RNA–Protein interactions for RNA: ENST00000582980.1

CDH8-208, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 376 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-208ENST00000582980 OSCARQ8IYS5 282 aa20.12■□□□□ 0.81
CDH8-208ENST00000582980 KIAA0586Q9BVV6 1533 aa20.11■□□□□ 0.81
CDH8-208ENST00000582980 IQGAP2Q13576 1575 aa20.08■□□□□ 0.81
CDH8-208ENST00000582980 CLASP1Q7Z460 1538 aa20.08■□□□□ 0.81
CDH8-208ENST00000582980 LOC105371045A0A1W2PR82 267 aa20.08■□□□□ 0.81
CDH8-208ENST00000582980 TNIKQ9UKE5 1360 aa20.07■□□□□ 0.8
CDH8-208ENST00000582980 SHROOM2Q13796 1616 aa19.99■□□□□ 0.79
CDH8-208ENST00000582980 UGGT2Q9NYU1 1516 aa19.98■□□□□ 0.79
CDH8-208ENST00000582980 JPH4Q96JJ6 628 aa19.97■□□□□ 0.79
CDH8-208ENST00000582980 EFCAB5A4FU69 1503 aa19.93■□□□□ 0.78
CDH8-208ENST00000582980 CEP162Q5TB80 1403 aa19.92■□□□□ 0.78
CDH8-208ENST00000582980 RANGAP1P46060 587 aaPredicted RBP19.91■□□□□ 0.78
CDH8-208ENST00000582980 CARMIL2Q6F5E8 1435 aa19.91■□□□□ 0.78
CDH8-208ENST00000582980 CLIP1P30622 1438 aa19.9■□□□□ 0.78
CDH8-208ENST00000582980 PRG4Q92954 1404 aaPredicted RBP19.9■□□□□ 0.78
CDH8-208ENST00000582980 SAMD9Q5K651 1589 aa19.9■□□□□ 0.78
CDH8-208ENST00000582980 KIAA0556O60303 1618 aa19.88■□□□□ 0.77
CDH8-208ENST00000582980 DISP1Q96F81 1524 aa19.87■□□□□ 0.77
CDH8-208ENST00000582980 ARHGAP35Q9NRY4 1499 aa19.85■□□□□ 0.77
CDH8-208ENST00000582980 ERCC6L2Q5T890 1561 aa19.81■□□□□ 0.76
CDH8-208ENST00000582980 ARHGEF11O15085 1522 aa19.8■□□□□ 0.76
CDH8-208ENST00000582980 P3H3Q8IVL6 736 aa19.78■□□□□ 0.76
CDH8-208ENST00000582980 FHOD3Q2V2M9 1422 aa19.77■□□□□ 0.76
CDH8-208ENST00000582980 RIMBP3CA6NJZ7 1639 aa19.76■□□□□ 0.75
CDH8-208ENST00000582980 RIMBP3BA6NNM3 1639 aa19.76■□□□□ 0.75
CDH8-208ENST00000582980 RIMBP3Q9UFD9 1639 aa19.76■□□□□ 0.75
CDH8-208ENST00000582980 ARAP1Q96P48 1450 aa19.75■□□□□ 0.75
CDH8-208ENST00000582980 PTPRGP23470 1445 aa19.73■□□□□ 0.75
CDH8-208ENST00000582980 FMN1Q68DA7 1419 aa19.73■□□□□ 0.75
CDH8-208ENST00000582980 DNAJC5Q9H3Z4 198 aa19.68■□□□□ 0.74
CDH8-208ENST00000582980 TTBK1Q5TCY1 1321 aaPredicted RBP19.68■□□□□ 0.74
CDH8-208ENST00000582980 VPS8Q8N3P4 1428 aa19.66■□□□□ 0.74
CDH8-208ENST00000582980 RAPGEF6Q8TEU7 1601 aa19.63■□□□□ 0.73
CDH8-208ENST00000582980 ABCA8O94911 1581 aa19.62■□□□□ 0.73
CDH8-208ENST00000582980 PCF11O94913 1555 aaKnown RBP19.61■□□□□ 0.73
CDH8-208ENST00000582980 PLB1Q6P1J6 1458 aa19.61■□□□□ 0.73
CDH8-208ENST00000582980 UACAQ9BZF9 1416 aa19.61■□□□□ 0.73
CDH8-208ENST00000582980 FYCO1Q9BQS8 1478 aa19.6■□□□□ 0.73
CDH8-208ENST00000582980 HECW1Q76N89 1606 aa19.6■□□□□ 0.73
CDH8-208ENST00000582980 CASKIN1Q8WXD9 1431 aa19.59■□□□□ 0.73
CDH8-208ENST00000582980 ABCC2Q92887 1545 aa19.59■□□□□ 0.73
CDH8-208ENST00000582980 UHRF1BP1LA0JNW5 1464 aa19.58■□□□□ 0.72
CDH8-208ENST00000582980 CYB5RLQ6IPT4 315 aa19.56■□□□□ 0.72
CDH8-208ENST00000582980 ADCY10Q96PN6 1610 aa19.54■□□□□ 0.72
CDH8-208ENST00000582980 ATP1B4Q9UN42 357 aaPredicted RBP19.53■□□□□ 0.72
CDH8-208ENST00000582980 NUP153P49790 1475 aaKnown RBP19.53■□□□□ 0.72
CDH8-208ENST00000582980 CCDC18Q5T9S5 1454 aa19.51■□□□□ 0.71
CDH8-208ENST00000582980 EPRSP07814 1512 aaKnown RBP19.49■□□□□ 0.71
CDH8-208ENST00000582980 KDM5BQ9UGL1 1544 aa19.47■□□□□ 0.71
CDH8-208ENST00000582980 LRRIQ1Q96JM4 1722 aa19.47■□□□□ 0.71
CDH8-208ENST00000582980 NPM1P06748 294 aaKnown RBP eCLIP19.46■□□□□ 0.71
CDH8-208ENST00000582980 APLP2Q06481 763 aa19.46■□□□□ 0.71
CDH8-208ENST00000582980 ZCCHC11Q5TAX3 1644 aaKnown RBP19.46■□□□□ 0.71
CDH8-208ENST00000582980 CFAP43Q8NDM7 1665 aa19.44■□□□□ 0.7
CDH8-208ENST00000582980 ATP10BO94823 1461 aa19.44■□□□□ 0.7
CDH8-208ENST00000582980 MAP3K1Q13233 1512 aa19.44■□□□□ 0.7
CDH8-208ENST00000582980 CDK13Q14004 1512 aaKnown RBP19.44■□□□□ 0.7
CDH8-208ENST00000582980 ARID3CA6NKF2 412 aa19.43■□□□□ 0.7
CDH8-208ENST00000582980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.43■□□□□ 0.7
CDH8-208ENST00000582980 HNRNPUL2Q1KMD3 747 aaKnown RBP19.43■□□□□ 0.7
CDH8-208ENST00000582980 TIAM1Q13009 1591 aa19.42■□□□□ 0.7
CDH8-208ENST00000582980 CDK11AQ9UQ88 783 aaPredicted RBP19.4■□□□□ 0.7
CDH8-208ENST00000582980 MAPKBP1O60336 1514 aa19.35■□□□□ 0.69
CDH8-208ENST00000582980 PLEKHD1A6NEE1 506 aa19.34■□□□□ 0.69
CDH8-208ENST00000582980 MTUS2Q5JR59 1369 aa19.33■□□□□ 0.69
CDH8-208ENST00000582980 EHBP1L1Q8N3D4 1523 aa19.33■□□□□ 0.68
CDH8-208ENST00000582980 LRRC9Q6ZRR7 1453 aa19.32■□□□□ 0.68
CDH8-208ENST00000582980 WDR7Q9Y4E6 1490 aa19.32■□□□□ 0.68
CDH8-208ENST00000582980 ASXL2Q76L83 1435 aa19.32■□□□□ 0.68
CDH8-208ENST00000582980 TROQ12816 1431 aaPredicted RBP19.31■□□□□ 0.68
CDH8-208ENST00000582980 MAGI3Q5TCQ9 1506 aa19.3■□□□□ 0.68
CDH8-208ENST00000582980 KIF14Q15058 1648 aa19.27■□□□□ 0.68
CDH8-208ENST00000582980 SUPT6HQ7KZ85 1726 aaKnown RBP19.25■□□□□ 0.67
CDH8-208ENST00000582980 KANK4Q5T7N3 995 aaPredicted RBP19.25■□□□□ 0.67
CDH8-208ENST00000582980 KCNH8Q96L42 1107 aa19.2■□□□□ 0.66
CDH8-208ENST00000582980 NCOA2Q15596 1464 aa19.18■□□□□ 0.66
CDH8-208ENST00000582980 ABCC10Q5T3U5 1492 aa19.18■□□□□ 0.66
CDH8-208ENST00000582980 DIP2BQ9P265 1576 aa19.18■□□□□ 0.66
CDH8-208ENST00000582980 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.17■□□□□ 0.66
CDH8-208ENST00000582980 PPARGC1BQ86YN6 1023 aaKnown RBP19.17■□□□□ 0.66
CDH8-208ENST00000582980 GLI2P10070 1586 aa19.17■□□□□ 0.66
CDH8-208ENST00000582980 ABCA9Q8IUA7 1624 aa19.17■□□□□ 0.66
CDH8-208ENST00000582980 TTC37Q6PGP7 1564 aa19.15■□□□□ 0.66
CDH8-208ENST00000582980 CCNB3Q8WWL7 1395 aa19.13■□□□□ 0.65
CDH8-208ENST00000582980 ITSN2Q9NZM3 1697 aa19.13■□□□□ 0.65
CDH8-208ENST00000582980 MYO5CQ9NQX4 1742 aa19.13■□□□□ 0.65
CDH8-208ENST00000582980 KIF13AQ9H1H9 1805 aa19.11■□□□□ 0.65
CDH8-208ENST00000582980 FAM69CQ0P6D2 419 aa19.11■□□□□ 0.65
CDH8-208ENST00000582980 CDC42BPAQ5VT25 1732 aa19.1■□□□□ 0.65
CDH8-208ENST00000582980 MAP3K4Q9Y6R4 1608 aa19.1■□□□□ 0.65
CDH8-208ENST00000582980 PREX2Q70Z35 1606 aa19.09■□□□□ 0.65
CDH8-208ENST00000582980 GPATCH8Q9UKJ3 1502 aaKnown RBP19.08■□□□□ 0.64
CDH8-208ENST00000582980 MYOM3Q5VTT5 1437 aa19.08■□□□□ 0.64
CDH8-208ENST00000582980 CD109Q6YHK3 1445 aa19.08■□□□□ 0.64
CDH8-208ENST00000582980 PHLDB1Q86UU1 1377 aa19.07■□□□□ 0.64
CDH8-208ENST00000582980 ARAP3Q8WWN8 1544 aa19.07■□□□□ 0.64
CDH8-208ENST00000582980 PLCH2O75038 1416 aa19.06■□□□□ 0.64
CDH8-208ENST00000582980 ARHGAP5Q13017 1502 aa19.05■□□□□ 0.64
CDH8-208ENST00000582980 TRHP20396 242 aaPredicted RBP19.04■□□□□ 0.64
CDH8-208ENST00000582980 MIA2Q96PC5 1412 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms