RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 CHD1O14646 1710 aa23.4■■□□□ 1.34
SENP3-208ENST00000583277 IQGAP2Q13576 1575 aa23.36■■□□□ 1.33
SENP3-208ENST00000583277 NUP160Q12769 1436 aa23.34■■□□□ 1.33
SENP3-208ENST00000583277 CEP170Q5SW79 1584 aa23.34■■□□□ 1.33
SENP3-208ENST00000583277 FBLN2P98095 1184 aa23.33■■□□□ 1.33
SENP3-208ENST00000583277 KIAA0586Q9BVV6 1533 aa23.32■■□□□ 1.32
SENP3-208ENST00000583277 EFCAB5A4FU69 1503 aa23.32■■□□□ 1.32
SENP3-208ENST00000583277 ARHGAP35Q9NRY4 1499 aa23.27■■□□□ 1.32
SENP3-208ENST00000583277 RANGAP1P46060 587 aaPredicted RBP23.25■■□□□ 1.31
SENP3-208ENST00000583277 SAMD9Q5K651 1589 aa23.24■■□□□ 1.31
SENP3-208ENST00000583277 UGGT2Q9NYU1 1516 aa23.23■■□□□ 1.31
SENP3-208ENST00000583277 ARAP1Q96P48 1450 aa23.22■■□□□ 1.31
SENP3-208ENST00000583277 VPS8Q8N3P4 1428 aa23.18■■□□□ 1.3
SENP3-208ENST00000583277 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
SENP3-208ENST00000583277 KIAA0556O60303 1618 aa23.11■■□□□ 1.29
SENP3-208ENST00000583277 SHROOM2Q13796 1616 aa23.1■■□□□ 1.29
SENP3-208ENST00000583277 FHOD3Q2V2M9 1422 aa23.1■■□□□ 1.29
SENP3-208ENST00000583277 DISP1Q96F81 1524 aa23.08■■□□□ 1.29
SENP3-208ENST00000583277 JPH4Q96JJ6 628 aa23.06■■□□□ 1.28
SENP3-208ENST00000583277 CARMIL2Q6F5E8 1435 aa23.06■■□□□ 1.28
SENP3-208ENST00000583277 FMN1Q68DA7 1419 aa23.05■■□□□ 1.28
SENP3-208ENST00000583277 P3H3Q8IVL6 736 aa23.03■■□□□ 1.28
SENP3-208ENST00000583277 PCF11O94913 1555 aaKnown RBP22.99■■□□□ 1.27
SENP3-208ENST00000583277 FYCO1Q9BQS8 1478 aa22.98■■□□□ 1.27
SENP3-208ENST00000583277 PRG4Q92954 1404 aaPredicted RBP22.98■■□□□ 1.27
SENP3-208ENST00000583277 OSCARQ8IYS5 282 aa22.96■■□□□ 1.27
SENP3-208ENST00000583277 CASKIN1Q8WXD9 1431 aa22.95■■□□□ 1.27
SENP3-208ENST00000583277 APLP2Q06481 763 aa22.9■■□□□ 1.26
SENP3-208ENST00000583277 DNAJC5Q9H3Z4 198 aa22.9■■□□□ 1.26
SENP3-208ENST00000583277 HECW1Q76N89 1606 aa22.89■■□□□ 1.25
SENP3-208ENST00000583277 MAP3K1Q13233 1512 aa22.88■■□□□ 1.25
SENP3-208ENST00000583277 CFAP43Q8NDM7 1665 aa22.87■■□□□ 1.25
SENP3-208ENST00000583277 RAPGEF6Q8TEU7 1601 aa22.85■■□□□ 1.25
SENP3-208ENST00000583277 ERCC6L2Q5T890 1561 aa22.84■■□□□ 1.25
SENP3-208ENST00000583277 TIAM1Q13009 1591 aa22.84■■□□□ 1.25
SENP3-208ENST00000583277 CCDC18Q5T9S5 1454 aa22.81■■□□□ 1.24
SENP3-208ENST00000583277 PTPRGP23470 1445 aa22.81■■□□□ 1.24
SENP3-208ENST00000583277 LRRIQ1Q96JM4 1722 aa22.8■■□□□ 1.24
SENP3-208ENST00000583277 ABCA8O94911 1581 aa22.79■■□□□ 1.24
SENP3-208ENST00000583277 ATP1B4Q9UN42 357 aaPredicted RBP22.76■■□□□ 1.23
SENP3-208ENST00000583277 PLB1Q6P1J6 1458 aa22.76■■□□□ 1.23
SENP3-208ENST00000583277 TTBK1Q5TCY1 1321 aaPredicted RBP22.75■■□□□ 1.23
SENP3-208ENST00000583277 NUP153P49790 1475 aaKnown RBP22.74■■□□□ 1.23
SENP3-208ENST00000583277 EPRSP07814 1512 aaKnown RBP22.74■■□□□ 1.23
SENP3-208ENST00000583277 LRRC9Q6ZRR7 1453 aa22.71■■□□□ 1.23
SENP3-208ENST00000583277 UACAQ9BZF9 1416 aa22.7■■□□□ 1.22
SENP3-208ENST00000583277 PPARGC1BQ86YN6 1023 aaKnown RBP22.68■■□□□ 1.22
SENP3-208ENST00000583277 ABCC2Q92887 1545 aa22.67■■□□□ 1.22
SENP3-208ENST00000583277 CDK13Q14004 1512 aaKnown RBP22.67■■□□□ 1.22
SENP3-208ENST00000583277 EHBP1L1Q8N3D4 1523 aa22.65■■□□□ 1.22
SENP3-208ENST00000583277 UHRF1BP1LA0JNW5 1464 aa22.64■■□□□ 1.22
SENP3-208ENST00000583277 KANK4Q5T7N3 995 aaPredicted RBP22.64■■□□□ 1.22
SENP3-208ENST00000583277 ARHGEF11O15085 1522 aa22.64■■□□□ 1.21
SENP3-208ENST00000583277 MTUS2Q5JR59 1369 aa22.62■■□□□ 1.21
SENP3-208ENST00000583277 TRIM26Q12899 539 aaPredicted RBP22.58■■□□□ 1.2
SENP3-208ENST00000583277 SUPT6HQ7KZ85 1726 aaKnown RBP22.58■■□□□ 1.2
SENP3-208ENST00000583277 ATP10BO94823 1461 aa22.57■■□□□ 1.2
SENP3-208ENST00000583277 CDK11AQ9UQ88 783 aaPredicted RBP22.57■■□□□ 1.2
SENP3-208ENST00000583277 MAGI3Q5TCQ9 1506 aa22.57■■□□□ 1.2
SENP3-208ENST00000583277 RIMBP3CA6NJZ7 1639 aa22.56■■□□□ 1.2
SENP3-208ENST00000583277 RIMBP3BA6NNM3 1639 aa22.56■■□□□ 1.2
SENP3-208ENST00000583277 ADCY10Q96PN6 1610 aa22.56■■□□□ 1.2
SENP3-208ENST00000583277 RIMBP3Q9UFD9 1639 aa22.56■■□□□ 1.2
SENP3-208ENST00000583277 ARID3CA6NKF2 412 aa22.55■■□□□ 1.2
SENP3-208ENST00000583277 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.53■■□□□ 1.2
SENP3-208ENST00000583277 HNRNPUL2Q1KMD3 747 aaKnown RBP22.53■■□□□ 1.2
SENP3-208ENST00000583277 KDM5BQ9UGL1 1544 aa22.52■■□□□ 1.2
SENP3-208ENST00000583277 ZCCHC11Q5TAX3 1644 aaKnown RBP22.52■■□□□ 1.2
SENP3-208ENST00000583277 TROQ12816 1431 aaPredicted RBP22.51■■□□□ 1.19
SENP3-208ENST00000583277 NCOA2Q15596 1464 aa22.48■■□□□ 1.19
SENP3-208ENST00000583277 KIF14Q15058 1648 aa22.45■■□□□ 1.18
SENP3-208ENST00000583277 PLEKHD1A6NEE1 506 aa22.44■■□□□ 1.18
SENP3-208ENST00000583277 RRBP1Q9P2E9 1410 aaKnown RBP22.42■■□□□ 1.18
SENP3-208ENST00000583277 PHLDB1Q86UU1 1377 aa22.42■■□□□ 1.18
SENP3-208ENST00000583277 PCGF6Q9BYE7 350 aa22.4■■□□□ 1.18
SENP3-208ENST00000583277 MYOM3Q5VTT5 1437 aa22.38■■□□□ 1.17
SENP3-208ENST00000583277 ITSN2Q9NZM3 1697 aa22.37■■□□□ 1.17
SENP3-208ENST00000583277 CCNB3Q8WWL7 1395 aa22.36■■□□□ 1.17
SENP3-208ENST00000583277 FGD6Q6ZV73 1430 aa22.35■■□□□ 1.17
SENP3-208ENST00000583277 NPM1P06748 294 aaKnown RBP eCLIP22.33■■□□□ 1.17
SENP3-208ENST00000583277 WDR7Q9Y4E6 1490 aa22.33■■□□□ 1.17
SENP3-208ENST00000583277 CYB5RLQ6IPT4 315 aa22.32■■□□□ 1.16
SENP3-208ENST00000583277 ABCC10Q5T3U5 1492 aa22.32■■□□□ 1.16
SENP3-208ENST00000583277 MIA2Q96PC5 1412 aa22.31■■□□□ 1.16
SENP3-208ENST00000583277 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.29■■□□□ 1.16
SENP3-208ENST00000583277 CDC42BPAQ5VT25 1732 aa22.29■■□□□ 1.16
SENP3-208ENST00000583277 PTPN23Q9H3S7 1636 aa22.28■■□□□ 1.16
SENP3-208ENST00000583277 ASXL2Q76L83 1435 aa22.28■■□□□ 1.16
SENP3-208ENST00000583277 MAPKBP1O60336 1514 aa22.26■■□□□ 1.15
SENP3-208ENST00000583277 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.26■■□□□ 1.15
SENP3-208ENST00000583277 GPATCH8Q9UKJ3 1502 aaKnown RBP22.26■■□□□ 1.15
SENP3-208ENST00000583277 TTC37Q6PGP7 1564 aa22.26■■□□□ 1.15
SENP3-208ENST00000583277 PREX2Q70Z35 1606 aa22.25■■□□□ 1.15
SENP3-208ENST00000583277 MYO5CQ9NQX4 1742 aa22.25■■□□□ 1.15
SENP3-208ENST00000583277 TCOF1Q13428 1488 aaKnown RBP22.25■■□□□ 1.15
SENP3-208ENST00000583277 ABCA9Q8IUA7 1624 aa22.21■■□□□ 1.15
SENP3-208ENST00000583277 FAM50AQ14320 339 aaKnown RBP22.2■■□□□ 1.14
SENP3-208ENST00000583277 CDC42BPBQ9Y5S2 1711 aa22.19■■□□□ 1.14
SENP3-208ENST00000583277 KCNH8Q96L42 1107 aa22.18■■□□□ 1.14
SENP3-208ENST00000583277 CFDP1Q9UEE9 299 aaPredicted RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms