RNA–Protein interactions for RNA: ENST00000582933.5

PPP4R1-223, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-223ENST00000582933 CLASP1Q7Z460 1538 aa10.11□□□□□ -0.79
PPP4R1-223ENST00000582933 FBLN2P98095 1184 aa10.09□□□□□ -0.79
PPP4R1-223ENST00000582933 APLP2Q06481 763 aa10.09□□□□□ -0.79
PPP4R1-223ENST00000582933 CHMP7Q8WUX9 453 aaPredicted RBP10.09□□□□□ -0.79
PPP4R1-223ENST00000582933 CUL7Q14999 1698 aa10.09□□□□□ -0.79
PPP4R1-223ENST00000582933 NUP160Q12769 1436 aa10.08□□□□□ -0.8
PPP4R1-223ENST00000582933 TRIM41Q8WV44 630 aa10.08□□□□□ -0.8
PPP4R1-223ENST00000582933 IGF1RP08069 1367 aa10.08□□□□□ -0.8
PPP4R1-223ENST00000582933 CEP170Q5SW79 1584 aa10.06□□□□□ -0.8
PPP4R1-223ENST00000582933 DAXXQ9UER7 740 aaPredicted RBP10.06□□□□□ -0.8
PPP4R1-223ENST00000582933 ARHGEF11O15085 1522 aa10.04□□□□□ -0.8
PPP4R1-223ENST00000582933 PRKCSHP14314 528 aaPredicted RBP10.04□□□□□ -0.8
PPP4R1-223ENST00000582933 RUSC2Q8N2Y8 1516 aa10.03□□□□□ -0.8
PPP4R1-223ENST00000582933 CARMIL1Q5VZK9 1371 aa10.01□□□□□ -0.81
PPP4R1-223ENST00000582933 RIMBP3CA6NJZ7 1639 aa10.01□□□□□ -0.81
PPP4R1-223ENST00000582933 RIMBP3BA6NNM3 1639 aa10.01□□□□□ -0.81
PPP4R1-223ENST00000582933 RIMBP3Q9UFD9 1639 aa10.01□□□□□ -0.81
PPP4R1-223ENST00000582933 EEA1Q15075 1411 aa10□□□□□ -0.81
PPP4R1-223ENST00000582933 SHROOM2Q13796 1616 aa10□□□□□ -0.81
PPP4R1-223ENST00000582933 PRXQ9BXM0 1461 aa9.98□□□□□ -0.81
PPP4R1-223ENST00000582933 RAPGEF2Q9Y4G8 1499 aa9.98□□□□□ -0.81
PPP4R1-223ENST00000582933 KIAA0586Q9BVV6 1533 aa9.97□□□□□ -0.81
PPP4R1-223ENST00000582933 ARAP1Q96P48 1450 aa9.97□□□□□ -0.81
PPP4R1-223ENST00000582933 IQGAP2Q13576 1575 aa9.93□□□□□ -0.82
PPP4R1-223ENST00000582933 ERCC6L2Q5T890 1561 aa9.93□□□□□ -0.82
PPP4R1-223ENST00000582933 PRG4Q92954 1404 aaPredicted RBP9.91□□□□□ -0.82
PPP4R1-223ENST00000582933 CSRNP3Q8WYN3 585 aa9.9□□□□□ -0.82
PPP4R1-223ENST00000582933 KIF21BO75037 1637 aa9.89□□□□□ -0.83
PPP4R1-223ENST00000582933 UGGT2Q9NYU1 1516 aa9.89□□□□□ -0.83
PPP4R1-223ENST00000582933 JPH4Q96JJ6 628 aa9.88□□□□□ -0.83
PPP4R1-223ENST00000582933 CTTNBP2Q8WZ74 1663 aa9.87□□□□□ -0.83
PPP4R1-223ENST00000582933 CYB5RLQ6IPT4 315 aa9.86□□□□□ -0.83
PPP4R1-223ENST00000582933 DISP1Q96F81 1524 aa9.86□□□□□ -0.83
PPP4R1-223ENST00000582933 CARMIL2Q6F5E8 1435 aa9.85□□□□□ -0.83
PPP4R1-223ENST00000582933 FAM9AQ8IZU1 332 aaPredicted RBP9.84□□□□□ -0.83
PPP4R1-223ENST00000582933 KIAA0556O60303 1618 aa9.84□□□□□ -0.83
PPP4R1-223ENST00000582933 GOLGA3Q08378 1498 aa9.83□□□□□ -0.84
PPP4R1-223ENST00000582933 TNIKQ9UKE5 1360 aa9.82□□□□□ -0.84
PPP4R1-223ENST00000582933 KCNA4P22459 653 aa9.81□□□□□ -0.84
PPP4R1-223ENST00000582933 SAMD9Q5K651 1589 aa9.8□□□□□ -0.84
PPP4R1-223ENST00000582933 PTPRGP23470 1445 aa9.79□□□□□ -0.84
PPP4R1-223ENST00000582933 ADCY10Q96PN6 1610 aa9.78□□□□□ -0.84
PPP4R1-223ENST00000582933 EFCAB5A4FU69 1503 aa9.77□□□□□ -0.84
PPP4R1-223ENST00000582933 UHRF1BP1LA0JNW5 1464 aa9.77□□□□□ -0.85
PPP4R1-223ENST00000582933 ABCC2Q92887 1545 aa9.76□□□□□ -0.85
PPP4R1-223ENST00000582933 UACAQ9BZF9 1416 aa9.74□□□□□ -0.85
PPP4R1-223ENST00000582933 DMRT2Q9Y5R5 561 aa9.74□□□□□ -0.85
PPP4R1-223ENST00000582933 MAPKBP1O60336 1514 aa9.73□□□□□ -0.85
PPP4R1-223ENST00000582933 PLB1Q6P1J6 1458 aa9.72□□□□□ -0.85
PPP4R1-223ENST00000582933 ABCA8O94911 1581 aa9.72□□□□□ -0.85
PPP4R1-223ENST00000582933 RNF39Q9H2S5 420 aa9.72□□□□□ -0.85
PPP4R1-223ENST00000582933 UBTFP17480 764 aaKnown RBP9.71□□□□□ -0.86
PPP4R1-223ENST00000582933 FHOD3Q2V2M9 1422 aa9.71□□□□□ -0.86
PPP4R1-223ENST00000582933 KDM5BQ9UGL1 1544 aa9.71□□□□□ -0.86
PPP4R1-223ENST00000582933 ARHGAP35Q9NRY4 1499 aa9.7□□□□□ -0.86
PPP4R1-223ENST00000582933 PPP4R3CPQ6ZMV5 832 aa9.69□□□□□ -0.86
PPP4R1-223ENST00000582933 EHMT2Q96KQ7 1210 aa9.68□□□□□ -0.86
PPP4R1-223ENST00000582933 ZCCHC11Q5TAX3 1644 aaKnown RBP9.67□□□□□ -0.86
PPP4R1-223ENST00000582933 ABCC10Q5T3U5 1492 aa9.66□□□□□ -0.86
PPP4R1-223ENST00000582933 NPM1P06748 294 aaKnown RBP eCLIP9.66□□□□□ -0.86
PPP4R1-223ENST00000582933 P3H3Q8IVL6 736 aa9.66□□□□□ -0.86
PPP4R1-223ENST00000582933 RAPGEF6Q8TEU7 1601 aa9.66□□□□□ -0.86
PPP4R1-223ENST00000582933 DIP2BQ9P265 1576 aa9.66□□□□□ -0.86
PPP4R1-223ENST00000582933 NUP153P49790 1475 aaKnown RBP9.66□□□□□ -0.86
PPP4R1-223ENST00000582933 FMN1Q68DA7 1419 aa9.65□□□□□ -0.86
PPP4R1-223ENST00000582933 ASXL2Q76L83 1435 aa9.65□□□□□ -0.86
PPP4R1-223ENST00000582933 RANGAP1P46060 587 aaPredicted RBP9.65□□□□□ -0.86
PPP4R1-223ENST00000582933 CLIP1P30622 1438 aa9.65□□□□□ -0.87
PPP4R1-223ENST00000582933 WDR7Q9Y4E6 1490 aa9.64□□□□□ -0.87
PPP4R1-223ENST00000582933 TRHP20396 242 aaPredicted RBP9.63□□□□□ -0.87
PPP4R1-223ENST00000582933 CEP162Q5TB80 1403 aa9.62□□□□□ -0.87
PPP4R1-223ENST00000582933 ATP10BO94823 1461 aa9.61□□□□□ -0.87
PPP4R1-223ENST00000582933 HECW1Q76N89 1606 aa9.61□□□□□ -0.87
PPP4R1-223ENST00000582933 GLI2P10070 1586 aa9.61□□□□□ -0.87
PPP4R1-223ENST00000582933 EPRSP07814 1512 aaKnown RBP9.61□□□□□ -0.87
PPP4R1-223ENST00000582933 PCF11O94913 1555 aaKnown RBP9.6□□□□□ -0.87
PPP4R1-223ENST00000582933 KIF13AQ9H1H9 1805 aa9.6□□□□□ -0.87
PPP4R1-223ENST00000582933 FYCO1Q9BQS8 1478 aa9.59□□□□□ -0.87
PPP4R1-223ENST00000582933 CASKIN1Q8WXD9 1431 aa9.58□□□□□ -0.88
PPP4R1-223ENST00000582933 MAPK8IP2Q13387 824 aaPredicted RBP9.58□□□□□ -0.88
PPP4R1-223ENST00000582933 CDK13Q14004 1512 aaKnown RBP9.57□□□□□ -0.88
PPP4R1-223ENST00000582933 FAM69CQ0P6D2 419 aa9.57□□□□□ -0.88
PPP4R1-223ENST00000582933 ARID3CA6NKF2 412 aa9.56□□□□□ -0.88
PPP4R1-223ENST00000582933 MAP3K4Q9Y6R4 1608 aa9.56□□□□□ -0.88
PPP4R1-223ENST00000582933 CCDC18Q5T9S5 1454 aa9.55□□□□□ -0.88
PPP4R1-223ENST00000582933 LOC105371045A0A1W2PR82 267 aa9.54□□□□□ -0.88
PPP4R1-223ENST00000582933 NCBP3Q53F19 620 aaKnown RBP9.53□□□□□ -0.88
PPP4R1-223ENST00000582933 ABCA9Q8IUA7 1624 aa9.53□□□□□ -0.88
PPP4R1-223ENST00000582933 PPRC1Q5VV67 1664 aaKnown RBP9.52□□□□□ -0.89
PPP4R1-223ENST00000582933 CFAP43Q8NDM7 1665 aa9.52□□□□□ -0.89
PPP4R1-223ENST00000582933 C1QBPQ07021 282 aaKnown RBP9.52□□□□□ -0.89
PPP4R1-223ENST00000582933 TEX14Q8IWB6 1497 aa9.52□□□□□ -0.89
PPP4R1-223ENST00000582933 MAGI3Q5TCQ9 1506 aa9.51□□□□□ -0.89
PPP4R1-223ENST00000582933 LRRIQ1Q96JM4 1722 aa9.51□□□□□ -0.89
PPP4R1-223ENST00000582933 TROQ12816 1431 aaPredicted RBP9.5□□□□□ -0.89
PPP4R1-223ENST00000582933 CD109Q6YHK3 1445 aa9.5□□□□□ -0.89
PPP4R1-223ENST00000582933 VPS8Q8N3P4 1428 aa9.5□□□□□ -0.89
PPP4R1-223ENST00000582933 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.5□□□□□ -0.89
PPP4R1-223ENST00000582933 HNRNPUL2Q1KMD3 747 aaKnown RBP9.5□□□□□ -0.89
PPP4R1-223ENST00000582933 BCL11AQ9H165 835 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms