RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 CUL7Q14999 1698 aa42.89■■■■■ 4.46
TSEN54-209ENST00000583454 JPH4Q96JJ6 628 aa42.88■■■■■ 4.45
TSEN54-209ENST00000583454 KIAA0586Q9BVV6 1533 aa42.73■■■■■ 4.43
TSEN54-209ENST00000583454 KIF13AQ9H1H9 1805 aa42.67■■■■■ 4.42
TSEN54-209ENST00000583454 CARMIL1Q5VZK9 1371 aa42.58■■■■■ 4.41
TSEN54-209ENST00000583454 ADCY10Q96PN6 1610 aa42.57■■■■■ 4.4
TSEN54-209ENST00000583454 MAPKBP1O60336 1514 aa42.46■■■■■ 4.39
TSEN54-209ENST00000583454 IQGAP2Q13576 1575 aa42.38■■■■■ 4.37
TSEN54-209ENST00000583454 ABCC10Q5T3U5 1492 aa42.36■■■■■ 4.37
TSEN54-209ENST00000583454 DIP2BQ9P265 1576 aa42.33■■■■■ 4.37
TSEN54-209ENST00000583454 NPM1P06748 294 aaKnown RBP eCLIP42.27■■■■■ 4.36
TSEN54-209ENST00000583454 PTPRGP23470 1445 aa42.25■■■■■ 4.35
TSEN54-209ENST00000583454 RAPGEF2Q9Y4G8 1499 aa42.23■■■■■ 4.35
TSEN54-209ENST00000583454 CARMIL2Q6F5E8 1435 aa42.22■■■■■ 4.35
TSEN54-209ENST00000583454 TNIKQ9UKE5 1360 aa42.2■■■■■ 4.35
TSEN54-209ENST00000583454 FAM69CQ0P6D2 419 aa42.2■■■■■ 4.35
TSEN54-209ENST00000583454 DISP1Q96F81 1524 aa42.2■■■■■ 4.35
TSEN54-209ENST00000583454 UGGT2Q9NYU1 1516 aa42.13■■■■■ 4.33
TSEN54-209ENST00000583454 ABCC2Q92887 1545 aa42.1■■■■■ 4.33
TSEN54-209ENST00000583454 UHRF1BP1LA0JNW5 1464 aa42.05■■■■■ 4.32
TSEN54-209ENST00000583454 TTBK1Q5TCY1 1321 aaPredicted RBP42.05■■■■■ 4.32
TSEN54-209ENST00000583454 CTTNBP2Q8WZ74 1663 aa42.02■■■■■ 4.32
TSEN54-209ENST00000583454 KIAA0556O60303 1618 aa42.02■■■■■ 4.32
TSEN54-209ENST00000583454 TSPOAP1O95153 1857 aa42.01■■■■■ 4.32
TSEN54-209ENST00000583454 UACAQ9BZF9 1416 aa41.97■■■■■ 4.31
TSEN54-209ENST00000583454 ASXL2Q76L83 1435 aa41.91■■■■■ 4.3
TSEN54-209ENST00000583454 AEBP2Q6ZN18 517 aaPredicted RBP41.9■■■■■ 4.3
TSEN54-209ENST00000583454 PRXQ9BXM0 1461 aa41.9■■■■■ 4.3
TSEN54-209ENST00000583454 KDM6BO15054 1643 aa41.87■■■■■ 4.29
TSEN54-209ENST00000583454 KDM5BQ9UGL1 1544 aa41.87■■■■■ 4.29
TSEN54-209ENST00000583454 CHIC1Q5VXU3 224 aa41.87■■■■■ 4.29
TSEN54-209ENST00000583454 PLB1Q6P1J6 1458 aa41.86■■■■■ 4.29
TSEN54-209ENST00000583454 GLI2P10070 1586 aa41.86■■■■■ 4.29
TSEN54-209ENST00000583454 PPRC1Q5VV67 1664 aaKnown RBP41.84■■■■■ 4.29
TSEN54-209ENST00000583454 ZCCHC11Q5TAX3 1644 aaKnown RBP41.82■■■■■ 4.29
TSEN54-209ENST00000583454 EPRSP07814 1512 aaKnown RBP41.69■■■■■ 4.27
TSEN54-209ENST00000583454 GOLGA3Q08378 1498 aa41.69■■■■■ 4.26
TSEN54-209ENST00000583454 MAP3K4Q9Y6R4 1608 aa41.68■■■■■ 4.26
TSEN54-209ENST00000583454 ABCA8O94911 1581 aa41.64■■■■■ 4.26
TSEN54-209ENST00000583454 EEA1Q15075 1411 aa41.54■■■■■ 4.24
TSEN54-209ENST00000583454 WDR7Q9Y4E6 1490 aa41.53■■■■■ 4.24
TSEN54-209ENST00000583454 CSRNP3Q8WYN3 585 aa41.51■■■■■ 4.24
TSEN54-209ENST00000583454 COL17A1Q9UMD9 1497 aaPredicted RBP41.46■■■■■ 4.23
TSEN54-209ENST00000583454 SAMD9Q5K651 1589 aa41.42■■■■■ 4.22
TSEN54-209ENST00000583454 TEX14Q8IWB6 1497 aa41.41■■■■■ 4.22
TSEN54-209ENST00000583454 KDM4FA0A1W2PPD8 638 aa41.38■■■■■ 4.21
TSEN54-209ENST00000583454 CFAP43Q8NDM7 1665 aa41.36■■■■■ 4.21
TSEN54-209ENST00000583454 FAM9AQ8IZU1 332 aaPredicted RBP41.32■■■■■ 4.21
TSEN54-209ENST00000583454 P3H3Q8IVL6 736 aa41.27■■■■■ 4.2
TSEN54-209ENST00000583454 MAGI3Q5TCQ9 1506 aa41.26■■■■■ 4.2
TSEN54-209ENST00000583454 ATP10BO94823 1461 aa41.24■■■■■ 4.19
TSEN54-209ENST00000583454 CD109Q6YHK3 1445 aa41.22■■■■■ 4.19
TSEN54-209ENST00000583454 RAPGEF6Q8TEU7 1601 aa41.18■■■■■ 4.18
TSEN54-209ENST00000583454 KCNH8Q96L42 1107 aa41.18■■■■■ 4.18
TSEN54-209ENST00000583454 KIF21BO75037 1637 aa41.13■■■■■ 4.17
TSEN54-209ENST00000583454 ARID3CA6NKF2 412 aa41.11■■■■■ 4.17
TSEN54-209ENST00000583454 ADGRL1O94910 1474 aa41.09■■■■■ 4.17
TSEN54-209ENST00000583454 ABCA9Q8IUA7 1624 aa41.07■■■■■ 4.16
TSEN54-209ENST00000583454 NUP153P49790 1475 aaKnown RBP41.03■■■■■ 4.16
TSEN54-209ENST00000583454 FHOD3Q2V2M9 1422 aa41.03■■■■■ 4.16
TSEN54-209ENST00000583454 ARAP3Q8WWN8 1544 aa40.95■■■■■ 4.15
TSEN54-209ENST00000583454 EFCAB5A4FU69 1503 aa40.94■■■■■ 4.14
TSEN54-209ENST00000583454 RANGAP1P46060 587 aaPredicted RBP40.93■■■■■ 4.14
TSEN54-209ENST00000583454 NEO1Q92859 1461 aa40.77■■■■■ 4.12
TSEN54-209ENST00000583454 PHLDB1Q86UU1 1377 aa40.76■■■■■ 4.12
TSEN54-209ENST00000583454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.76■■■■■ 4.12
TSEN54-209ENST00000583454 HNRNPUL2Q1KMD3 747 aaKnown RBP40.76■■■■■ 4.12
TSEN54-209ENST00000583454 UBTFP17480 764 aaKnown RBP40.73■■■■■ 4.11
TSEN54-209ENST00000583454 EHMT2Q96KQ7 1210 aa40.72■■■■■ 4.11
TSEN54-209ENST00000583454 FRMPD1Q5SYB0 1578 aa40.71■■■■■ 4.11
TSEN54-209ENST00000583454 CDK13Q14004 1512 aaKnown RBP40.64■■■■■ 4.1
TSEN54-209ENST00000583454 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.64■■■■■ 4.1
TSEN54-209ENST00000583454 TTC37Q6PGP7 1564 aa40.62■■■■■ 4.09
TSEN54-209ENST00000583454 PLEKHD1A6NEE1 506 aa40.62■■■■■ 4.09
TSEN54-209ENST00000583454 ARHGAP35Q9NRY4 1499 aa40.62■■■■■ 4.09
TSEN54-209ENST00000583454 RAPGEF3O95398 923 aa40.6■■■■■ 4.09
TSEN54-209ENST00000583454 RICTORQ6R327 1708 aa40.56■■■■■ 4.08
TSEN54-209ENST00000583454 HECW2Q9P2P5 1572 aa40.53■■■■■ 4.08
TSEN54-209ENST00000583454 CFAP74Q9C0B2 1584 aa40.52■■■■■ 4.08
TSEN54-209ENST00000583454 HECW1Q76N89 1606 aa40.51■■■■■ 4.08
TSEN54-209ENST00000583454 FMN1Q68DA7 1419 aa40.5■■■■■ 4.07
TSEN54-209ENST00000583454 ADAMTSL3P82987 1691 aa40.5■■■■■ 4.07
TSEN54-209ENST00000583454 FANCAO15360 1455 aa40.49■■■■■ 4.07
TSEN54-209ENST00000583454 AKNAQ7Z591 1439 aa40.47■■■■■ 4.07
TSEN54-209ENST00000583454 LRRIQ1Q96JM4 1722 aa40.44■■■■■ 4.06
TSEN54-209ENST00000583454 DENND4BO75064 1496 aaPredicted RBP40.44■■■■■ 4.06
TSEN54-209ENST00000583454 ARHGEF40Q8TER5 1519 aa40.43■■■■■ 4.06
TSEN54-209ENST00000583454 BCORL1Q5H9F3 1711 aa40.41■■■■■ 4.06
TSEN54-209ENST00000583454 ZMYM4Q5VZL5 1548 aa40.37■■■■■ 4.05
TSEN54-209ENST00000583454 KIF14Q15058 1648 aa40.33■■■■■ 4.05
TSEN54-209ENST00000583454 PLCH2O75038 1416 aa40.33■■■■■ 4.05
TSEN54-209ENST00000583454 MYO5CQ9NQX4 1742 aa40.32■■■■■ 4.05
TSEN54-209ENST00000583454 PTPRMP28827 1452 aa40.3■■■■■ 4.04
TSEN54-209ENST00000583454 MADDQ8WXG6 1647 aa40.29■■■■■ 4.04
TSEN54-209ENST00000583454 SIGLEC1Q9BZZ2 1709 aa40.28■■■■■ 4.04
TSEN54-209ENST00000583454 ATP1B4Q9UN42 357 aaPredicted RBP40.26■■■■■ 4.04
TSEN54-209ENST00000583454 TROQ12816 1431 aaPredicted RBP40.23■■■■■ 4.03
TSEN54-209ENST00000583454 ZFYVE16Q7Z3T8 1539 aa40.21■■■■■ 4.03
TSEN54-209ENST00000583454 POGZQ7Z3K3 1410 aa40.21■■■■■ 4.03
TSEN54-209ENST00000583454 YEATS2Q9ULM3 1422 aa40.21■■■■■ 4.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms