RNA–Protein interactions for RNA: ENST00000581391.5

CUEDC1-209, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-209ENST00000581391 CHIC1Q5VXU3 224 aa23.02■■□□□ 1.28
CUEDC1-209ENST00000581391 SHROOM2Q13796 1616 aa22.97■■□□□ 1.27
CUEDC1-209ENST00000581391 PRG4Q92954 1404 aaPredicted RBP22.96■■□□□ 1.27
CUEDC1-209ENST00000581391 FAM9AQ8IZU1 332 aaPredicted RBP22.94■■□□□ 1.26
CUEDC1-209ENST00000581391 KIAA0586Q9BVV6 1533 aa22.92■■□□□ 1.26
CUEDC1-209ENST00000581391 RAPGEF2Q9Y4G8 1499 aa22.92■■□□□ 1.26
CUEDC1-209ENST00000581391 CSRNP3Q8WYN3 585 aa22.87■■□□□ 1.25
CUEDC1-209ENST00000581391 PRXQ9BXM0 1461 aa22.84■■□□□ 1.25
CUEDC1-209ENST00000581391 TTBK1Q5TCY1 1321 aaPredicted RBP22.82■■□□□ 1.24
CUEDC1-209ENST00000581391 IQGAP2Q13576 1575 aa22.77■■□□□ 1.24
CUEDC1-209ENST00000581391 TRHP20396 242 aaPredicted RBP22.74■■□□□ 1.23
CUEDC1-209ENST00000581391 EHMT2Q96KQ7 1210 aa22.74■■□□□ 1.23
CUEDC1-209ENST00000581391 EEA1Q15075 1411 aa22.7■■□□□ 1.22
CUEDC1-209ENST00000581391 DISP1Q96F81 1524 aa22.69■■□□□ 1.22
CUEDC1-209ENST00000581391 PTPRGP23470 1445 aa22.66■■□□□ 1.22
CUEDC1-209ENST00000581391 CARMIL2Q6F5E8 1435 aa22.66■■□□□ 1.22
CUEDC1-209ENST00000581391 CTTNBP2Q8WZ74 1663 aa22.66■■□□□ 1.22
CUEDC1-209ENST00000581391 UGGT2Q9NYU1 1516 aa22.66■■□□□ 1.22
CUEDC1-209ENST00000581391 TNIKQ9UKE5 1360 aa22.64■■□□□ 1.22
CUEDC1-209ENST00000581391 RANGAP1P46060 587 aaPredicted RBP22.63■■□□□ 1.21
CUEDC1-209ENST00000581391 P3H3Q8IVL6 736 aa22.6■■□□□ 1.21
CUEDC1-209ENST00000581391 ADCY10Q96PN6 1610 aa22.6■■□□□ 1.21
CUEDC1-209ENST00000581391 KIAA0556O60303 1618 aa22.57■■□□□ 1.2
CUEDC1-209ENST00000581391 NPM1P06748 294 aaKnown RBP eCLIP22.54■■□□□ 1.2
CUEDC1-209ENST00000581391 KIF21BO75037 1637 aa22.52■■□□□ 1.2
CUEDC1-209ENST00000581391 UBTFP17480 764 aaKnown RBP22.5■■□□□ 1.19
CUEDC1-209ENST00000581391 UACAQ9BZF9 1416 aa22.48■■□□□ 1.19
CUEDC1-209ENST00000581391 GOLGA3Q08378 1498 aa22.47■■□□□ 1.19
CUEDC1-209ENST00000581391 PLB1Q6P1J6 1458 aa22.45■■□□□ 1.18
CUEDC1-209ENST00000581391 ABCC2Q92887 1545 aa22.41■■□□□ 1.18
CUEDC1-209ENST00000581391 UHRF1BP1LA0JNW5 1464 aa22.41■■□□□ 1.18
CUEDC1-209ENST00000581391 FAM69CQ0P6D2 419 aa22.41■■□□□ 1.18
CUEDC1-209ENST00000581391 ARID3CA6NKF2 412 aa22.4■■□□□ 1.18
CUEDC1-209ENST00000581391 KIF13AQ9H1H9 1805 aa22.38■■□□□ 1.17
CUEDC1-209ENST00000581391 SAMD9Q5K651 1589 aa22.38■■□□□ 1.17
CUEDC1-209ENST00000581391 MAPKBP1O60336 1514 aa22.38■■□□□ 1.17
CUEDC1-209ENST00000581391 FHOD3Q2V2M9 1422 aa22.37■■□□□ 1.17
CUEDC1-209ENST00000581391 ABCA8O94911 1581 aa22.35■■□□□ 1.17
CUEDC1-209ENST00000581391 ABCC10Q5T3U5 1492 aa22.34■■□□□ 1.17
CUEDC1-209ENST00000581391 ASXL2Q76L83 1435 aa22.33■■□□□ 1.17
CUEDC1-209ENST00000581391 KDM5BQ9UGL1 1544 aa22.33■■□□□ 1.17
CUEDC1-209ENST00000581391 ZCCHC11Q5TAX3 1644 aaKnown RBP22.31■■□□□ 1.16
CUEDC1-209ENST00000581391 DIP2BQ9P265 1576 aa22.29■■□□□ 1.16
CUEDC1-209ENST00000581391 KCNH8Q96L42 1107 aa22.24■■□□□ 1.15
CUEDC1-209ENST00000581391 ARHGAP35Q9NRY4 1499 aa22.23■■□□□ 1.15
CUEDC1-209ENST00000581391 TSPOAP1O95153 1857 aa22.23■■□□□ 1.15
CUEDC1-209ENST00000581391 ATP10BO94823 1461 aa22.22■■□□□ 1.15
CUEDC1-209ENST00000581391 EFCAB5A4FU69 1503 aa22.21■■□□□ 1.15
CUEDC1-209ENST00000581391 RAPGEF6Q8TEU7 1601 aa22.2■■□□□ 1.15
CUEDC1-209ENST00000581391 LOC105371045A0A1W2PR82 267 aa22.19■■□□□ 1.14
CUEDC1-209ENST00000581391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.19■■□□□ 1.14
CUEDC1-209ENST00000581391 HNRNPUL2Q1KMD3 747 aaKnown RBP22.19■■□□□ 1.14
CUEDC1-209ENST00000581391 EPRSP07814 1512 aaKnown RBP22.18■■□□□ 1.14
CUEDC1-209ENST00000581391 NUP153P49790 1475 aaKnown RBP22.16■■□□□ 1.14
CUEDC1-209ENST00000581391 WDR7Q9Y4E6 1490 aa22.15■■□□□ 1.14
CUEDC1-209ENST00000581391 ATP1B4Q9UN42 357 aaPredicted RBP22.15■■□□□ 1.14
CUEDC1-209ENST00000581391 GLI2P10070 1586 aa22.12■■□□□ 1.13
CUEDC1-209ENST00000581391 PPRC1Q5VV67 1664 aaKnown RBP22.08■■□□□ 1.13
CUEDC1-209ENST00000581391 CLIP1P30622 1438 aa22.06■■□□□ 1.12
CUEDC1-209ENST00000581391 CDK13Q14004 1512 aaKnown RBP22.05■■□□□ 1.12
CUEDC1-209ENST00000581391 FMN1Q68DA7 1419 aa22.05■■□□□ 1.12
CUEDC1-209ENST00000581391 MAP3K4Q9Y6R4 1608 aa22.04■■□□□ 1.12
CUEDC1-209ENST00000581391 PLEKHD1A6NEE1 506 aa22.02■■□□□ 1.12
CUEDC1-209ENST00000581391 CD109Q6YHK3 1445 aa22.01■■□□□ 1.11
CUEDC1-209ENST00000581391 COL17A1Q9UMD9 1497 aaPredicted RBP21.97■■□□□ 1.11
CUEDC1-209ENST00000581391 KDM6BO15054 1643 aa21.95■■□□□ 1.1
CUEDC1-209ENST00000581391 LRRIQ1Q96JM4 1722 aa21.95■■□□□ 1.1
CUEDC1-209ENST00000581391 CEP162Q5TB80 1403 aa21.95■■□□□ 1.1
CUEDC1-209ENST00000581391 HECW1Q76N89 1606 aa21.94■■□□□ 1.1
CUEDC1-209ENST00000581391 CFAP43Q8NDM7 1665 aa21.94■■□□□ 1.1
CUEDC1-209ENST00000581391 PCF11O94913 1555 aaKnown RBP21.92■■□□□ 1.1
CUEDC1-209ENST00000581391 CASKIN1Q8WXD9 1431 aa21.91■■□□□ 1.1
CUEDC1-209ENST00000581391 MAGI3Q5TCQ9 1506 aa21.9■■□□□ 1.1
CUEDC1-209ENST00000581391 ABCA9Q8IUA7 1624 aa21.9■■□□□ 1.1
CUEDC1-209ENST00000581391 TEX14Q8IWB6 1497 aa21.9■■□□□ 1.1
CUEDC1-209ENST00000581391 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.85■■□□□ 1.09
CUEDC1-209ENST00000581391 CDK11AQ9UQ88 783 aaPredicted RBP21.84■■□□□ 1.09
CUEDC1-209ENST00000581391 TTC37Q6PGP7 1564 aa21.82■■□□□ 1.08
CUEDC1-209ENST00000581391 FYCO1Q9BQS8 1478 aa21.81■■□□□ 1.08
CUEDC1-209ENST00000581391 KIF14Q15058 1648 aa21.8■■□□□ 1.08
CUEDC1-209ENST00000581391 TROQ12816 1431 aaPredicted RBP21.8■■□□□ 1.08
CUEDC1-209ENST00000581391 RAPGEF3O95398 923 aa21.78■■□□□ 1.08
CUEDC1-209ENST00000581391 CCDC18Q5T9S5 1454 aa21.76■■□□□ 1.07
CUEDC1-209ENST00000581391 ARAP3Q8WWN8 1544 aa21.72■■□□□ 1.07
CUEDC1-209ENST00000581391 PLCH2O75038 1416 aa21.72■■□□□ 1.07
CUEDC1-209ENST00000581391 AKNAQ7Z591 1439 aa21.72■■□□□ 1.07
CUEDC1-209ENST00000581391 NEO1Q92859 1461 aa21.71■■□□□ 1.07
CUEDC1-209ENST00000581391 FANCAO15360 1455 aa21.71■■□□□ 1.07
CUEDC1-209ENST00000581391 PHLDB1Q86UU1 1377 aa21.67■■□□□ 1.06
CUEDC1-209ENST00000581391 EFCAB2Q5VUJ9 269 aa21.66■■□□□ 1.06
CUEDC1-209ENST00000581391 VPS8Q8N3P4 1428 aa21.65■■□□□ 1.06
CUEDC1-209ENST00000581391 KDM4FA0A1W2PPD8 638 aa21.65■■□□□ 1.06
CUEDC1-209ENST00000581391 MYO5CQ9NQX4 1742 aa21.65■■□□□ 1.06
CUEDC1-209ENST00000581391 MTUS2Q5JR59 1369 aa21.62■■□□□ 1.05
CUEDC1-209ENST00000581391 FRMPD1Q5SYB0 1578 aa21.62■■□□□ 1.05
CUEDC1-209ENST00000581391 SCAPERQ9BY12 1400 aa21.62■■□□□ 1.05
CUEDC1-209ENST00000581391 CDC42BPBQ9Y5S2 1711 aa21.61■■□□□ 1.05
CUEDC1-209ENST00000581391 DENND4BO75064 1496 aaPredicted RBP21.61■■□□□ 1.05
CUEDC1-209ENST00000581391 ARHGAP5Q13017 1502 aa21.6■■□□□ 1.05
CUEDC1-209ENST00000581391 ADGRL1O94910 1474 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms