RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 TOP2BQ02880 1626 aa12.29□□□□□ -0.44
CCDC178-209ENST00000579947 NUP160Q12769 1436 aa12.23□□□□□ -0.45
CCDC178-209ENST00000579947 PPRC1Q5VV67 1664 aaKnown RBP12.22□□□□□ -0.45
CCDC178-209ENST00000579947 GRIN2AQ12879 1464 aa12.21□□□□□ -0.45
CCDC178-209ENST00000579947 FGD5Q6ZNL6 1462 aa12.2□□□□□ -0.46
CCDC178-209ENST00000579947 ADCY10Q96PN6 1610 aa12.2□□□□□ -0.46
CCDC178-209ENST00000579947 NPM1P06748 294 aaKnown RBP eCLIP12.19□□□□□ -0.46
CCDC178-209ENST00000579947 CCDC88BA6NC98 1476 aa12.18□□□□□ -0.46
CCDC178-209ENST00000579947 ABCA5Q8WWZ7 1642 aa12.16□□□□□ -0.46
CCDC178-209ENST00000579947 GLI2P10070 1586 aa12.15□□□□□ -0.46
CCDC178-209ENST00000579947 PRG4Q92954 1404 aaPredicted RBP12.13□□□□□ -0.47
CCDC178-209ENST00000579947 ADAMTS12P58397 1594 aa12.13□□□□□ -0.47
CCDC178-209ENST00000579947 COL17A1Q9UMD9 1497 aaPredicted RBP12.11□□□□□ -0.47
CCDC178-209ENST00000579947 CERKQ8TCT0 537 aa12.1□□□□□ -0.47
CCDC178-209ENST00000579947 PCF11O94913 1555 aaKnown RBP12.08□□□□□ -0.48
CCDC178-209ENST00000579947 CUX1P39880 1505 aa12.05□□□□□ -0.48
CCDC178-209ENST00000579947 ABCA10Q8WWZ4 1543 aa12.04□□□□□ -0.48
CCDC178-209ENST00000579947 MAP3K4Q9Y6R4 1608 aa12.03□□□□□ -0.48
CCDC178-209ENST00000579947 TEX14Q8IWB6 1497 aa12.02□□□□□ -0.49
CCDC178-209ENST00000579947 PTPRMP28827 1452 aa12.01□□□□□ -0.49
CCDC178-209ENST00000579947 ADAMTSL3P82987 1691 aa12□□□□□ -0.49
CCDC178-209ENST00000579947 FHAD1B1AJZ9 1412 aa12□□□□□ -0.49
CCDC178-209ENST00000579947 PLB1Q6P1J6 1458 aa11.99□□□□□ -0.49
CCDC178-209ENST00000579947 KIF21BO75037 1637 aa11.99□□□□□ -0.49
CCDC178-209ENST00000579947 JPH4Q96JJ6 628 aa11.99□□□□□ -0.49
CCDC178-209ENST00000579947 RUSC2Q8N2Y8 1516 aa11.98□□□□□ -0.49
CCDC178-209ENST00000579947 KIAA0586Q9BVV6 1533 aa11.96□□□□□ -0.49
CCDC178-209ENST00000579947 ASXL2Q76L83 1435 aa11.95□□□□□ -0.5
CCDC178-209ENST00000579947 ABCC2Q92887 1545 aa11.92□□□□□ -0.5
CCDC178-209ENST00000579947 EPRSP07814 1512 aaKnown RBP11.91□□□□□ -0.5
CCDC178-209ENST00000579947 ERICH3Q5RHP9 1530 aa11.89□□□□□ -0.51
CCDC178-209ENST00000579947 CUL7Q14999 1698 aa11.89□□□□□ -0.51
CCDC178-209ENST00000579947 BCORL1Q5H9F3 1711 aa11.86□□□□□ -0.51
CCDC178-209ENST00000579947 MADDQ8WXG6 1647 aa11.85□□□□□ -0.51
CCDC178-209ENST00000579947 UHRF1BP1LA0JNW5 1464 aa11.84□□□□□ -0.51
CCDC178-209ENST00000579947 IQSEC2Q5JU85 1478 aa11.82□□□□□ -0.52
CCDC178-209ENST00000579947 MAGI3Q5TCQ9 1506 aa11.81□□□□□ -0.52
CCDC178-209ENST00000579947 HSPA2P54652 639 aa11.8□□□□□ -0.52
CCDC178-209ENST00000579947 PTPRGP23470 1445 aa11.79□□□□□ -0.52
CCDC178-209ENST00000579947 RIMS1Q86UR5 1692 aaKnown RBP11.78□□□□□ -0.52
CCDC178-209ENST00000579947 CFAP43Q8NDM7 1665 aa11.78□□□□□ -0.52
CCDC178-209ENST00000579947 KDM5BQ9UGL1 1544 aa11.76□□□□□ -0.53
CCDC178-209ENST00000579947 MED1Q15648 1581 aaPredicted RBP11.75□□□□□ -0.53
CCDC178-209ENST00000579947 ARAP3Q8WWN8 1544 aa11.75□□□□□ -0.53
CCDC178-209ENST00000579947 WRNQ14191 1432 aaPredicted RBP eCLIP11.74□□□□□ -0.53
CCDC178-209ENST00000579947 ZCCHC11Q5TAX3 1644 aaKnown RBP11.74□□□□□ -0.53
CCDC178-209ENST00000579947 TNIKQ9UKE5 1360 aa11.72□□□□□ -0.53
CCDC178-209ENST00000579947 STRCQ7RTU9 1775 aa11.72□□□□□ -0.53
CCDC178-209ENST00000579947 LTBP4Q8N2S1 1624 aa11.71□□□□□ -0.54
CCDC178-209ENST00000579947 UACAQ9BZF9 1416 aa11.7□□□□□ -0.54
CCDC178-209ENST00000579947 DMRT2Q9Y5R5 561 aa11.7□□□□□ -0.54
CCDC178-209ENST00000579947 WDR7Q9Y4E6 1490 aa11.7□□□□□ -0.54
CCDC178-209ENST00000579947 YEATS2Q9ULM3 1422 aa11.69□□□□□ -0.54
CCDC178-209ENST00000579947 CD109Q6YHK3 1445 aa11.69□□□□□ -0.54
CCDC178-209ENST00000579947 PREX1Q8TCU6 1659 aa11.68□□□□□ -0.54
CCDC178-209ENST00000579947 BIVM-ERCC5R4GMW8 1640 aa11.67□□□□□ -0.54
CCDC178-209ENST00000579947 PTPRTO14522 1441 aa11.66□□□□□ -0.54
CCDC178-209ENST00000579947 CARMIL2Q6F5E8 1435 aa11.65□□□□□ -0.54
CCDC178-209ENST00000579947 TTC37Q6PGP7 1564 aa11.62□□□□□ -0.55
CCDC178-209ENST00000579947 PHLDB1Q86UU1 1377 aa11.61□□□□□ -0.55
CCDC178-209ENST00000579947 ARHGEF40Q8TER5 1519 aa11.6□□□□□ -0.55
CCDC178-209ENST00000579947 FRMPD1Q5SYB0 1578 aa11.6□□□□□ -0.55
CCDC178-209ENST00000579947 ARID4BQ4LE39 1312 aaPredicted RBP11.59□□□□□ -0.55
CCDC178-209ENST00000579947 FER1L4A9Z1Z3 1794 aa11.57□□□□□ -0.56
CCDC178-209ENST00000579947 TTBK1Q5TCY1 1321 aaPredicted RBP11.56□□□□□ -0.56
CCDC178-209ENST00000579947 POGZQ7Z3K3 1410 aa11.55□□□□□ -0.56
CCDC178-209ENST00000579947 FANCAO15360 1455 aa11.54□□□□□ -0.56
CCDC178-209ENST00000579947 DISP1Q96F81 1524 aa11.53□□□□□ -0.56
CCDC178-209ENST00000579947 PHF23Q9BUL5 403 aaPredicted RBP11.52□□□□□ -0.57
CCDC178-209ENST00000579947 IQGAP2Q13576 1575 aa11.51□□□□□ -0.57
CCDC178-209ENST00000579947 UBAP1LF5GYI3 381 aa11.51□□□□□ -0.57
CCDC178-209ENST00000579947 NEO1Q92859 1461 aa11.51□□□□□ -0.57
CCDC178-209ENST00000579947 SIGLEC1Q9BZZ2 1709 aa11.5□□□□□ -0.57
CCDC178-209ENST00000579947 PLPPR3Q6T4P5 718 aa11.49□□□□□ -0.57
CCDC178-209ENST00000579947 ABCA9Q8IUA7 1624 aa11.48□□□□□ -0.57
CCDC178-209ENST00000579947 UHRF1BP1Q6BDS2 1440 aa11.48□□□□□ -0.57
CCDC178-209ENST00000579947 RAPGEF3O95398 923 aa11.48□□□□□ -0.57
CCDC178-209ENST00000579947 ARHGEF12Q9NZN5 1544 aa11.47□□□□□ -0.57
CCDC178-209ENST00000579947 HSPA1LP34931 641 aa11.46□□□□□ -0.57
CCDC178-209ENST00000579947 RICTORQ6R327 1708 aa11.46□□□□□ -0.57
CCDC178-209ENST00000579947 AKNAQ7Z591 1439 aa11.45□□□□□ -0.58
CCDC178-209ENST00000579947 KCNH8Q96L42 1107 aa11.45□□□□□ -0.58
CCDC178-209ENST00000579947 KIAA0556O60303 1618 aa11.45□□□□□ -0.58
CCDC178-209ENST00000579947 ZMYM4Q5VZL5 1548 aa11.44□□□□□ -0.58
CCDC178-209ENST00000579947 UGGT2Q9NYU1 1516 aa11.44□□□□□ -0.58
CCDC178-209ENST00000579947 NCOA1Q15788 1441 aa11.43□□□□□ -0.58
CCDC178-209ENST00000579947 ABCA8O94911 1581 aa11.42□□□□□ -0.58
CCDC178-209ENST00000579947 EFCAB5A4FU69 1503 aa11.42□□□□□ -0.58
CCDC178-209ENST00000579947 IGF1RP08069 1367 aa11.41□□□□□ -0.58
CCDC178-209ENST00000579947 ZFYVE16Q7Z3T8 1539 aa11.41□□□□□ -0.58
CCDC178-209ENST00000579947 SETD1BQ9UPS6 1966 aaKnown RBP11.4□□□□□ -0.58
CCDC178-209ENST00000579947 FHOD3Q2V2M9 1422 aa11.4□□□□□ -0.58
CCDC178-209ENST00000579947 DENND4BO75064 1496 aaPredicted RBP11.37□□□□□ -0.59
CCDC178-209ENST00000579947 MAGI2Q86UL8 1455 aa11.37□□□□□ -0.59
CCDC178-209ENST00000579947 RGS17Q9UGC6 210 aaPredicted RBP11.36□□□□□ -0.59
CCDC178-209ENST00000579947 ZNF335Q9H4Z2 1342 aaPredicted RBP11.35□□□□□ -0.59
CCDC178-209ENST00000579947 CFAP74Q9C0B2 1584 aa11.34□□□□□ -0.59
CCDC178-209ENST00000579947 CEBPAP49715 358 aaPredicted RBP11.33□□□□□ -0.6
CCDC178-209ENST00000579947 C3P01024 1663 aa11.32□□□□□ -0.6
CCDC178-209ENST00000579947 MLECQ14165 292 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms