RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 CTTNBP2Q8WZ74 1663 aa26.38■■□□□ 1.81
ERBB2-212ENST00000582788 PELP1Q8IZL8 1130 aaKnown RBP26.36■■□□□ 1.81
ERBB2-212ENST00000582788 GRIN2BQ13224 1484 aa26.35■■□□□ 1.81
ERBB2-212ENST00000582788 ADAMTS12P58397 1594 aa26.32■■□□□ 1.8
ERBB2-212ENST00000582788 FHAD1B1AJZ9 1412 aa26.31■■□□□ 1.8
ERBB2-212ENST00000582788 APLP2Q06481 763 aa26.31■■□□□ 1.8
ERBB2-212ENST00000582788 EIF4G3O43432 1585 aaKnown RBP26.29■■□□□ 1.8
ERBB2-212ENST00000582788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.28■■□□□ 1.8
ERBB2-212ENST00000582788 EFCAB5A4FU69 1503 aa26.23■■□□□ 1.79
ERBB2-212ENST00000582788 CCER1Q8TC90 406 aaPredicted RBP26.23■■□□□ 1.79
ERBB2-212ENST00000582788 P3H3Q8IVL6 736 aa26.21■■□□□ 1.79
ERBB2-212ENST00000582788 SNAPC4Q5SXM2 1469 aa26.19■■□□□ 1.78
ERBB2-212ENST00000582788 FHOD3Q2V2M9 1422 aa26.17■■□□□ 1.78
ERBB2-212ENST00000582788 SAMD9Q5K651 1589 aa26.13■■□□□ 1.77
ERBB2-212ENST00000582788 KANK4Q5T7N3 995 aaPredicted RBP26.13■■□□□ 1.77
ERBB2-212ENST00000582788 PCF11O94913 1555 aaKnown RBP26.09■■□□□ 1.77
ERBB2-212ENST00000582788 MAGI1Q96QZ7 1491 aaPredicted RBP26.09■■□□□ 1.77
ERBB2-212ENST00000582788 IQGAP2Q13576 1575 aa26.07■■□□□ 1.76
ERBB2-212ENST00000582788 SCAF1Q9H7N4 1312 aaKnown RBP26.07■■□□□ 1.76
ERBB2-212ENST00000582788 GRIN2AQ12879 1464 aa26.06■■□□□ 1.76
ERBB2-212ENST00000582788 MAP3K1Q13233 1512 aa26.05■■□□□ 1.76
ERBB2-212ENST00000582788 TIAM1Q13009 1591 aa26.05■■□□□ 1.76
ERBB2-212ENST00000582788 FMN1Q68DA7 1419 aa26.01■■□□□ 1.75
ERBB2-212ENST00000582788 SYNJ2O15056 1496 aa26■■□□□ 1.75
ERBB2-212ENST00000582788 FYCO1Q9BQS8 1478 aa26■■□□□ 1.75
ERBB2-212ENST00000582788 CASKIN1Q8WXD9 1431 aa26■■□□□ 1.75
ERBB2-212ENST00000582788 KIAA0586Q9BVV6 1533 aa25.97■■□□□ 1.75
ERBB2-212ENST00000582788 CFAP43Q8NDM7 1665 aa25.96■■□□□ 1.75
ERBB2-212ENST00000582788 CHMP7Q8WUX9 453 aaPredicted RBP25.96■■□□□ 1.75
ERBB2-212ENST00000582788 UGGT2Q9NYU1 1516 aa25.94■■□□□ 1.74
ERBB2-212ENST00000582788 ATP1B4Q9UN42 357 aaPredicted RBP25.93■■□□□ 1.74
ERBB2-212ENST00000582788 LRRC9Q6ZRR7 1453 aa25.93■■□□□ 1.74
ERBB2-212ENST00000582788 CEP170Q5SW79 1584 aa25.91■■□□□ 1.74
ERBB2-212ENST00000582788 FBLN2P98095 1184 aa25.9■■□□□ 1.74
ERBB2-212ENST00000582788 DNAJC5Q9H3Z4 198 aa25.9■■□□□ 1.74
ERBB2-212ENST00000582788 NUP160Q12769 1436 aa25.85■■□□□ 1.73
ERBB2-212ENST00000582788 RRBP1Q9P2E9 1410 aaKnown RBP25.85■■□□□ 1.73
ERBB2-212ENST00000582788 DIEXFQ68CQ4 756 aaKnown RBP25.85■■□□□ 1.73
ERBB2-212ENST00000582788 HNRNPUL2Q1KMD3 747 aaKnown RBP25.84■■□□□ 1.73
ERBB2-212ENST00000582788 LRRIQ1Q96JM4 1722 aa25.83■■□□□ 1.73
ERBB2-212ENST00000582788 DISP1Q96F81 1524 aa25.83■■□□□ 1.73
ERBB2-212ENST00000582788 KIAA0556O60303 1618 aa25.82■■□□□ 1.72
ERBB2-212ENST00000582788 CHD1O14646 1710 aa25.81■■□□□ 1.72
ERBB2-212ENST00000582788 ACIN1Q9UKV3 1341 aaKnown RBP25.79■■□□□ 1.72
ERBB2-212ENST00000582788 CCNB3Q8WWL7 1395 aa25.75■■□□□ 1.71
ERBB2-212ENST00000582788 PHLDB1Q86UU1 1377 aa25.74■■□□□ 1.71
ERBB2-212ENST00000582788 OSCARQ8IYS5 282 aa25.74■■□□□ 1.71
ERBB2-212ENST00000582788 HECW1Q76N89 1606 aa25.72■■□□□ 1.71
ERBB2-212ENST00000582788 NEUROD1Q13562 356 aa25.71■■□□□ 1.71
ERBB2-212ENST00000582788 JPH4Q96JJ6 628 aa25.69■■□□□ 1.7
ERBB2-212ENST00000582788 CCDC18Q5T9S5 1454 aa25.68■■□□□ 1.7
ERBB2-212ENST00000582788 MTUS2Q5JR59 1369 aa25.67■■□□□ 1.7
ERBB2-212ENST00000582788 ZNF316A6NFI3 1004 aaPredicted RBP25.65■■□□□ 1.7
ERBB2-212ENST00000582788 EPRSP07814 1512 aaKnown RBP25.65■■□□□ 1.7
ERBB2-212ENST00000582788 MAGI3Q5TCQ9 1506 aa25.62■■□□□ 1.69
ERBB2-212ENST00000582788 CARMIL2Q6F5E8 1435 aa25.61■■□□□ 1.69
ERBB2-212ENST00000582788 EHBP1L1Q8N3D4 1523 aa25.61■■□□□ 1.69
ERBB2-212ENST00000582788 CDK13Q14004 1512 aaKnown RBP25.6■■□□□ 1.69
ERBB2-212ENST00000582788 CENPBP07199 599 aaPredicted RBP25.59■■□□□ 1.69
ERBB2-212ENST00000582788 RAPGEF6Q8TEU7 1601 aa25.59■■□□□ 1.69
ERBB2-212ENST00000582788 SUPT6HQ7KZ85 1726 aaKnown RBP25.56■■□□□ 1.68
ERBB2-212ENST00000582788 NUP153P49790 1475 aaKnown RBP25.56■■□□□ 1.68
ERBB2-212ENST00000582788 NCOA2Q15596 1464 aa25.55■■□□□ 1.68
ERBB2-212ENST00000582788 ARID3CA6NKF2 412 aa25.54■■□□□ 1.68
ERBB2-212ENST00000582788 ITGAEP38570 1179 aa25.53■■□□□ 1.68
ERBB2-212ENST00000582788 PLB1Q6P1J6 1458 aa25.51■■□□□ 1.68
ERBB2-212ENST00000582788 ARHGEF11O15085 1522 aa25.51■■□□□ 1.67
ERBB2-212ENST00000582788 FAM50AQ14320 339 aaKnown RBP25.51■■□□□ 1.67
ERBB2-212ENST00000582788 FGD6Q6ZV73 1430 aa25.5■■□□□ 1.67
ERBB2-212ENST00000582788 PRG4Q92954 1404 aaPredicted RBP25.49■■□□□ 1.67
ERBB2-212ENST00000582788 CLASP1Q7Z460 1538 aa25.49■■□□□ 1.67
ERBB2-212ENST00000582788 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.47■■□□□ 1.67
ERBB2-212ENST00000582788 MYOM3Q5VTT5 1437 aa25.46■■□□□ 1.67
ERBB2-212ENST00000582788 SHROOM2Q13796 1616 aa25.45■■□□□ 1.66
ERBB2-212ENST00000582788 GTF3C3Q9Y5Q9 886 aa25.43■■□□□ 1.66
ERBB2-212ENST00000582788 ABCA8O94911 1581 aa25.42■■□□□ 1.66
ERBB2-212ENST00000582788 RIMBP3CA6NJZ7 1639 aa25.39■■□□□ 1.66
ERBB2-212ENST00000582788 RIMBP3BA6NNM3 1639 aa25.39■■□□□ 1.66
ERBB2-212ENST00000582788 RIMBP3Q9UFD9 1639 aa25.39■■□□□ 1.66
ERBB2-212ENST00000582788 PTPRGP23470 1445 aa25.35■■□□□ 1.65
ERBB2-212ENST00000582788 CDK11AQ9UQ88 783 aaPredicted RBP25.35■■□□□ 1.65
ERBB2-212ENST00000582788 PTPN23Q9H3S7 1636 aa25.35■■□□□ 1.65
ERBB2-212ENST00000582788 DHX57Q6P158 1386 aaKnown RBP25.34■■□□□ 1.65
ERBB2-212ENST00000582788 ERCC6L2Q5T890 1561 aa25.33■■□□□ 1.64
ERBB2-212ENST00000582788 RAB3GAP2Q9H2M9 1393 aa25.32■■□□□ 1.64
ERBB2-212ENST00000582788 SETD5Q9C0A6 1442 aa25.31■■□□□ 1.64
ERBB2-212ENST00000582788 TROQ12816 1431 aaPredicted RBP25.31■■□□□ 1.64
ERBB2-212ENST00000582788 CLSPNQ9HAW4 1339 aa25.3■■□□□ 1.64
ERBB2-212ENST00000582788 MYT1Q01538 1121 aa25.3■■□□□ 1.64
ERBB2-212ENST00000582788 TCOF1Q13428 1488 aaKnown RBP25.3■■□□□ 1.64
ERBB2-212ENST00000582788 ATP10BO94823 1461 aa25.29■■□□□ 1.64
ERBB2-212ENST00000582788 PTPRKQ15262 1439 aa25.28■■□□□ 1.64
ERBB2-212ENST00000582788 MIA2Q96PC5 1412 aa25.28■■□□□ 1.64
ERBB2-212ENST00000582788 MIER1Q8N108 512 aa25.27■■□□□ 1.64
ERBB2-212ENST00000582788 ADCY10Q96PN6 1610 aa25.23■■□□□ 1.63
ERBB2-212ENST00000582788 KIF14Q15058 1648 aa25.22■■□□□ 1.63
ERBB2-212ENST00000582788 UACAQ9BZF9 1416 aa25.22■■□□□ 1.63
ERBB2-212ENST00000582788 PLEKHD1A6NEE1 506 aa25.18■■□□□ 1.62
ERBB2-212ENST00000582788 HFM1A2PYH4 1435 aa25.15■■□□□ 1.62
ERBB2-212ENST00000582788 YTHDC1Q96MU7 727 aaKnown RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms