RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 KIAA0586Q9BVV6 1533 aa19.01■□□□□ 0.63
CDRT1-207ENST00000583965 IQGAP2Q13576 1575 aa19■□□□□ 0.63
CDRT1-207ENST00000583965 UBTFP17480 764 aaKnown RBP18.96■□□□□ 0.63
CDRT1-207ENST00000583965 SHROOM2Q13796 1616 aa18.95■□□□□ 0.62
CDRT1-207ENST00000583965 EHMT2Q96KQ7 1210 aa18.93■□□□□ 0.62
CDRT1-207ENST00000583965 TNIKQ9UKE5 1360 aa18.93■□□□□ 0.62
CDRT1-207ENST00000583965 UGGT2Q9NYU1 1516 aa18.9■□□□□ 0.62
CDRT1-207ENST00000583965 LOC105371045A0A1W2PR82 267 aa18.89■□□□□ 0.61
CDRT1-207ENST00000583965 JPH4Q96JJ6 628 aa18.86■□□□□ 0.61
CDRT1-207ENST00000583965 SAMD9Q5K651 1589 aa18.83■□□□□ 0.6
CDRT1-207ENST00000583965 EFCAB5A4FU69 1503 aa18.83■□□□□ 0.6
CDRT1-207ENST00000583965 KIAA0556O60303 1618 aa18.8■□□□□ 0.6
CDRT1-207ENST00000583965 CARMIL2Q6F5E8 1435 aa18.8■□□□□ 0.6
CDRT1-207ENST00000583965 PRG4Q92954 1404 aaPredicted RBP18.8■□□□□ 0.6
CDRT1-207ENST00000583965 DISP1Q96F81 1524 aa18.79■□□□□ 0.6
CDRT1-207ENST00000583965 CEP162Q5TB80 1403 aa18.76■□□□□ 0.59
CDRT1-207ENST00000583965 ERCC6L2Q5T890 1561 aa18.75■□□□□ 0.59
CDRT1-207ENST00000583965 CLIP1P30622 1438 aa18.74■□□□□ 0.59
CDRT1-207ENST00000583965 ARHGEF11O15085 1522 aa18.74■□□□□ 0.59
CDRT1-207ENST00000583965 RIMBP3CA6NJZ7 1639 aa18.74■□□□□ 0.59
CDRT1-207ENST00000583965 RIMBP3BA6NNM3 1639 aa18.74■□□□□ 0.59
CDRT1-207ENST00000583965 RIMBP3Q9UFD9 1639 aa18.74■□□□□ 0.59
CDRT1-207ENST00000583965 ARHGAP35Q9NRY4 1499 aa18.73■□□□□ 0.59
CDRT1-207ENST00000583965 RANGAP1P46060 587 aaPredicted RBP18.71■□□□□ 0.59
CDRT1-207ENST00000583965 FHOD3Q2V2M9 1422 aa18.66■□□□□ 0.58
CDRT1-207ENST00000583965 DNAJC5Q9H3Z4 198 aa18.65■□□□□ 0.58
CDRT1-207ENST00000583965 ARAP1Q96P48 1450 aa18.64■□□□□ 0.57
CDRT1-207ENST00000583965 P3H3Q8IVL6 736 aa18.63■□□□□ 0.57
CDRT1-207ENST00000583965 PTPRGP23470 1445 aa18.63■□□□□ 0.57
CDRT1-207ENST00000583965 FMN1Q68DA7 1419 aa18.61■□□□□ 0.57
CDRT1-207ENST00000583965 RAPGEF6Q8TEU7 1601 aa18.57■□□□□ 0.56
CDRT1-207ENST00000583965 ABCA8O94911 1581 aa18.56■□□□□ 0.56
CDRT1-207ENST00000583965 VPS8Q8N3P4 1428 aa18.53■□□□□ 0.56
CDRT1-207ENST00000583965 UACAQ9BZF9 1416 aa18.53■□□□□ 0.56
CDRT1-207ENST00000583965 UHRF1BP1LA0JNW5 1464 aa18.52■□□□□ 0.56
CDRT1-207ENST00000583965 TTBK1Q5TCY1 1321 aaPredicted RBP18.52■□□□□ 0.56
CDRT1-207ENST00000583965 PCF11O94913 1555 aaKnown RBP18.52■□□□□ 0.56
CDRT1-207ENST00000583965 ABCC2Q92887 1545 aa18.52■□□□□ 0.56
CDRT1-207ENST00000583965 HECW1Q76N89 1606 aa18.52■□□□□ 0.55
CDRT1-207ENST00000583965 PLB1Q6P1J6 1458 aa18.52■□□□□ 0.55
CDRT1-207ENST00000583965 ADCY10Q96PN6 1610 aa18.51■□□□□ 0.55
CDRT1-207ENST00000583965 FYCO1Q9BQS8 1478 aa18.51■□□□□ 0.55
CDRT1-207ENST00000583965 CASKIN1Q8WXD9 1431 aa18.49■□□□□ 0.55
CDRT1-207ENST00000583965 CYB5RLQ6IPT4 315 aa18.48■□□□□ 0.55
CDRT1-207ENST00000583965 LRRIQ1Q96JM4 1722 aa18.47■□□□□ 0.55
CDRT1-207ENST00000583965 NUP153P49790 1475 aaKnown RBP18.45■□□□□ 0.54
CDRT1-207ENST00000583965 ZCCHC11Q5TAX3 1644 aaKnown RBP18.43■□□□□ 0.54
CDRT1-207ENST00000583965 CCDC18Q5T9S5 1454 aa18.42■□□□□ 0.54
CDRT1-207ENST00000583965 KDM5BQ9UGL1 1544 aa18.42■□□□□ 0.54
CDRT1-207ENST00000583965 EPRSP07814 1512 aaKnown RBP18.4■□□□□ 0.54
CDRT1-207ENST00000583965 CFAP43Q8NDM7 1665 aa18.4■□□□□ 0.54
CDRT1-207ENST00000583965 ATP1B4Q9UN42 357 aaPredicted RBP18.38■□□□□ 0.53
CDRT1-207ENST00000583965 ATP10BO94823 1461 aa18.37■□□□□ 0.53
CDRT1-207ENST00000583965 MAP3K1Q13233 1512 aa18.37■□□□□ 0.53
CDRT1-207ENST00000583965 CDK13Q14004 1512 aaKnown RBP18.35■□□□□ 0.53
CDRT1-207ENST00000583965 NPM1P06748 294 aaKnown RBP eCLIP18.35■□□□□ 0.53
CDRT1-207ENST00000583965 TIAM1Q13009 1591 aa18.34■□□□□ 0.53
CDRT1-207ENST00000583965 MAPKBP1O60336 1514 aa18.32■□□□□ 0.52
CDRT1-207ENST00000583965 APLP2Q06481 763 aa18.3■□□□□ 0.52
CDRT1-207ENST00000583965 CDK11AQ9UQ88 783 aaPredicted RBP18.29■□□□□ 0.52
CDRT1-207ENST00000583965 ARID3CA6NKF2 412 aa18.28■□□□□ 0.52
CDRT1-207ENST00000583965 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.28■□□□□ 0.52
CDRT1-207ENST00000583965 HNRNPUL2Q1KMD3 747 aaKnown RBP18.28■□□□□ 0.52
CDRT1-207ENST00000583965 WDR7Q9Y4E6 1490 aa18.26■□□□□ 0.51
CDRT1-207ENST00000583965 ASXL2Q76L83 1435 aa18.25■□□□□ 0.51
CDRT1-207ENST00000583965 EHBP1L1Q8N3D4 1523 aa18.25■□□□□ 0.51
CDRT1-207ENST00000583965 PLEKHD1A6NEE1 506 aa18.25■□□□□ 0.51
CDRT1-207ENST00000583965 TROQ12816 1431 aaPredicted RBP18.23■□□□□ 0.51
CDRT1-207ENST00000583965 LRRC9Q6ZRR7 1453 aa18.23■□□□□ 0.51
CDRT1-207ENST00000583965 MAGI3Q5TCQ9 1506 aa18.23■□□□□ 0.51
CDRT1-207ENST00000583965 SUPT6HQ7KZ85 1726 aaKnown RBP18.21■□□□□ 0.51
CDRT1-207ENST00000583965 MTUS2Q5JR59 1369 aa18.21■□□□□ 0.51
CDRT1-207ENST00000583965 KIF14Q15058 1648 aa18.21■□□□□ 0.51
CDRT1-207ENST00000583965 KIF13AQ9H1H9 1805 aa18.19■□□□□ 0.5
CDRT1-207ENST00000583965 DIP2BQ9P265 1576 aa18.17■□□□□ 0.5
CDRT1-207ENST00000583965 GLI2P10070 1586 aa18.16■□□□□ 0.5
CDRT1-207ENST00000583965 ABCA9Q8IUA7 1624 aa18.16■□□□□ 0.5
CDRT1-207ENST00000583965 ABCC10Q5T3U5 1492 aa18.15■□□□□ 0.5
CDRT1-207ENST00000583965 KANK4Q5T7N3 995 aaPredicted RBP18.15■□□□□ 0.5
CDRT1-207ENST00000583965 MYO5CQ9NQX4 1742 aa18.13■□□□□ 0.49
CDRT1-207ENST00000583965 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.13■□□□□ 0.49
CDRT1-207ENST00000583965 CDC42BPAQ5VT25 1732 aa18.12■□□□□ 0.49
CDRT1-207ENST00000583965 KCNH8Q96L42 1107 aa18.11■□□□□ 0.49
CDRT1-207ENST00000583965 TTC37Q6PGP7 1564 aa18.11■□□□□ 0.49
CDRT1-207ENST00000583965 MAP3K4Q9Y6R4 1608 aa18.11■□□□□ 0.49
CDRT1-207ENST00000583965 ITSN2Q9NZM3 1697 aa18.11■□□□□ 0.49
CDRT1-207ENST00000583965 NCOA2Q15596 1464 aa18.09■□□□□ 0.49
CDRT1-207ENST00000583965 CDC42BPBQ9Y5S2 1711 aa18.07■□□□□ 0.48
CDRT1-207ENST00000583965 PREX2Q70Z35 1606 aa18.07■□□□□ 0.48
CDRT1-207ENST00000583965 TSPOAP1O95153 1857 aa18.06■□□□□ 0.48
CDRT1-207ENST00000583965 ARAP3Q8WWN8 1544 aa18.05■□□□□ 0.48
CDRT1-207ENST00000583965 FAM69CQ0P6D2 419 aa18.04■□□□□ 0.48
CDRT1-207ENST00000583965 CCNB3Q8WWL7 1395 aa18.04■□□□□ 0.48
CDRT1-207ENST00000583965 CD109Q6YHK3 1445 aa18.02■□□□□ 0.48
CDRT1-207ENST00000583965 CFAP74Q9C0B2 1584 aa18.02■□□□□ 0.48
CDRT1-207ENST00000583965 PPARGC1BQ86YN6 1023 aaKnown RBP18.01■□□□□ 0.47
CDRT1-207ENST00000583965 PPRC1Q5VV67 1664 aaKnown RBP18.01■□□□□ 0.47
CDRT1-207ENST00000583965 GPATCH8Q9UKJ3 1502 aaKnown RBP18.01■□□□□ 0.47
CDRT1-207ENST00000583965 PLCH2O75038 1416 aa18■□□□□ 0.47
CDRT1-207ENST00000583965 MYOM3Q5VTT5 1437 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms