RNA–Protein interactions for RNA: ENST00000580977.1

C19orf47-205, Transcript of chromosome 19 open reading frame 47, humanhuman

TSL 4

Gene C19orf47, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-205ENST00000580977 IGF1RP08069 1367 aa26.15■■□□□ 1.78
C19orf47-205ENST00000580977 JPH4Q96JJ6 628 aa26.14■■□□□ 1.78
C19orf47-205ENST00000580977 KIAA0586Q9BVV6 1533 aa26.08■■□□□ 1.77
C19orf47-205ENST00000580977 CARMIL1Q5VZK9 1371 aa26■■□□□ 1.75
C19orf47-205ENST00000580977 KIF13AQ9H1H9 1805 aa25.88■■□□□ 1.73
C19orf47-205ENST00000580977 ADCY10Q96PN6 1610 aa25.88■■□□□ 1.73
C19orf47-205ENST00000580977 IQGAP2Q13576 1575 aa25.86■■□□□ 1.73
C19orf47-205ENST00000580977 MAPKBP1O60336 1514 aa25.86■■□□□ 1.73
C19orf47-205ENST00000580977 NPM1P06748 294 aaKnown RBP eCLIP25.84■■□□□ 1.73
C19orf47-205ENST00000580977 CARMIL2Q6F5E8 1435 aa25.82■■□□□ 1.72
C19orf47-205ENST00000580977 RAPGEF2Q9Y4G8 1499 aa25.81■■□□□ 1.72
C19orf47-205ENST00000580977 ABCC10Q5T3U5 1492 aa25.79■■□□□ 1.72
C19orf47-205ENST00000580977 PTPRGP23470 1445 aa25.78■■□□□ 1.72
C19orf47-205ENST00000580977 TNIKQ9UKE5 1360 aa25.76■■□□□ 1.71
C19orf47-205ENST00000580977 DIP2BQ9P265 1576 aa25.75■■□□□ 1.71
C19orf47-205ENST00000580977 DISP1Q96F81 1524 aa25.7■■□□□ 1.7
C19orf47-205ENST00000580977 UGGT2Q9NYU1 1516 aa25.7■■□□□ 1.7
C19orf47-205ENST00000580977 FAM69CQ0P6D2 419 aa25.7■■□□□ 1.7
C19orf47-205ENST00000580977 ABCC2Q92887 1545 aa25.67■■□□□ 1.7
C19orf47-205ENST00000580977 UHRF1BP1LA0JNW5 1464 aa25.65■■□□□ 1.7
C19orf47-205ENST00000580977 CTTNBP2Q8WZ74 1663 aa25.64■■□□□ 1.69
C19orf47-205ENST00000580977 TTBK1Q5TCY1 1321 aaPredicted RBP25.63■■□□□ 1.69
C19orf47-205ENST00000580977 KIAA0556O60303 1618 aa25.63■■□□□ 1.69
C19orf47-205ENST00000580977 UACAQ9BZF9 1416 aa25.61■■□□□ 1.69
C19orf47-205ENST00000580977 PRXQ9BXM0 1461 aa25.57■■□□□ 1.68
C19orf47-205ENST00000580977 PLB1Q6P1J6 1458 aa25.55■■□□□ 1.68
C19orf47-205ENST00000580977 ASXL2Q76L83 1435 aa25.54■■□□□ 1.68
C19orf47-205ENST00000580977 GOLGA3Q08378 1498 aa25.52■■□□□ 1.68
C19orf47-205ENST00000580977 KDM5BQ9UGL1 1544 aa25.52■■□□□ 1.68
C19orf47-205ENST00000580977 AEBP2Q6ZN18 517 aaPredicted RBP25.51■■□□□ 1.67
C19orf47-205ENST00000580977 TSPOAP1O95153 1857 aa25.5■■□□□ 1.67
C19orf47-205ENST00000580977 GLI2P10070 1586 aa25.5■■□□□ 1.67
C19orf47-205ENST00000580977 KDM6BO15054 1643 aa25.49■■□□□ 1.67
C19orf47-205ENST00000580977 ZCCHC11Q5TAX3 1644 aaKnown RBP25.47■■□□□ 1.67
C19orf47-205ENST00000580977 EPRSP07814 1512 aaKnown RBP25.4■■□□□ 1.66
C19orf47-205ENST00000580977 PPRC1Q5VV67 1664 aaKnown RBP25.39■■□□□ 1.65
C19orf47-205ENST00000580977 ABCA8O94911 1581 aa25.37■■□□□ 1.65
C19orf47-205ENST00000580977 EEA1Q15075 1411 aa25.37■■□□□ 1.65
C19orf47-205ENST00000580977 CSRNP3Q8WYN3 585 aa25.36■■□□□ 1.65
C19orf47-205ENST00000580977 MAP3K4Q9Y6R4 1608 aa25.36■■□□□ 1.65
C19orf47-205ENST00000580977 WDR7Q9Y4E6 1490 aa25.34■■□□□ 1.65
C19orf47-205ENST00000580977 TEX14Q8IWB6 1497 aa25.29■■□□□ 1.64
C19orf47-205ENST00000580977 SAMD9Q5K651 1589 aa25.27■■□□□ 1.64
C19orf47-205ENST00000580977 FAM9AQ8IZU1 332 aaPredicted RBP25.26■■□□□ 1.63
C19orf47-205ENST00000580977 CFAP43Q8NDM7 1665 aa25.21■■□□□ 1.63
C19orf47-205ENST00000580977 P3H3Q8IVL6 736 aa25.17■■□□□ 1.62
C19orf47-205ENST00000580977 MAGI3Q5TCQ9 1506 aa25.16■■□□□ 1.62
C19orf47-205ENST00000580977 KIF21BO75037 1637 aa25.15■■□□□ 1.62
C19orf47-205ENST00000580977 COL17A1Q9UMD9 1497 aaPredicted RBP25.15■■□□□ 1.62
C19orf47-205ENST00000580977 CD109Q6YHK3 1445 aa25.14■■□□□ 1.62
C19orf47-205ENST00000580977 RAPGEF6Q8TEU7 1601 aa25.13■■□□□ 1.61
C19orf47-205ENST00000580977 ATP10BO94823 1461 aa25.13■■□□□ 1.61
C19orf47-205ENST00000580977 KCNH8Q96L42 1107 aa25.11■■□□□ 1.61
C19orf47-205ENST00000580977 KDM4FA0A1W2PPD8 638 aa25.09■■□□□ 1.61
C19orf47-205ENST00000580977 EFCAB5A4FU69 1503 aa25.07■■□□□ 1.6
C19orf47-205ENST00000580977 ARID3CA6NKF2 412 aa25.05■■□□□ 1.6
C19orf47-205ENST00000580977 FHOD3Q2V2M9 1422 aa25.04■■□□□ 1.6
C19orf47-205ENST00000580977 ABCA9Q8IUA7 1624 aa25.02■■□□□ 1.6
C19orf47-205ENST00000580977 NUP153P49790 1475 aaKnown RBP25.02■■□□□ 1.6
C19orf47-205ENST00000580977 RANGAP1P46060 587 aaPredicted RBP25■■□□□ 1.59
C19orf47-205ENST00000580977 ADGRL1O94910 1474 aa24.99■■□□□ 1.59
C19orf47-205ENST00000580977 CHIC1Q5VXU3 224 aa24.96■■□□□ 1.59
C19orf47-205ENST00000580977 ARAP3Q8WWN8 1544 aa24.95■■□□□ 1.58
C19orf47-205ENST00000580977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.94■■□□□ 1.58
C19orf47-205ENST00000580977 HNRNPUL2Q1KMD3 747 aaKnown RBP24.94■■□□□ 1.58
C19orf47-205ENST00000580977 PHLDB1Q86UU1 1377 aa24.93■■□□□ 1.58
C19orf47-205ENST00000580977 NEO1Q92859 1461 aa24.89■■□□□ 1.57
C19orf47-205ENST00000580977 UBTFP17480 764 aaKnown RBP24.86■■□□□ 1.57
C19orf47-205ENST00000580977 PLEKHD1A6NEE1 506 aa24.84■■□□□ 1.57
C19orf47-205ENST00000580977 FMN1Q68DA7 1419 aa24.81■■□□□ 1.56
C19orf47-205ENST00000580977 ARHGAP35Q9NRY4 1499 aa24.79■■□□□ 1.56
C19orf47-205ENST00000580977 HECW1Q76N89 1606 aa24.79■■□□□ 1.56
C19orf47-205ENST00000580977 EHMT2Q96KQ7 1210 aa24.78■■□□□ 1.56
C19orf47-205ENST00000580977 CFAP74Q9C0B2 1584 aa24.78■■□□□ 1.56
C19orf47-205ENST00000580977 CDK13Q14004 1512 aaKnown RBP24.77■■□□□ 1.56
C19orf47-205ENST00000580977 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.77■■□□□ 1.56
C19orf47-205ENST00000580977 FRMPD1Q5SYB0 1578 aa24.75■■□□□ 1.55
C19orf47-205ENST00000580977 TTC37Q6PGP7 1564 aa24.74■■□□□ 1.55
C19orf47-205ENST00000580977 FANCAO15360 1455 aa24.71■■□□□ 1.55
C19orf47-205ENST00000580977 RAPGEF3O95398 923 aa24.71■■□□□ 1.55
C19orf47-205ENST00000580977 AKNAQ7Z591 1439 aa24.69■■□□□ 1.54
C19orf47-205ENST00000580977 DENND4BO75064 1496 aaPredicted RBP24.68■■□□□ 1.54
C19orf47-205ENST00000580977 RICTORQ6R327 1708 aa24.67■■□□□ 1.54
C19orf47-205ENST00000580977 ARHGEF40Q8TER5 1519 aa24.65■■□□□ 1.54
C19orf47-205ENST00000580977 ATP1B4Q9UN42 357 aaPredicted RBP24.64■■□□□ 1.54
C19orf47-205ENST00000580977 CDK11AQ9UQ88 783 aaPredicted RBP24.64■■□□□ 1.54
C19orf47-205ENST00000580977 PLCH2O75038 1416 aa24.61■■□□□ 1.53
C19orf47-205ENST00000580977 HECW2Q9P2P5 1572 aa24.61■■□□□ 1.53
C19orf47-205ENST00000580977 KIF14Q15058 1648 aa24.61■■□□□ 1.53
C19orf47-205ENST00000580977 ZMYM4Q5VZL5 1548 aa24.61■■□□□ 1.53
C19orf47-205ENST00000580977 ADAMTSL3P82987 1691 aa24.6■■□□□ 1.53
C19orf47-205ENST00000580977 MYO5CQ9NQX4 1742 aa24.59■■□□□ 1.53
C19orf47-205ENST00000580977 TROQ12816 1431 aaPredicted RBP24.58■■□□□ 1.53
C19orf47-205ENST00000580977 BCORL1Q5H9F3 1711 aa24.58■■□□□ 1.52
C19orf47-205ENST00000580977 CLIP1P30622 1438 aa24.57■■□□□ 1.52
C19orf47-205ENST00000580977 LRRIQ1Q96JM4 1722 aa24.57■■□□□ 1.52
C19orf47-205ENST00000580977 PCF11O94913 1555 aaKnown RBP24.55■■□□□ 1.52
C19orf47-205ENST00000580977 CCDC18Q5T9S5 1454 aa24.54■■□□□ 1.52
C19orf47-205ENST00000580977 MAGI2Q86UL8 1455 aa24.54■■□□□ 1.52
C19orf47-205ENST00000580977 ZFYVE16Q7Z3T8 1539 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms