RNA–Protein interactions for RNA: ENST00000579755.1

CDKN2A-214, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN2A, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-214ENST00000579755 CUL7Q14999 1698 aa40.81■■■■■ 4.12
CDKN2A-214ENST00000579755 RUSC2Q8N2Y8 1516 aa40.73■■■■■ 4.11
CDKN2A-214ENST00000579755 CARMIL1Q5VZK9 1371 aa40.71■■■■■ 4.11
CDKN2A-214ENST00000579755 KIAA0586Q9BVV6 1533 aa40.66■■■■■ 4.1
CDKN2A-214ENST00000579755 NPM1P06748 294 aaKnown RBP eCLIP40.47■■■■■ 4.07
CDKN2A-214ENST00000579755 RAPGEF2Q9Y4G8 1499 aa40.36■■■■■ 4.05
CDKN2A-214ENST00000579755 CARMIL2Q6F5E8 1435 aa40.33■■■■■ 4.05
CDKN2A-214ENST00000579755 TTBK1Q5TCY1 1321 aaPredicted RBP40.33■■■■■ 4.05
CDKN2A-214ENST00000579755 IQGAP2Q13576 1575 aa40.31■■■■■ 4.04
CDKN2A-214ENST00000579755 PTPRGP23470 1445 aa40.27■■■■■ 4.04
CDKN2A-214ENST00000579755 TNIKQ9UKE5 1360 aa40.22■■■■■ 4.03
CDKN2A-214ENST00000579755 ADCY10Q96PN6 1610 aa40.2■■■■■ 4.03
CDKN2A-214ENST00000579755 FAM69CQ0P6D2 419 aa40.14■■■■■ 4.02
CDKN2A-214ENST00000579755 MAPKBP1O60336 1514 aa40.11■■■■■ 4.01
CDKN2A-214ENST00000579755 KIF13AQ9H1H9 1805 aa40.1■■■■■ 4.01
CDKN2A-214ENST00000579755 ABCC10Q5T3U5 1492 aa40.06■■■■■ 4
CDKN2A-214ENST00000579755 DISP1Q96F81 1524 aa40.04■■■■■ 4
CDKN2A-214ENST00000579755 UGGT2Q9NYU1 1516 aa40.03■■■■■ 4
CDKN2A-214ENST00000579755 PRXQ9BXM0 1461 aa39.96■■■■□ 3.99
CDKN2A-214ENST00000579755 CTTNBP2Q8WZ74 1663 aa39.96■■■■□ 3.99
CDKN2A-214ENST00000579755 UACAQ9BZF9 1416 aa39.95■■■■□ 3.99
CDKN2A-214ENST00000579755 ABCC2Q92887 1545 aa39.94■■■■□ 3.98
CDKN2A-214ENST00000579755 DIP2BQ9P265 1576 aa39.92■■■■□ 3.98
CDKN2A-214ENST00000579755 KIAA0556O60303 1618 aa39.91■■■■□ 3.98
CDKN2A-214ENST00000579755 CSRNP3Q8WYN3 585 aa39.9■■■■□ 3.98
CDKN2A-214ENST00000579755 UHRF1BP1LA0JNW5 1464 aa39.88■■■■□ 3.98
CDKN2A-214ENST00000579755 GOLGA3Q08378 1498 aa39.85■■■■□ 3.97
CDKN2A-214ENST00000579755 PLB1Q6P1J6 1458 aa39.78■■■■□ 3.96
CDKN2A-214ENST00000579755 ASXL2Q76L83 1435 aa39.78■■■■□ 3.96
CDKN2A-214ENST00000579755 FAM9AQ8IZU1 332 aaPredicted RBP39.76■■■■□ 3.96
CDKN2A-214ENST00000579755 EEA1Q15075 1411 aa39.74■■■■□ 3.95
CDKN2A-214ENST00000579755 TSPOAP1O95153 1857 aa39.72■■■■□ 3.95
CDKN2A-214ENST00000579755 AEBP2Q6ZN18 517 aaPredicted RBP39.71■■■■□ 3.95
CDKN2A-214ENST00000579755 KDM5BQ9UGL1 1544 aa39.7■■■■□ 3.95
CDKN2A-214ENST00000579755 ZCCHC11Q5TAX3 1644 aaKnown RBP39.62■■■■□ 3.93
CDKN2A-214ENST00000579755 P3H3Q8IVL6 736 aa39.61■■■■□ 3.93
CDKN2A-214ENST00000579755 GLI2P10070 1586 aa39.58■■■■□ 3.93
CDKN2A-214ENST00000579755 KDM6BO15054 1643 aa39.55■■■■□ 3.92
CDKN2A-214ENST00000579755 EPRSP07814 1512 aaKnown RBP39.51■■■■□ 3.92
CDKN2A-214ENST00000579755 ABCA8O94911 1581 aa39.5■■■■□ 3.91
CDKN2A-214ENST00000579755 RANGAP1P46060 587 aaPredicted RBP39.49■■■■□ 3.91
CDKN2A-214ENST00000579755 CHIC1Q5VXU3 224 aa39.45■■■■□ 3.91
CDKN2A-214ENST00000579755 WDR7Q9Y4E6 1490 aa39.44■■■■□ 3.9
CDKN2A-214ENST00000579755 KCNH8Q96L42 1107 aa39.41■■■■□ 3.9
CDKN2A-214ENST00000579755 ARID3CA6NKF2 412 aa39.37■■■■□ 3.89
CDKN2A-214ENST00000579755 SAMD9Q5K651 1589 aa39.36■■■■□ 3.89
CDKN2A-214ENST00000579755 PPRC1Q5VV67 1664 aaKnown RBP39.35■■■■□ 3.89
CDKN2A-214ENST00000579755 MAP3K4Q9Y6R4 1608 aa39.35■■■■□ 3.89
CDKN2A-214ENST00000579755 TEX14Q8IWB6 1497 aa39.34■■■■□ 3.89
CDKN2A-214ENST00000579755 KIF21BO75037 1637 aa39.32■■■■□ 3.88
CDKN2A-214ENST00000579755 EHMT2Q96KQ7 1210 aa39.28■■■■□ 3.88
CDKN2A-214ENST00000579755 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.26■■■■□ 3.88
CDKN2A-214ENST00000579755 HNRNPUL2Q1KMD3 747 aaKnown RBP39.26■■■■□ 3.88
CDKN2A-214ENST00000579755 UBTFP17480 764 aaKnown RBP39.24■■■■□ 3.87
CDKN2A-214ENST00000579755 ATP10BO94823 1461 aa39.24■■■■□ 3.87
CDKN2A-214ENST00000579755 CD109Q6YHK3 1445 aa39.23■■■■□ 3.87
CDKN2A-214ENST00000579755 RAPGEF6Q8TEU7 1601 aa39.21■■■■□ 3.87
CDKN2A-214ENST00000579755 FHOD3Q2V2M9 1422 aa39.19■■■■□ 3.86
CDKN2A-214ENST00000579755 CFAP43Q8NDM7 1665 aa39.16■■■■□ 3.86
CDKN2A-214ENST00000579755 EFCAB5A4FU69 1503 aa39.11■■■■□ 3.85
CDKN2A-214ENST00000579755 COL17A1Q9UMD9 1497 aaPredicted RBP39.11■■■■□ 3.85
CDKN2A-214ENST00000579755 MAGI3Q5TCQ9 1506 aa39.1■■■■□ 3.85
CDKN2A-214ENST00000579755 NUP153P49790 1475 aaKnown RBP39.03■■■■□ 3.84
CDKN2A-214ENST00000579755 KDM4FA0A1W2PPD8 638 aa38.99■■■■□ 3.83
CDKN2A-214ENST00000579755 PLEKHD1A6NEE1 506 aa38.98■■■■□ 3.83
CDKN2A-214ENST00000579755 ABCA9Q8IUA7 1624 aa38.92■■■■□ 3.82
CDKN2A-214ENST00000579755 ATP1B4Q9UN42 357 aaPredicted RBP38.9■■■■□ 3.82
CDKN2A-214ENST00000579755 PHLDB1Q86UU1 1377 aa38.83■■■■□ 3.81
CDKN2A-214ENST00000579755 FMN1Q68DA7 1419 aa38.82■■■■□ 3.81
CDKN2A-214ENST00000579755 ARHGAP35Q9NRY4 1499 aa38.79■■■■□ 3.8
CDKN2A-214ENST00000579755 ARAP3Q8WWN8 1544 aa38.79■■■■□ 3.8
CDKN2A-214ENST00000579755 ADGRL1O94910 1474 aa38.76■■■■□ 3.8
CDKN2A-214ENST00000579755 NEO1Q92859 1461 aa38.73■■■■□ 3.79
CDKN2A-214ENST00000579755 CDK13Q14004 1512 aaKnown RBP38.7■■■■□ 3.79
CDKN2A-214ENST00000579755 CDK11AQ9UQ88 783 aaPredicted RBP38.68■■■■□ 3.78
CDKN2A-214ENST00000579755 HECW1Q76N89 1606 aa38.67■■■■□ 3.78
CDKN2A-214ENST00000579755 RAPGEF3O95398 923 aa38.66■■■■□ 3.78
CDKN2A-214ENST00000579755 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.62■■■■□ 3.77
CDKN2A-214ENST00000579755 FANCAO15360 1455 aa38.55■■■■□ 3.76
CDKN2A-214ENST00000579755 AKNAQ7Z591 1439 aa38.54■■■■□ 3.76
CDKN2A-214ENST00000579755 TTC37Q6PGP7 1564 aa38.53■■■■□ 3.76
CDKN2A-214ENST00000579755 CFAP74Q9C0B2 1584 aa38.52■■■■□ 3.76
CDKN2A-214ENST00000579755 DENND4BO75064 1496 aaPredicted RBP38.49■■■■□ 3.75
CDKN2A-214ENST00000579755 PLCH2O75038 1416 aa38.43■■■■□ 3.74
CDKN2A-214ENST00000579755 CLIP1P30622 1438 aa38.43■■■■□ 3.74
CDKN2A-214ENST00000579755 ARID4BQ4LE39 1312 aaPredicted RBP38.4■■■■□ 3.74
CDKN2A-214ENST00000579755 TROQ12816 1431 aaPredicted RBP38.4■■■■□ 3.74
CDKN2A-214ENST00000579755 CASKIN1Q8WXD9 1431 aa38.4■■■■□ 3.74
CDKN2A-214ENST00000579755 FRMPD1Q5SYB0 1578 aa38.4■■■■□ 3.74
CDKN2A-214ENST00000579755 EFCAB2Q5VUJ9 269 aa38.39■■■■□ 3.74
CDKN2A-214ENST00000579755 KIF14Q15058 1648 aa38.37■■■■□ 3.73
CDKN2A-214ENST00000579755 CCDC18Q5T9S5 1454 aa38.35■■■■□ 3.73
CDKN2A-214ENST00000579755 PCF11O94913 1555 aaKnown RBP38.34■■■■□ 3.73
CDKN2A-214ENST00000579755 LRRIQ1Q96JM4 1722 aa38.34■■■■□ 3.73
CDKN2A-214ENST00000579755 RICTORQ6R327 1708 aa38.33■■■■□ 3.73
CDKN2A-214ENST00000579755 MYO5CQ9NQX4 1742 aa38.33■■■■□ 3.73
CDKN2A-214ENST00000579755 SCAPERQ9BY12 1400 aa38.31■■■■□ 3.72
CDKN2A-214ENST00000579755 FYCO1Q9BQS8 1478 aa38.25■■■■□ 3.71
CDKN2A-214ENST00000579755 ARHGAP5Q13017 1502 aa38.23■■■■□ 3.71
CDKN2A-214ENST00000579755 ARHGEF40Q8TER5 1519 aa38.22■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms