RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 JPH4Q96JJ6 628 aa38.65■■■■□ 3.78
CASC3-207ENST00000581849 PRG4Q92954 1404 aaPredicted RBP38.64■■■■□ 3.78
CASC3-207ENST00000581849 KIAA0586Q9BVV6 1533 aa38.58■■■■□ 3.77
CASC3-207ENST00000581849 CARMIL1Q5VZK9 1371 aa38.53■■■■□ 3.76
CASC3-207ENST00000581849 RAPGEF2Q9Y4G8 1499 aa38.25■■■■□ 3.71
CASC3-207ENST00000581849 IQGAP2Q13576 1575 aa38.24■■■■□ 3.71
CASC3-207ENST00000581849 CARMIL2Q6F5E8 1435 aa38.19■■■■□ 3.7
CASC3-207ENST00000581849 ADCY10Q96PN6 1610 aa38.17■■■■□ 3.7
CASC3-207ENST00000581849 MAPKBP1O60336 1514 aa38.13■■■■□ 3.69
CASC3-207ENST00000581849 NPM1P06748 294 aaKnown RBP eCLIP38.13■■■■□ 3.69
CASC3-207ENST00000581849 PTPRGP23470 1445 aa38.11■■■■□ 3.69
CASC3-207ENST00000581849 TNIKQ9UKE5 1360 aa38.1■■■■□ 3.69
CASC3-207ENST00000581849 KIF13AQ9H1H9 1805 aa38.09■■■■□ 3.69
CASC3-207ENST00000581849 UGGT2Q9NYU1 1516 aa38.05■■■■□ 3.68
CASC3-207ENST00000581849 ABCC10Q5T3U5 1492 aa38.02■■■■□ 3.68
CASC3-207ENST00000581849 DISP1Q96F81 1524 aa38.01■■■■□ 3.67
CASC3-207ENST00000581849 PRXQ9BXM0 1461 aa37.96■■■■□ 3.67
CASC3-207ENST00000581849 CTTNBP2Q8WZ74 1663 aa37.94■■■■□ 3.66
CASC3-207ENST00000581849 DIP2BQ9P265 1576 aa37.92■■■■□ 3.66
CASC3-207ENST00000581849 UHRF1BP1LA0JNW5 1464 aa37.91■■■■□ 3.66
CASC3-207ENST00000581849 ABCC2Q92887 1545 aa37.9■■■■□ 3.66
CASC3-207ENST00000581849 KIAA0556O60303 1618 aa37.89■■■■□ 3.66
CASC3-207ENST00000581849 FAM69CQ0P6D2 419 aa37.87■■■■□ 3.65
CASC3-207ENST00000581849 UACAQ9BZF9 1416 aa37.85■■■■□ 3.65
CASC3-207ENST00000581849 TTBK1Q5TCY1 1321 aaPredicted RBP37.82■■■■□ 3.64
CASC3-207ENST00000581849 GOLGA3Q08378 1498 aa37.78■■■■□ 3.64
CASC3-207ENST00000581849 EEA1Q15075 1411 aa37.74■■■■□ 3.63
CASC3-207ENST00000581849 PLB1Q6P1J6 1458 aa37.73■■■■□ 3.63
CASC3-207ENST00000581849 KDM5BQ9UGL1 1544 aa37.71■■■■□ 3.63
CASC3-207ENST00000581849 CSRNP3Q8WYN3 585 aa37.7■■■■□ 3.63
CASC3-207ENST00000581849 ASXL2Q76L83 1435 aa37.68■■■■□ 3.62
CASC3-207ENST00000581849 GLI2P10070 1586 aa37.63■■■■□ 3.61
CASC3-207ENST00000581849 ZCCHC11Q5TAX3 1644 aaKnown RBP37.58■■■■□ 3.61
CASC3-207ENST00000581849 TSPOAP1O95153 1857 aa37.54■■■■□ 3.6
CASC3-207ENST00000581849 ABCA8O94911 1581 aa37.53■■■■□ 3.6
CASC3-207ENST00000581849 KDM6BO15054 1643 aa37.48■■■■□ 3.59
CASC3-207ENST00000581849 EPRSP07814 1512 aaKnown RBP37.48■■■■□ 3.59
CASC3-207ENST00000581849 SAMD9Q5K651 1589 aa37.43■■■■□ 3.58
CASC3-207ENST00000581849 PPRC1Q5VV67 1664 aaKnown RBP37.41■■■■□ 3.58
CASC3-207ENST00000581849 WDR7Q9Y4E6 1490 aa37.41■■■■□ 3.58
CASC3-207ENST00000581849 FAM9AQ8IZU1 332 aaPredicted RBP37.41■■■■□ 3.58
CASC3-207ENST00000581849 MAP3K4Q9Y6R4 1608 aa37.39■■■■□ 3.58
CASC3-207ENST00000581849 KIF21BO75037 1637 aa37.36■■■■□ 3.57
CASC3-207ENST00000581849 AEBP2Q6ZN18 517 aaPredicted RBP37.31■■■■□ 3.56
CASC3-207ENST00000581849 TEX14Q8IWB6 1497 aa37.3■■■■□ 3.56
CASC3-207ENST00000581849 CHIC1Q5VXU3 224 aa37.27■■■■□ 3.56
CASC3-207ENST00000581849 P3H3Q8IVL6 736 aa37.26■■■■□ 3.56
CASC3-207ENST00000581849 CFAP43Q8NDM7 1665 aa37.2■■■■□ 3.55
CASC3-207ENST00000581849 RAPGEF6Q8TEU7 1601 aa37.18■■■■□ 3.54
CASC3-207ENST00000581849 ATP10BO94823 1461 aa37.18■■■■□ 3.54
CASC3-207ENST00000581849 EFCAB5A4FU69 1503 aa37.16■■■■□ 3.54
CASC3-207ENST00000581849 MAGI3Q5TCQ9 1506 aa37.15■■■■□ 3.54
CASC3-207ENST00000581849 CD109Q6YHK3 1445 aa37.11■■■■□ 3.53
CASC3-207ENST00000581849 FHOD3Q2V2M9 1422 aa37.09■■■■□ 3.53
CASC3-207ENST00000581849 COL17A1Q9UMD9 1497 aaPredicted RBP37.08■■■■□ 3.53
CASC3-207ENST00000581849 KCNH8Q96L42 1107 aa37.08■■■■□ 3.53
CASC3-207ENST00000581849 NUP153P49790 1475 aaKnown RBP37.04■■■■□ 3.52
CASC3-207ENST00000581849 ARID3CA6NKF2 412 aa37■■■■□ 3.51
CASC3-207ENST00000581849 RANGAP1P46060 587 aaPredicted RBP37■■■■□ 3.51
CASC3-207ENST00000581849 ABCA9Q8IUA7 1624 aa36.98■■■■□ 3.51
CASC3-207ENST00000581849 UBTFP17480 764 aaKnown RBP36.93■■■■□ 3.5
CASC3-207ENST00000581849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.88■■■■□ 3.49
CASC3-207ENST00000581849 HNRNPUL2Q1KMD3 747 aaKnown RBP36.88■■■■□ 3.49
CASC3-207ENST00000581849 KDM4FA0A1W2PPD8 638 aa36.87■■■■□ 3.49
CASC3-207ENST00000581849 PHLDB1Q86UU1 1377 aa36.86■■■■□ 3.49
CASC3-207ENST00000581849 ARAP3Q8WWN8 1544 aa36.85■■■■□ 3.49
CASC3-207ENST00000581849 FMN1Q68DA7 1419 aa36.81■■■■□ 3.48
CASC3-207ENST00000581849 ARHGAP35Q9NRY4 1499 aa36.8■■■■□ 3.48
CASC3-207ENST00000581849 PLEKHD1A6NEE1 506 aa36.79■■■■□ 3.48
CASC3-207ENST00000581849 NEO1Q92859 1461 aa36.76■■■■□ 3.48
CASC3-207ENST00000581849 EHMT2Q96KQ7 1210 aa36.74■■■■□ 3.47
CASC3-207ENST00000581849 ADGRL1O94910 1474 aa36.72■■■■□ 3.47
CASC3-207ENST00000581849 HECW1Q76N89 1606 aa36.7■■■■□ 3.47
CASC3-207ENST00000581849 CDK13Q14004 1512 aaKnown RBP36.65■■■■□ 3.46
CASC3-207ENST00000581849 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.63■■■■□ 3.45
CASC3-207ENST00000581849 CFAP74Q9C0B2 1584 aa36.58■■■■□ 3.45
CASC3-207ENST00000581849 TTC37Q6PGP7 1564 aa36.55■■■■□ 3.44
CASC3-207ENST00000581849 FANCAO15360 1455 aa36.52■■■■□ 3.44
CASC3-207ENST00000581849 CDK11AQ9UQ88 783 aaPredicted RBP36.52■■■■□ 3.44
CASC3-207ENST00000581849 FRMPD1Q5SYB0 1578 aa36.5■■■■□ 3.43
CASC3-207ENST00000581849 RAPGEF3O95398 923 aa36.48■■■■□ 3.43
CASC3-207ENST00000581849 ATP1B4Q9UN42 357 aaPredicted RBP36.48■■■■□ 3.43
CASC3-207ENST00000581849 AKNAQ7Z591 1439 aa36.48■■■■□ 3.43
CASC3-207ENST00000581849 DENND4BO75064 1496 aaPredicted RBP36.45■■■■□ 3.43
CASC3-207ENST00000581849 PLCH2O75038 1416 aa36.43■■■■□ 3.42
CASC3-207ENST00000581849 CASKIN1Q8WXD9 1431 aa36.42■■■■□ 3.42
CASC3-207ENST00000581849 RICTORQ6R327 1708 aa36.42■■■■□ 3.42
CASC3-207ENST00000581849 TROQ12816 1431 aaPredicted RBP36.42■■■■□ 3.42
CASC3-207ENST00000581849 LRRIQ1Q96JM4 1722 aa36.4■■■■□ 3.42
CASC3-207ENST00000581849 KIF14Q15058 1648 aa36.39■■■■□ 3.42
CASC3-207ENST00000581849 CCDC18Q5T9S5 1454 aa36.38■■■■□ 3.41
CASC3-207ENST00000581849 PCF11O94913 1555 aaKnown RBP36.37■■■■□ 3.41
CASC3-207ENST00000581849 CLIP1P30622 1438 aa36.37■■■■□ 3.41
CASC3-207ENST00000581849 MYO5CQ9NQX4 1742 aa36.37■■■■□ 3.41
CASC3-207ENST00000581849 ZMYM4Q5VZL5 1548 aa36.34■■■■□ 3.41
CASC3-207ENST00000581849 ARHGEF40Q8TER5 1519 aa36.34■■■■□ 3.41
CASC3-207ENST00000581849 FYCO1Q9BQS8 1478 aa36.31■■■■□ 3.4
CASC3-207ENST00000581849 MAGI2Q86UL8 1455 aa36.27■■■■□ 3.4
CASC3-207ENST00000581849 EFCAB2Q5VUJ9 269 aa36.26■■■■□ 3.4
CASC3-207ENST00000581849 ADAMTSL3P82987 1691 aa36.25■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms