RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 CEP162Q5TB80 1403 aa29.19■■■□□ 2.26
NDEL1-217ENST00000583683 CEP170Q5SW79 1584 aa29.15■■■□□ 2.26
NDEL1-217ENST00000583683 NUP160Q12769 1436 aa29.12■■■□□ 2.25
NDEL1-217ENST00000583683 KIAA0586Q9BVV6 1533 aa29.07■■■□□ 2.24
NDEL1-217ENST00000583683 IQGAP2Q13576 1575 aa29.07■■■□□ 2.24
NDEL1-217ENST00000583683 CLIP1P30622 1438 aa29.07■■■□□ 2.24
NDEL1-217ENST00000583683 RANGAP1P46060 587 aaPredicted RBP29.06■■■□□ 2.24
NDEL1-217ENST00000583683 ARHGAP35Q9NRY4 1499 aa28.97■■■□□ 2.23
NDEL1-217ENST00000583683 UGGT2Q9NYU1 1516 aa28.93■■■□□ 2.22
NDEL1-217ENST00000583683 EFCAB5A4FU69 1503 aa28.92■■■□□ 2.22
NDEL1-217ENST00000583683 SAMD9Q5K651 1589 aa28.91■■■□□ 2.22
NDEL1-217ENST00000583683 CLASP1Q7Z460 1538 aa28.88■■■□□ 2.21
NDEL1-217ENST00000583683 ARAP1Q96P48 1450 aa28.87■■■□□ 2.21
NDEL1-217ENST00000583683 JPH4Q96JJ6 628 aa28.85■■■□□ 2.21
NDEL1-217ENST00000583683 SHROOM2Q13796 1616 aa28.82■■■□□ 2.2
NDEL1-217ENST00000583683 DISP1Q96F81 1524 aa28.81■■■□□ 2.2
NDEL1-217ENST00000583683 P3H3Q8IVL6 736 aa28.8■■■□□ 2.2
NDEL1-217ENST00000583683 OSCARQ8IYS5 282 aa28.79■■■□□ 2.2
NDEL1-217ENST00000583683 FHOD3Q2V2M9 1422 aa28.79■■■□□ 2.2
NDEL1-217ENST00000583683 KIAA0556O60303 1618 aa28.78■■■□□ 2.2
NDEL1-217ENST00000583683 VPS8Q8N3P4 1428 aa28.75■■■□□ 2.19
NDEL1-217ENST00000583683 PRG4Q92954 1404 aaPredicted RBP28.71■■■□□ 2.19
NDEL1-217ENST00000583683 CARMIL2Q6F5E8 1435 aa28.7■■■□□ 2.19
NDEL1-217ENST00000583683 FMN1Q68DA7 1419 aa28.64■■■□□ 2.18
NDEL1-217ENST00000583683 ERCC6L2Q5T890 1561 aa28.62■■■□□ 2.17
NDEL1-217ENST00000583683 PCF11O94913 1555 aaKnown RBP28.58■■■□□ 2.17
NDEL1-217ENST00000583683 CASKIN1Q8WXD9 1431 aa28.53■■■□□ 2.16
NDEL1-217ENST00000583683 TTBK1Q5TCY1 1321 aaPredicted RBP28.52■■■□□ 2.16
NDEL1-217ENST00000583683 FYCO1Q9BQS8 1478 aa28.52■■■□□ 2.16
NDEL1-217ENST00000583683 PTPRGP23470 1445 aa28.47■■■□□ 2.15
NDEL1-217ENST00000583683 RAPGEF6Q8TEU7 1601 aa28.44■■■□□ 2.14
NDEL1-217ENST00000583683 PLB1Q6P1J6 1458 aa28.43■■■□□ 2.14
NDEL1-217ENST00000583683 LRRIQ1Q96JM4 1722 aa28.43■■■□□ 2.14
NDEL1-217ENST00000583683 ATP1B4Q9UN42 357 aaPredicted RBP28.41■■■□□ 2.14
NDEL1-217ENST00000583683 HECW1Q76N89 1606 aa28.41■■■□□ 2.14
NDEL1-217ENST00000583683 ABCA8O94911 1581 aa28.41■■■□□ 2.14
NDEL1-217ENST00000583683 APLP2Q06481 763 aa28.39■■■□□ 2.14
NDEL1-217ENST00000583683 MAP3K1Q13233 1512 aa28.36■■■□□ 2.13
NDEL1-217ENST00000583683 ARHGEF11O15085 1522 aa28.36■■■□□ 2.13
NDEL1-217ENST00000583683 TIAM1Q13009 1591 aa28.36■■■□□ 2.13
NDEL1-217ENST00000583683 NUP153P49790 1475 aaKnown RBP28.35■■■□□ 2.13
NDEL1-217ENST00000583683 CFAP43Q8NDM7 1665 aa28.35■■■□□ 2.13
NDEL1-217ENST00000583683 PPARGC1BQ86YN6 1023 aaKnown RBP28.32■■■□□ 2.12
NDEL1-217ENST00000583683 EPRSP07814 1512 aaKnown RBP28.32■■■□□ 2.12
NDEL1-217ENST00000583683 UACAQ9BZF9 1416 aa28.31■■■□□ 2.12
NDEL1-217ENST00000583683 CCDC18Q5T9S5 1454 aa28.3■■■□□ 2.12
NDEL1-217ENST00000583683 RIMBP3CA6NJZ7 1639 aa28.27■■■□□ 2.12
NDEL1-217ENST00000583683 RIMBP3BA6NNM3 1639 aa28.27■■■□□ 2.12
NDEL1-217ENST00000583683 RIMBP3Q9UFD9 1639 aa28.27■■■□□ 2.12
NDEL1-217ENST00000583683 CDK13Q14004 1512 aaKnown RBP28.26■■■□□ 2.12
NDEL1-217ENST00000583683 KANK4Q5T7N3 995 aaPredicted RBP28.26■■■□□ 2.11
NDEL1-217ENST00000583683 ABCC2Q92887 1545 aa28.26■■■□□ 2.11
NDEL1-217ENST00000583683 ARID3CA6NKF2 412 aa28.24■■■□□ 2.11
NDEL1-217ENST00000583683 UHRF1BP1LA0JNW5 1464 aa28.23■■■□□ 2.11
NDEL1-217ENST00000583683 LRRC9Q6ZRR7 1453 aa28.22■■■□□ 2.11
NDEL1-217ENST00000583683 ATP10BO94823 1461 aa28.19■■■□□ 2.1
NDEL1-217ENST00000583683 ADCY10Q96PN6 1610 aa28.18■■■□□ 2.1
NDEL1-217ENST00000583683 MAGI3Q5TCQ9 1506 aa28.15■■■□□ 2.1
NDEL1-217ENST00000583683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.12■■■□□ 2.09
NDEL1-217ENST00000583683 HNRNPUL2Q1KMD3 747 aaKnown RBP28.12■■■□□ 2.09
NDEL1-217ENST00000583683 KDM5BQ9UGL1 1544 aa28.11■■■□□ 2.09
NDEL1-217ENST00000583683 MTUS2Q5JR59 1369 aa28.11■■■□□ 2.09
NDEL1-217ENST00000583683 EHBP1L1Q8N3D4 1523 aa28.1■■■□□ 2.09
NDEL1-217ENST00000583683 ZCCHC11Q5TAX3 1644 aaKnown RBP28.09■■■□□ 2.09
NDEL1-217ENST00000583683 CDK11AQ9UQ88 783 aaPredicted RBP28.06■■■□□ 2.08
NDEL1-217ENST00000583683 CYB5RLQ6IPT4 315 aa28.05■■■□□ 2.08
NDEL1-217ENST00000583683 SUPT6HQ7KZ85 1726 aaKnown RBP28.02■■■□□ 2.08
NDEL1-217ENST00000583683 TROQ12816 1431 aaPredicted RBP28.01■■■□□ 2.07
NDEL1-217ENST00000583683 PLEKHD1A6NEE1 506 aa27.99■■■□□ 2.07
NDEL1-217ENST00000583683 NCOA2Q15596 1464 aa27.96■■■□□ 2.07
NDEL1-217ENST00000583683 KIF14Q15058 1648 aa27.93■■■□□ 2.06
NDEL1-217ENST00000583683 TRIM26Q12899 539 aaPredicted RBP27.92■■■□□ 2.06
NDEL1-217ENST00000583683 PHLDB1Q86UU1 1377 aa27.92■■■□□ 2.06
NDEL1-217ENST00000583683 NPM1P06748 294 aaKnown RBP eCLIP27.9■■■□□ 2.06
NDEL1-217ENST00000583683 WDR7Q9Y4E6 1490 aa27.85■■■□□ 2.05
NDEL1-217ENST00000583683 ASXL2Q76L83 1435 aa27.84■■■□□ 2.05
NDEL1-217ENST00000583683 DNAJC5Q9H3Z4 198 aa27.84■■■□□ 2.05
NDEL1-217ENST00000583683 RRBP1Q9P2E9 1410 aaKnown RBP27.82■■■□□ 2.04
NDEL1-217ENST00000583683 ABCC10Q5T3U5 1492 aa27.82■■■□□ 2.04
NDEL1-217ENST00000583683 MYOM3Q5VTT5 1437 aa27.81■■■□□ 2.04
NDEL1-217ENST00000583683 MAPKBP1O60336 1514 aa27.79■■■□□ 2.04
NDEL1-217ENST00000583683 KCNH8Q96L42 1107 aa27.78■■■□□ 2.04
NDEL1-217ENST00000583683 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.77■■■□□ 2.04
NDEL1-217ENST00000583683 CCNB3Q8WWL7 1395 aa27.77■■■□□ 2.04
NDEL1-217ENST00000583683 PCGF6Q9BYE7 350 aa27.76■■■□□ 2.04
NDEL1-217ENST00000583683 FGD6Q6ZV73 1430 aa27.76■■■□□ 2.03
NDEL1-217ENST00000583683 TTC37Q6PGP7 1564 aa27.75■■■□□ 2.03
NDEL1-217ENST00000583683 CDC42BPAQ5VT25 1732 aa27.75■■■□□ 2.03
NDEL1-217ENST00000583683 ITSN2Q9NZM3 1697 aa27.74■■■□□ 2.03
NDEL1-217ENST00000583683 GPATCH8Q9UKJ3 1502 aaKnown RBP27.74■■■□□ 2.03
NDEL1-217ENST00000583683 MIA2Q96PC5 1412 aa27.7■■■□□ 2.02
NDEL1-217ENST00000583683 PTPN23Q9H3S7 1636 aa27.68■■■□□ 2.02
NDEL1-217ENST00000583683 ABCA9Q8IUA7 1624 aa27.68■■■□□ 2.02
NDEL1-217ENST00000583683 MYO5CQ9NQX4 1742 aa27.67■■■□□ 2.02
NDEL1-217ENST00000583683 PREX2Q70Z35 1606 aa27.67■■■□□ 2.02
NDEL1-217ENST00000583683 CDC42BPBQ9Y5S2 1711 aa27.66■■■□□ 2.02
NDEL1-217ENST00000583683 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.64■■■□□ 2.014e-9■■■■■ 44
NDEL1-217ENST00000583683 TCOF1Q13428 1488 aaKnown RBP27.63■■■□□ 2.01
NDEL1-217ENST00000583683 FAM50AQ14320 339 aaKnown RBP27.62■■■□□ 2.01
NDEL1-217ENST00000583683 CFDP1Q9UEE9 299 aaPredicted RBP27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms