RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 EHMT2Q96KQ7 1210 aa19.42■□□□□ 0.7
CCDC57-216ENST00000582885 FBLN2P98095 1184 aa19.39■□□□□ 0.69
CCDC57-216ENST00000582885 IQGAP2Q13576 1575 aa19.38■□□□□ 0.69
CCDC57-216ENST00000582885 KIAA0586Q9BVV6 1533 aa19.38■□□□□ 0.69
CCDC57-216ENST00000582885 CEP162Q5TB80 1403 aa19.32■□□□□ 0.68
CCDC57-216ENST00000582885 CLASP1Q7Z460 1538 aa19.3■□□□□ 0.68
CCDC57-216ENST00000582885 EFCAB5A4FU69 1503 aa19.29■□□□□ 0.68
CCDC57-216ENST00000582885 UGGT2Q9NYU1 1516 aa19.29■□□□□ 0.68
CCDC57-216ENST00000582885 SHROOM2Q13796 1616 aa19.29■□□□□ 0.68
CCDC57-216ENST00000582885 SAMD9Q5K651 1589 aa19.27■□□□□ 0.68
CCDC57-216ENST00000582885 CLIP1P30622 1438 aa19.26■□□□□ 0.67
CCDC57-216ENST00000582885 OSCARQ8IYS5 282 aa19.22■□□□□ 0.67
CCDC57-216ENST00000582885 ARHGAP35Q9NRY4 1499 aa19.22■□□□□ 0.67
CCDC57-216ENST00000582885 JPH4Q96JJ6 628 aa19.19■□□□□ 0.66
CCDC57-216ENST00000582885 KIAA0556O60303 1618 aa19.18■□□□□ 0.66
CCDC57-216ENST00000582885 DISP1Q96F81 1524 aa19.17■□□□□ 0.66
CCDC57-216ENST00000582885 ARAP1Q96P48 1450 aa19.15■□□□□ 0.66
CCDC57-216ENST00000582885 RANGAP1P46060 587 aaPredicted RBP19.14■□□□□ 0.65
CCDC57-216ENST00000582885 AEBP2Q6ZN18 517 aaPredicted RBP19.14■□□□□ 0.65
CCDC57-216ENST00000582885 CARMIL2Q6F5E8 1435 aa19.14■□□□□ 0.65
CCDC57-216ENST00000582885 PRG4Q92954 1404 aaPredicted RBP19.11■□□□□ 0.65
CCDC57-216ENST00000582885 FHOD3Q2V2M9 1422 aa19.08■□□□□ 0.64
CCDC57-216ENST00000582885 VPS8Q8N3P4 1428 aa19.07■□□□□ 0.64
CCDC57-216ENST00000582885 FMN1Q68DA7 1419 aa19.06■□□□□ 0.64
CCDC57-216ENST00000582885 ERCC6L2Q5T890 1561 aa19.04■□□□□ 0.64
CCDC57-216ENST00000582885 P3H3Q8IVL6 736 aa19.03■□□□□ 0.64
CCDC57-216ENST00000582885 PCF11O94913 1555 aaKnown RBP18.98■□□□□ 0.63
CCDC57-216ENST00000582885 FYCO1Q9BQS8 1478 aa18.97■□□□□ 0.63
CCDC57-216ENST00000582885 CASKIN1Q8WXD9 1431 aa18.97■□□□□ 0.63
CCDC57-216ENST00000582885 RAPGEF6Q8TEU7 1601 aa18.96■□□□□ 0.63
CCDC57-216ENST00000582885 PTPRGP23470 1445 aa18.95■□□□□ 0.62
CCDC57-216ENST00000582885 ABCA8O94911 1581 aa18.94■□□□□ 0.62
CCDC57-216ENST00000582885 HECW1Q76N89 1606 aa18.94■□□□□ 0.62
CCDC57-216ENST00000582885 ARHGEF11O15085 1522 aa18.94■□□□□ 0.62
CCDC57-216ENST00000582885 LRRIQ1Q96JM4 1722 aa18.94■□□□□ 0.62
CCDC57-216ENST00000582885 RIMBP3CA6NJZ7 1639 aa18.92■□□□□ 0.62
CCDC57-216ENST00000582885 RIMBP3BA6NNM3 1639 aa18.92■□□□□ 0.62
CCDC57-216ENST00000582885 RIMBP3Q9UFD9 1639 aa18.92■□□□□ 0.62
CCDC57-216ENST00000582885 MAP3K1Q13233 1512 aa18.9■□□□□ 0.62
CCDC57-216ENST00000582885 CFAP43Q8NDM7 1665 aa18.89■□□□□ 0.61
CCDC57-216ENST00000582885 PLB1Q6P1J6 1458 aa18.88■□□□□ 0.61
CCDC57-216ENST00000582885 UHRF1BP1LA0JNW5 1464 aa18.86■□□□□ 0.61
CCDC57-216ENST00000582885 UACAQ9BZF9 1416 aa18.86■□□□□ 0.61
CCDC57-216ENST00000582885 ABCC2Q92887 1545 aa18.85■□□□□ 0.61
CCDC57-216ENST00000582885 CCDC18Q5T9S5 1454 aa18.85■□□□□ 0.61
CCDC57-216ENST00000582885 TIAM1Q13009 1591 aa18.85■□□□□ 0.61
CCDC57-216ENST00000582885 NUP153P49790 1475 aaKnown RBP18.84■□□□□ 0.61
CCDC57-216ENST00000582885 EPRSP07814 1512 aaKnown RBP18.83■□□□□ 0.6
CCDC57-216ENST00000582885 TTBK1Q5TCY1 1321 aaPredicted RBP18.82■□□□□ 0.6
CCDC57-216ENST00000582885 ADCY10Q96PN6 1610 aa18.81■□□□□ 0.6
CCDC57-216ENST00000582885 APLP2Q06481 763 aa18.8■□□□□ 0.6
CCDC57-216ENST00000582885 ATP1B4Q9UN42 357 aaPredicted RBP18.77■□□□□ 0.6
CCDC57-216ENST00000582885 KDM5BQ9UGL1 1544 aa18.76■□□□□ 0.59
CCDC57-216ENST00000582885 ATP10BO94823 1461 aa18.76■□□□□ 0.59
CCDC57-216ENST00000582885 CDK13Q14004 1512 aaKnown RBP18.75■□□□□ 0.59
CCDC57-216ENST00000582885 ZCCHC11Q5TAX3 1644 aaKnown RBP18.75■□□□□ 0.59
CCDC57-216ENST00000582885 LRRC9Q6ZRR7 1453 aa18.72■□□□□ 0.59
CCDC57-216ENST00000582885 EHBP1L1Q8N3D4 1523 aa18.7■□□□□ 0.58
CCDC57-216ENST00000582885 CDK11AQ9UQ88 783 aaPredicted RBP18.68■□□□□ 0.58
CCDC57-216ENST00000582885 MAGI3Q5TCQ9 1506 aa18.68■□□□□ 0.58
CCDC57-216ENST00000582885 SUPT6HQ7KZ85 1726 aaKnown RBP18.67■□□□□ 0.58
CCDC57-216ENST00000582885 KANK4Q5T7N3 995 aaPredicted RBP18.66■□□□□ 0.58
CCDC57-216ENST00000582885 CYB5RLQ6IPT4 315 aa18.66■□□□□ 0.58
CCDC57-216ENST00000582885 DNAJC5Q9H3Z4 198 aa18.66■□□□□ 0.58
CCDC57-216ENST00000582885 MTUS2Q5JR59 1369 aa18.65■□□□□ 0.58
CCDC57-216ENST00000582885 TROQ12816 1431 aaPredicted RBP18.64■□□□□ 0.57
CCDC57-216ENST00000582885 ARID3CA6NKF2 412 aa18.62■□□□□ 0.57
CCDC57-216ENST00000582885 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.62■□□□□ 0.57
CCDC57-216ENST00000582885 HNRNPUL2Q1KMD3 747 aaKnown RBP18.62■□□□□ 0.57
CCDC57-216ENST00000582885 PLEKHD1A6NEE1 506 aa18.61■□□□□ 0.57
CCDC57-216ENST00000582885 NPM1P06748 294 aaKnown RBP eCLIP18.61■□□□□ 0.57
CCDC57-216ENST00000582885 KIF14Q15058 1648 aa18.6■□□□□ 0.57
CCDC57-216ENST00000582885 MAPKBP1O60336 1514 aa18.59■□□□□ 0.57
CCDC57-216ENST00000582885 PPARGC1BQ86YN6 1023 aaKnown RBP18.57■□□□□ 0.56
CCDC57-216ENST00000582885 NCOA2Q15596 1464 aa18.56■□□□□ 0.56
CCDC57-216ENST00000582885 WDR7Q9Y4E6 1490 aa18.56■□□□□ 0.56
CCDC57-216ENST00000582885 ASXL2Q76L83 1435 aa18.54■□□□□ 0.56
CCDC57-216ENST00000582885 ITSN2Q9NZM3 1697 aa18.54■□□□□ 0.56
CCDC57-216ENST00000582885 CDC42BPAQ5VT25 1732 aa18.52■□□□□ 0.56
CCDC57-216ENST00000582885 ABCC10Q5T3U5 1492 aa18.51■□□□□ 0.55
CCDC57-216ENST00000582885 MYO5CQ9NQX4 1742 aa18.5■□□□□ 0.55
CCDC57-216ENST00000582885 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.49■□□□□ 0.55
CCDC57-216ENST00000582885 ABCA9Q8IUA7 1624 aa18.49■□□□□ 0.55
CCDC57-216ENST00000582885 TTC37Q6PGP7 1564 aa18.47■□□□□ 0.55
CCDC57-216ENST00000582885 PHLDB1Q86UU1 1377 aa18.47■□□□□ 0.55
CCDC57-216ENST00000582885 MYOM3Q5VTT5 1437 aa18.47■□□□□ 0.55
CCDC57-216ENST00000582885 CDC42BPBQ9Y5S2 1711 aa18.46■□□□□ 0.55
CCDC57-216ENST00000582885 PREX2Q70Z35 1606 aa18.46■□□□□ 0.55
CCDC57-216ENST00000582885 CCNB3Q8WWL7 1395 aa18.44■□□□□ 0.54
CCDC57-216ENST00000582885 GLI2P10070 1586 aa18.44■□□□□ 0.54
CCDC57-216ENST00000582885 MIA2Q96PC5 1412 aa18.44■□□□□ 0.54
CCDC57-216ENST00000582885 RRBP1Q9P2E9 1410 aaKnown RBP18.44■□□□□ 0.54
CCDC57-216ENST00000582885 GPATCH8Q9UKJ3 1502 aaKnown RBP18.44■□□□□ 0.54
CCDC57-216ENST00000582885 ARAP3Q8WWN8 1544 aa18.43■□□□□ 0.54
CCDC57-216ENST00000582885 KCNH8Q96L42 1107 aa18.42■□□□□ 0.54
CCDC57-216ENST00000582885 KIF13AQ9H1H9 1805 aa18.42■□□□□ 0.54
CCDC57-216ENST00000582885 FGD6Q6ZV73 1430 aa18.41■□□□□ 0.54
CCDC57-216ENST00000582885 TRIM26Q12899 539 aaPredicted RBP18.41■□□□□ 0.54
CCDC57-216ENST00000582885 DIP2BQ9P265 1576 aa18.41■□□□□ 0.54
CCDC57-216ENST00000582885 PTPN23Q9H3S7 1636 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms