RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 KIF21BO75037 1637 aa25.48■■□□□ 1.67
SLC6A4-205ENST00000579221 EHMT2Q96KQ7 1210 aa25.48■■□□□ 1.67
SLC6A4-205ENST00000579221 UBTFP17480 764 aaKnown RBP25.45■■□□□ 1.66
SLC6A4-205ENST00000579221 GOLGA3Q08378 1498 aa25.42■■□□□ 1.66
SLC6A4-205ENST00000579221 ARHGEF11O15085 1522 aa25.42■■□□□ 1.66
SLC6A4-205ENST00000579221 IQGAP2Q13576 1575 aa25.4■■□□□ 1.66
SLC6A4-205ENST00000579221 PRG4Q92954 1404 aaPredicted RBP25.4■■□□□ 1.66
SLC6A4-205ENST00000579221 SHROOM2Q13796 1616 aa25.39■■□□□ 1.66
SLC6A4-205ENST00000579221 RIMBP3CA6NJZ7 1639 aa25.36■■□□□ 1.65
SLC6A4-205ENST00000579221 RIMBP3BA6NNM3 1639 aa25.36■■□□□ 1.65
SLC6A4-205ENST00000579221 RIMBP3Q9UFD9 1639 aa25.36■■□□□ 1.65
SLC6A4-205ENST00000579221 CTTNBP2Q8WZ74 1663 aa25.34■■□□□ 1.65
SLC6A4-205ENST00000579221 CARMIL2Q6F5E8 1435 aa25.32■■□□□ 1.64
SLC6A4-205ENST00000579221 UGGT2Q9NYU1 1516 aa25.29■■□□□ 1.64
SLC6A4-205ENST00000579221 CYB5RLQ6IPT4 315 aa25.29■■□□□ 1.64
SLC6A4-205ENST00000579221 ERCC6L2Q5T890 1561 aa25.28■■□□□ 1.64
SLC6A4-205ENST00000579221 RANGAP1P46060 587 aaPredicted RBP25.26■■□□□ 1.63
SLC6A4-205ENST00000579221 ARAP1Q96P48 1450 aa25.23■■□□□ 1.63
SLC6A4-205ENST00000579221 LOC105371045A0A1W2PR82 267 aa25.22■■□□□ 1.63
SLC6A4-205ENST00000579221 DISP1Q96F81 1524 aa25.22■■□□□ 1.63
SLC6A4-205ENST00000579221 TNIKQ9UKE5 1360 aa25.21■■□□□ 1.63
SLC6A4-205ENST00000579221 PTPRGP23470 1445 aa25.18■■□□□ 1.62
SLC6A4-205ENST00000579221 TTBK1Q5TCY1 1321 aaPredicted RBP25.17■■□□□ 1.62
SLC6A4-205ENST00000579221 P3H3Q8IVL6 736 aa25.17■■□□□ 1.62
SLC6A4-205ENST00000579221 KIAA0556O60303 1618 aa25.13■■□□□ 1.61
SLC6A4-205ENST00000579221 SAMD9Q5K651 1589 aa25.06■■□□□ 1.6
SLC6A4-205ENST00000579221 EFCAB5A4FU69 1503 aa25.06■■□□□ 1.6
SLC6A4-205ENST00000579221 FHOD3Q2V2M9 1422 aa25■■□□□ 1.59
SLC6A4-205ENST00000579221 NPM1P06748 294 aaKnown RBP eCLIP24.99■■□□□ 1.59
SLC6A4-205ENST00000579221 CLIP1P30622 1438 aa24.99■■□□□ 1.59
SLC6A4-205ENST00000579221 UACAQ9BZF9 1416 aa24.99■■□□□ 1.59
SLC6A4-205ENST00000579221 ARHGAP35Q9NRY4 1499 aa24.99■■□□□ 1.59
SLC6A4-205ENST00000579221 CEP162Q5TB80 1403 aa24.94■■□□□ 1.58
SLC6A4-205ENST00000579221 UHRF1BP1LA0JNW5 1464 aa24.92■■□□□ 1.58
SLC6A4-205ENST00000579221 PLB1Q6P1J6 1458 aa24.9■■□□□ 1.58
SLC6A4-205ENST00000579221 FMN1Q68DA7 1419 aa24.89■■□□□ 1.58
SLC6A4-205ENST00000579221 ABCC2Q92887 1545 aa24.87■■□□□ 1.57
SLC6A4-205ENST00000579221 ADCY10Q96PN6 1610 aa24.87■■□□□ 1.57
SLC6A4-205ENST00000579221 ABCA8O94911 1581 aa24.87■■□□□ 1.57
SLC6A4-205ENST00000579221 ATP1B4Q9UN42 357 aaPredicted RBP24.82■■□□□ 1.56
SLC6A4-205ENST00000579221 RAPGEF6Q8TEU7 1601 aa24.79■■□□□ 1.56
SLC6A4-205ENST00000579221 KDM5BQ9UGL1 1544 aa24.78■■□□□ 1.56
SLC6A4-205ENST00000579221 ARID3CA6NKF2 412 aa24.77■■□□□ 1.56
SLC6A4-205ENST00000579221 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.75■■□□□ 1.55
SLC6A4-205ENST00000579221 HNRNPUL2Q1KMD3 747 aaKnown RBP24.75■■□□□ 1.55
SLC6A4-205ENST00000579221 ATP10BO94823 1461 aa24.72■■□□□ 1.55
SLC6A4-205ENST00000579221 NUP153P49790 1475 aaKnown RBP24.71■■□□□ 1.55
SLC6A4-205ENST00000579221 CASKIN1Q8WXD9 1431 aa24.7■■□□□ 1.55
SLC6A4-205ENST00000579221 TRHP20396 242 aaPredicted RBP24.69■■□□□ 1.54
SLC6A4-205ENST00000579221 MAPKBP1O60336 1514 aa24.69■■□□□ 1.54
SLC6A4-205ENST00000579221 ZCCHC11Q5TAX3 1644 aaKnown RBP24.68■■□□□ 1.54
SLC6A4-205ENST00000579221 ASXL2Q76L83 1435 aa24.67■■□□□ 1.54
SLC6A4-205ENST00000579221 HECW1Q76N89 1606 aa24.65■■□□□ 1.54
SLC6A4-205ENST00000579221 PLEKHD1A6NEE1 506 aa24.65■■□□□ 1.54
SLC6A4-205ENST00000579221 FYCO1Q9BQS8 1478 aa24.64■■□□□ 1.53
SLC6A4-205ENST00000579221 CDK11AQ9UQ88 783 aaPredicted RBP24.63■■□□□ 1.53
SLC6A4-205ENST00000579221 VPS8Q8N3P4 1428 aa24.62■■□□□ 1.53
SLC6A4-205ENST00000579221 EPRSP07814 1512 aaKnown RBP24.61■■□□□ 1.53
SLC6A4-205ENST00000579221 PCF11O94913 1555 aaKnown RBP24.61■■□□□ 1.53
SLC6A4-205ENST00000579221 FAM69CQ0P6D2 419 aa24.6■■□□□ 1.53
SLC6A4-205ENST00000579221 KCNH8Q96L42 1107 aa24.6■■□□□ 1.53
SLC6A4-205ENST00000579221 ABCC10Q5T3U5 1492 aa24.58■■□□□ 1.52
SLC6A4-205ENST00000579221 WDR7Q9Y4E6 1490 aa24.58■■□□□ 1.52
SLC6A4-205ENST00000579221 CCDC18Q5T9S5 1454 aa24.57■■□□□ 1.52
SLC6A4-205ENST00000579221 CDK13Q14004 1512 aaKnown RBP24.56■■□□□ 1.52
SLC6A4-205ENST00000579221 APLP2Q06481 763 aa24.49■■□□□ 1.51
SLC6A4-205ENST00000579221 DIP2BQ9P265 1576 aa24.46■■□□□ 1.51
SLC6A4-205ENST00000579221 LRRIQ1Q96JM4 1722 aa24.45■■□□□ 1.5
SLC6A4-205ENST00000579221 GLI2P10070 1586 aa24.45■■□□□ 1.5
SLC6A4-205ENST00000579221 TROQ12816 1431 aaPredicted RBP24.44■■□□□ 1.5
SLC6A4-205ENST00000579221 MTUS2Q5JR59 1369 aa24.4■■□□□ 1.5
SLC6A4-205ENST00000579221 KIF13AQ9H1H9 1805 aa24.39■■□□□ 1.49
SLC6A4-205ENST00000579221 CD109Q6YHK3 1445 aa24.37■■□□□ 1.49
SLC6A4-205ENST00000579221 MAP3K1Q13233 1512 aa24.36■■□□□ 1.49
SLC6A4-205ENST00000579221 TIAM1Q13009 1591 aa24.34■■□□□ 1.49
SLC6A4-205ENST00000579221 MAGI3Q5TCQ9 1506 aa24.34■■□□□ 1.49
SLC6A4-205ENST00000579221 ABCA9Q8IUA7 1624 aa24.31■■□□□ 1.48
SLC6A4-205ENST00000579221 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.3■■□□□ 1.48
SLC6A4-205ENST00000579221 KANK4Q5T7N3 995 aaPredicted RBP24.3■■□□□ 1.48
SLC6A4-205ENST00000579221 MAP3K4Q9Y6R4 1608 aa24.3■■□□□ 1.48
SLC6A4-205ENST00000579221 KIF14Q15058 1648 aa24.29■■□□□ 1.48
SLC6A4-205ENST00000579221 CFAP43Q8NDM7 1665 aa24.29■■□□□ 1.48
SLC6A4-205ENST00000579221 LRRC9Q6ZRR7 1453 aa24.28■■□□□ 1.48
SLC6A4-205ENST00000579221 EHBP1L1Q8N3D4 1523 aa24.27■■□□□ 1.48
SLC6A4-205ENST00000579221 TEX14Q8IWB6 1497 aa24.26■■□□□ 1.47
SLC6A4-205ENST00000579221 TSPOAP1O95153 1857 aa24.24■■□□□ 1.47
SLC6A4-205ENST00000579221 PLCH2O75038 1416 aa24.23■■□□□ 1.47
SLC6A4-205ENST00000579221 TTC37Q6PGP7 1564 aa24.21■■□□□ 1.47
SLC6A4-205ENST00000579221 EFCAB2Q5VUJ9 269 aa24.21■■□□□ 1.47
SLC6A4-205ENST00000579221 CCNB3Q8WWL7 1395 aa24.2■■□□□ 1.46
SLC6A4-205ENST00000579221 PHLDB1Q86UU1 1377 aa24.18■■□□□ 1.46
SLC6A4-205ENST00000579221 PPRC1Q5VV67 1664 aaKnown RBP24.17■■□□□ 1.46
SLC6A4-205ENST00000579221 NCOA2Q15596 1464 aa24.16■■□□□ 1.46
SLC6A4-205ENST00000579221 SUPT6HQ7KZ85 1726 aaKnown RBP24.15■■□□□ 1.46
SLC6A4-205ENST00000579221 FANCAO15360 1455 aa24.14■■□□□ 1.46
SLC6A4-205ENST00000579221 CFDP1Q9UEE9 299 aaPredicted RBP24.14■■□□□ 1.45
SLC6A4-205ENST00000579221 GPATCH8Q9UKJ3 1502 aaKnown RBP24.14■■□□□ 1.45
SLC6A4-205ENST00000579221 NEO1Q92859 1461 aa24.13■■□□□ 1.45
SLC6A4-205ENST00000579221 ARAP3Q8WWN8 1544 aa24.13■■□□□ 1.45
SLC6A4-205ENST00000579221 MYO5CQ9NQX4 1742 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms