENST00000584716 PRG4Q92954 1404 aaPredicted RBP19.94■□□□□ 0.78
CDK5R1-202ENST00000584716 UGGT2Q9NYU1 1516 aa19.92■□□□□ 0.78
CDK5R1-202ENST00000584716 TTBK1Q5TCY1 1321 aaPredicted RBP19.91■□□□□ 0.78
CDK5R1-202ENST00000584716 ERCC6L2Q5T890 1561 aa19.91■□□□□ 0.78
CDK5R1-202ENST00000584716 DISP1Q96F81 1524 aa19.87■□□□□ 0.77
CDK5R1-202ENST00000584716 CARMIL2Q6F5E8 1435 aa19.87■□□□□ 0.77
CDK5R1-202ENST00000584716 CEP162Q5TB80 1403 aa19.86■□□□□ 0.77
CDK5R1-202ENST00000584716 CLIP1P30622 1438 aa19.85■□□□□ 0.77
CDK5R1-202ENST00000584716 KIAA0556O60303 1618 aa19.84■□□□□ 0.77
CDK5R1-202ENST00000584716 SAMD9Q5K651 1589 aa19.84■□□□□ 0.77
CDK5R1-202ENST00000584716 ARHGEF11O15085 1522 aa19.84■□□□□ 0.77
CDK5R1-202ENST00000584716 RIMBP3CA6NJZ7 1639 aa19.83■□□□□ 0.76
CDK5R1-202ENST00000584716 RIMBP3BA6NNM3 1639 aa19.83■□□□□ 0.76
CDK5R1-202ENST00000584716 RIMBP3Q9UFD9 1639 aa19.83■□□□□ 0.76
CDK5R1-202ENST00000584716 ARHGAP35Q9NRY4 1499 aa19.82■□□□□ 0.76
CDK5R1-202ENST00000584716 FHOD3Q2V2M9 1422 aa19.81■□□□□ 0.76
CDK5R1-202ENST00000584716 EFCAB5A4FU69 1503 aa19.81■□□□□ 0.76
CDK5R1-202ENST00000584716 PTPRGP23470 1445 aa19.76■□□□□ 0.75
CDK5R1-202ENST00000584716 ARAP1Q96P48 1450 aa19.73■□□□□ 0.75
CDK5R1-202ENST00000584716 CYB5RLQ6IPT4 315 aa19.73■□□□□ 0.75
CDK5R1-202ENST00000584716 ATP1B4Q9UN42 357 aaPredicted RBP19.68■□□□□ 0.74
CDK5R1-202ENST00000584716 FMN1Q68DA7 1419 aa19.65■□□□□ 0.74
CDK5R1-202ENST00000584716 PLB1Q6P1J6 1458 aa19.65■□□□□ 0.74
CDK5R1-202ENST00000584716 ARID3CA6NKF2 412 aa19.62■□□□□ 0.73
CDK5R1-202ENST00000584716 UACAQ9BZF9 1416 aa19.61■□□□□ 0.73
CDK5R1-202ENST00000584716 RAPGEF6Q8TEU7 1601 aa19.61■□□□□ 0.73
CDK5R1-202ENST00000584716 ABCA8O94911 1581 aa19.59■□□□□ 0.73
CDK5R1-202ENST00000584716 VPS8Q8N3P4 1428 aa19.58■□□□□ 0.72
CDK5R1-202ENST00000584716 PCF11O94913 1555 aaKnown RBP19.57■□□□□ 0.72
CDK5R1-202ENST00000584716 ADCY10Q96PN6 1610 aa19.57■□□□□ 0.72
CDK5R1-202ENST00000584716 ABCC2Q92887 1545 aa19.56■□□□□ 0.72
CDK5R1-202ENST00000584716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.55■□□□□ 0.72
CDK5R1-202ENST00000584716 HNRNPUL2Q1KMD3 747 aaKnown RBP19.55■□□□□ 0.72
CDK5R1-202ENST00000584716 CASKIN1Q8WXD9 1431 aa19.55■□□□□ 0.72
CDK5R1-202ENST00000584716 UHRF1BP1LA0JNW5 1464 aa19.53■□□□□ 0.72
CDK5R1-202ENST00000584716 HECW1Q76N89 1606 aa19.52■□□□□ 0.72
CDK5R1-202ENST00000584716 NPM1P06748 294 aaKnown RBP eCLIP19.52■□□□□ 0.72
CDK5R1-202ENST00000584716 NUP153P49790 1475 aaKnown RBP19.52■□□□□ 0.72
CDK5R1-202ENST00000584716 LRRIQ1Q96JM4 1722 aa19.51■□□□□ 0.71
CDK5R1-202ENST00000584716 FYCO1Q9BQS8 1478 aa19.5■□□□□ 0.71
CDK5R1-202ENST00000584716 ZCCHC11Q5TAX3 1644 aaKnown RBP19.47■□□□□ 0.71
CDK5R1-202ENST00000584716 ATP10BO94823 1461 aa19.47■□□□□ 0.71
CDK5R1-202ENST00000584716 EPRSP07814 1512 aaKnown RBP19.46■□□□□ 0.71
CDK5R1-202ENST00000584716 CDK13Q14004 1512 aaKnown RBP19.46■□□□□ 0.71
CDK5R1-202ENST00000584716 APLP2Q06481 763 aa19.46■□□□□ 0.71
CDK5R1-202ENST00000584716 KDM5BQ9UGL1 1544 aa19.45■□□□□ 0.7
CDK5R1-202ENST00000584716 CCDC18Q5T9S5 1454 aa19.41■□□□□ 0.7
CDK5R1-202ENST00000584716 PLEKHD1A6NEE1 506 aa19.38■□□□□ 0.69
CDK5R1-202ENST00000584716 PPARGC1BQ86YN6 1023 aaKnown RBP19.37■□□□□ 0.69
CDK5R1-202ENST00000584716 TIAM1Q13009 1591 aa19.36■□□□□ 0.69
CDK5R1-202ENST00000584716 KCNH8Q96L42 1107 aa19.36■□□□□ 0.69
CDK5R1-202ENST00000584716 CDK11AQ9UQ88 783 aaPredicted RBP19.36■□□□□ 0.69
CDK5R1-202ENST00000584716 CFAP43Q8NDM7 1665 aa19.36■□□□□ 0.69
CDK5R1-202ENST00000584716 ASXL2Q76L83 1435 aa19.34■□□□□ 0.69
CDK5R1-202ENST00000584716 KANK4Q5T7N3 995 aaPredicted RBP19.34■□□□□ 0.69
CDK5R1-202ENST00000584716 MAGI3Q5TCQ9 1506 aa19.31■□□□□ 0.68
CDK5R1-202ENST00000584716 MTUS2Q5JR59 1369 aa19.31■□□□□ 0.68
CDK5R1-202ENST00000584716 MAPKBP1O60336 1514 aa19.3■□□□□ 0.68
CDK5R1-202ENST00000584716 MAP3K1Q13233 1512 aa19.3■□□□□ 0.68
CDK5R1-202ENST00000584716 WDR7Q9Y4E6 1490 aa19.29■□□□□ 0.68
CDK5R1-202ENST00000584716 LRRC9Q6ZRR7 1453 aa19.28■□□□□ 0.68
CDK5R1-202ENST00000584716 TROQ12816 1431 aaPredicted RBP19.27■□□□□ 0.68
CDK5R1-202ENST00000584716 KIF14Q15058 1648 aa19.24■□□□□ 0.67
CDK5R1-202ENST00000584716 EHBP1L1Q8N3D4 1523 aa19.24■□□□□ 0.67
CDK5R1-202ENST00000584716 FAM69CQ0P6D2 419 aa19.23■□□□□ 0.67
CDK5R1-202ENST00000584716 TRHP20396 242 aaPredicted RBP19.22■□□□□ 0.67
CDK5R1-202ENST00000584716 SUPT6HQ7KZ85 1726 aaKnown RBP19.2■□□□□ 0.66
CDK5R1-202ENST00000584716 ABCC10Q5T3U5 1492 aa19.19■□□□□ 0.66
CDK5R1-202ENST00000584716 DIP2BQ9P265 1576 aa19.18■□□□□ 0.66
CDK5R1-202ENST00000584716 KIF13AQ9H1H9 1805 aa19.18■□□□□ 0.66
CDK5R1-202ENST00000584716 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.17■□□□□ 0.66
CDK5R1-202ENST00000584716 NCOA2Q15596 1464 aa19.16■□□□□ 0.66
CDK5R1-202ENST00000584716 TTC37Q6PGP7 1564 aa19.15■□□□□ 0.66
CDK5R1-202ENST00000584716 AEBP2Q6ZN18 517 aaPredicted RBP19.14■□□□□ 0.65
CDK5R1-202ENST00000584716 ABCA9Q8IUA7 1624 aa19.14■□□□□ 0.65
CDK5R1-202ENST00000584716 GLI2P10070 1586 aa19.13■□□□□ 0.65
CDK5R1-202ENST00000584716 TSPOAP1O95153 1857 aa19.13■□□□□ 0.65
CDK5R1-202ENST00000584716 CCNB3Q8WWL7 1395 aa19.12■□□□□ 0.65
CDK5R1-202ENST00000584716 CD109Q6YHK3 1445 aa19.11■□□□□ 0.65
CDK5R1-202ENST00000584716 CDC42BPAQ5VT25 1732 aa19.1■□□□□ 0.65
CDK5R1-202ENST00000584716 MYO5CQ9NQX4 1742 aa19.1■□□□□ 0.65
CDK5R1-202ENST00000584716 MAP3K4Q9Y6R4 1608 aa19.09■□□□□ 0.65
CDK5R1-202ENST00000584716 PHLDB1Q86UU1 1377 aa19.07■□□□□ 0.64
CDK5R1-202ENST00000584716 GPATCH8Q9UKJ3 1502 aaKnown RBP19.07■□□□□ 0.64
CDK5R1-202ENST00000584716 ZNF777Q9ULD5 760 aaPredicted RBP19.07■□□□□ 0.64
CDK5R1-202ENST00000584716 CDC42BPBQ9Y5S2 1711 aa19.07■□□□□ 0.64
CDK5R1-202ENST00000584716 CFDP1Q9UEE9 299 aaPredicted RBP19.05■□□□□ 0.64
CDK5R1-202ENST00000584716 PLCH2O75038 1416 aa19.05■□□□□ 0.64
CDK5R1-202ENST00000584716 ITSN2Q9NZM3 1697 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms