RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 IGF1RP08069 1367 aa15.96■□□□□ 0.15
CDK5RAP3-211ENST00000578996 CUL7Q14999 1698 aa15.94■□□□□ 0.14
CDK5RAP3-211ENST00000578996 KIAA0586Q9BVV6 1533 aa15.89■□□□□ 0.13
CDK5RAP3-211ENST00000578996 CARMIL1Q5VZK9 1371 aa15.88■□□□□ 0.13
CDK5RAP3-211ENST00000578996 TTBK1Q5TCY1 1321 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-211ENST00000578996 NPM1P06748 294 aaKnown RBP eCLIP15.83■□□□□ 0.12
CDK5RAP3-211ENST00000578996 ADCY10Q96PN6 1610 aa15.78■□□□□ 0.12
CDK5RAP3-211ENST00000578996 IQGAP2Q13576 1575 aa15.77■□□□□ 0.11
CDK5RAP3-211ENST00000578996 CARMIL2Q6F5E8 1435 aa15.76■□□□□ 0.11
CDK5RAP3-211ENST00000578996 KIF13AQ9H1H9 1805 aa15.75■□□□□ 0.11
CDK5RAP3-211ENST00000578996 FAM69CQ0P6D2 419 aa15.75■□□□□ 0.11
CDK5RAP3-211ENST00000578996 RAPGEF2Q9Y4G8 1499 aa15.75■□□□□ 0.11
CDK5RAP3-211ENST00000578996 PTPRGP23470 1445 aa15.75■□□□□ 0.11
CDK5RAP3-211ENST00000578996 MAPKBP1O60336 1514 aa15.73■□□□□ 0.11
CDK5RAP3-211ENST00000578996 TNIKQ9UKE5 1360 aa15.73■□□□□ 0.11
CDK5RAP3-211ENST00000578996 ABCC10Q5T3U5 1492 aa15.71■□□□□ 0.11
CDK5RAP3-211ENST00000578996 AEBP2Q6ZN18 517 aaPredicted RBP15.69■□□□□ 0.1
CDK5RAP3-211ENST00000578996 DIP2BQ9P265 1576 aa15.69■□□□□ 0.1
CDK5RAP3-211ENST00000578996 DISP1Q96F81 1524 aa15.67■□□□□ 0.1
CDK5RAP3-211ENST00000578996 ABCC2Q92887 1545 aa15.64■□□□□ 0.09
CDK5RAP3-211ENST00000578996 UGGT2Q9NYU1 1516 aa15.64■□□□□ 0.09
CDK5RAP3-211ENST00000578996 UACAQ9BZF9 1416 aa15.62■□□□□ 0.09
CDK5RAP3-211ENST00000578996 KIAA0556O60303 1618 aa15.62■□□□□ 0.09
CDK5RAP3-211ENST00000578996 CTTNBP2Q8WZ74 1663 aa15.6■□□□□ 0.09
CDK5RAP3-211ENST00000578996 UHRF1BP1LA0JNW5 1464 aa15.6■□□□□ 0.09
CDK5RAP3-211ENST00000578996 ASXL2Q76L83 1435 aa15.6■□□□□ 0.09
CDK5RAP3-211ENST00000578996 TSPOAP1O95153 1857 aa15.59■□□□□ 0.09
CDK5RAP3-211ENST00000578996 PLB1Q6P1J6 1458 aa15.57■□□□□ 0.08
CDK5RAP3-211ENST00000578996 PRXQ9BXM0 1461 aa15.57■□□□□ 0.08
CDK5RAP3-211ENST00000578996 KDM6BO15054 1643 aa15.57■□□□□ 0.08
CDK5RAP3-211ENST00000578996 GOLGA3Q08378 1498 aa15.54■□□□□ 0.08
CDK5RAP3-211ENST00000578996 ZCCHC11Q5TAX3 1644 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-211ENST00000578996 KDM5BQ9UGL1 1544 aa15.53■□□□□ 0.08
CDK5RAP3-211ENST00000578996 GLI2P10070 1586 aa15.5■□□□□ 0.07
CDK5RAP3-211ENST00000578996 CSRNP3Q8WYN3 585 aa15.5■□□□□ 0.07
CDK5RAP3-211ENST00000578996 EPRSP07814 1512 aaKnown RBP15.49■□□□□ 0.07
CDK5RAP3-211ENST00000578996 P3H3Q8IVL6 736 aa15.49■□□□□ 0.07
CDK5RAP3-211ENST00000578996 FAM9AQ8IZU1 332 aaPredicted RBP15.47■□□□□ 0.07
CDK5RAP3-211ENST00000578996 WDR7Q9Y4E6 1490 aa15.46■□□□□ 0.06
CDK5RAP3-211ENST00000578996 PPRC1Q5VV67 1664 aaKnown RBP15.45■□□□□ 0.06
CDK5RAP3-211ENST00000578996 RANGAP1P46060 587 aaPredicted RBP15.45■□□□□ 0.06
CDK5RAP3-211ENST00000578996 ABCA8O94911 1581 aa15.45■□□□□ 0.06
CDK5RAP3-211ENST00000578996 ARID3CA6NKF2 412 aa15.44■□□□□ 0.06
CDK5RAP3-211ENST00000578996 MAP3K4Q9Y6R4 1608 aa15.43■□□□□ 0.06
CDK5RAP3-211ENST00000578996 KCNH8Q96L42 1107 aa15.43■□□□□ 0.06
CDK5RAP3-211ENST00000578996 EEA1Q15075 1411 aa15.43■□□□□ 0.06
CDK5RAP3-211ENST00000578996 TEX14Q8IWB6 1497 aa15.41■□□□□ 0.06
CDK5RAP3-211ENST00000578996 SAMD9Q5K651 1589 aa15.37■□□□□ 0.05
CDK5RAP3-211ENST00000578996 CD109Q6YHK3 1445 aa15.36■□□□□ 0.05
CDK5RAP3-211ENST00000578996 COL17A1Q9UMD9 1497 aaPredicted RBP15.36■□□□□ 0.05
CDK5RAP3-211ENST00000578996 KDM4FA0A1W2PPD8 638 aa15.36■□□□□ 0.05
CDK5RAP3-211ENST00000578996 EHMT2Q96KQ7 1210 aa15.36■□□□□ 0.05
CDK5RAP3-211ENST00000578996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.35■□□□□ 0.05
CDK5RAP3-211ENST00000578996 HNRNPUL2Q1KMD3 747 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP3-211ENST00000578996 CFAP43Q8NDM7 1665 aa15.34■□□□□ 0.05
CDK5RAP3-211ENST00000578996 ATP10BO94823 1461 aa15.33■□□□□ 0.05
CDK5RAP3-211ENST00000578996 FHOD3Q2V2M9 1422 aa15.33■□□□□ 0.04
CDK5RAP3-211ENST00000578996 RAPGEF6Q8TEU7 1601 aa15.32■□□□□ 0.04
CDK5RAP3-211ENST00000578996 MAGI3Q5TCQ9 1506 aa15.31■□□□□ 0.04
CDK5RAP3-211ENST00000578996 KIF21BO75037 1637 aa15.31■□□□□ 0.04
CDK5RAP3-211ENST00000578996 CHIC1Q5VXU3 224 aa15.28■□□□□ 0.04
CDK5RAP3-211ENST00000578996 ADGRL1O94910 1474 aa15.27■□□□□ 0.04
CDK5RAP3-211ENST00000578996 UBTFP17480 764 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP3-211ENST00000578996 NUP153P49790 1475 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-211ENST00000578996 EFCAB5A4FU69 1503 aa15.24■□□□□ 0.03
CDK5RAP3-211ENST00000578996 ABCA9Q8IUA7 1624 aa15.23■□□□□ 0.03
CDK5RAP3-211ENST00000578996 PLEKHD1A6NEE1 506 aa15.2■□□□□ 0.02
CDK5RAP3-211ENST00000578996 ATP1B4Q9UN42 357 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-211ENST00000578996 ARAP3Q8WWN8 1544 aa15.18■□□□□ 0.02
CDK5RAP3-211ENST00000578996 PHLDB1Q86UU1 1377 aa15.15■□□□□ 0.02
CDK5RAP3-211ENST00000578996 RAPGEF3O95398 923 aa15.15■□□□□ 0.02
CDK5RAP3-211ENST00000578996 CDK13Q14004 1512 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-211ENST00000578996 NEO1Q92859 1461 aa15.14■□□□□ 0.01
CDK5RAP3-211ENST00000578996 FMN1Q68DA7 1419 aa15.13■□□□□ 0.01
CDK5RAP3-211ENST00000578996 ARHGAP35Q9NRY4 1499 aa15.13■□□□□ 0.01
CDK5RAP3-211ENST00000578996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.12■□□□□ 0.01
CDK5RAP3-211ENST00000578996 HECW1Q76N89 1606 aa15.11■□□□□ 0.01
CDK5RAP3-211ENST00000578996 TTC37Q6PGP7 1564 aa15.1■□□□□ 0.01
CDK5RAP3-211ENST00000578996 FANCAO15360 1455 aa15.09■□□□□ 0.01
CDK5RAP3-211ENST00000578996 FRMPD1Q5SYB0 1578 aa15.08■□□□□ 0
CDK5RAP3-211ENST00000578996 AKNAQ7Z591 1439 aa15.08■□□□□ 0
CDK5RAP3-211ENST00000578996 CFAP74Q9C0B2 1584 aa15.07■□□□□ 0
CDK5RAP3-211ENST00000578996 ARID4BQ4LE39 1312 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-211ENST00000578996 DENND4BO75064 1496 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-211ENST00000578996 CDK11AQ9UQ88 783 aaPredicted RBP15.05■□□□□ -0
CDK5RAP3-211ENST00000578996 HECW2Q9P2P5 1572 aa15.04■□□□□ -0
CDK5RAP3-211ENST00000578996 RICTORQ6R327 1708 aa15.02□□□□□ -0.01
CDK5RAP3-211ENST00000578996 KIF14Q15058 1648 aa15.01□□□□□ -0.01
CDK5RAP3-211ENST00000578996 ARHGEF40Q8TER5 1519 aa15.01□□□□□ -0.01
CDK5RAP3-211ENST00000578996 PLCH2O75038 1416 aa15□□□□□ -0.01
CDK5RAP3-211ENST00000578996 CLIP1P30622 1438 aa15□□□□□ -0.01
CDK5RAP3-211ENST00000578996 PCF11O94913 1555 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-211ENST00000578996 TROQ12816 1431 aaPredicted RBP14.99□□□□□ -0.01
CDK5RAP3-211ENST00000578996 SCAPERQ9BY12 1400 aa14.99□□□□□ -0.01
CDK5RAP3-211ENST00000578996 MYO5CQ9NQX4 1742 aa14.98□□□□□ -0.01
CDK5RAP3-211ENST00000578996 BCORL1Q5H9F3 1711 aa14.97□□□□□ -0.01
CDK5RAP3-211ENST00000578996 LRRIQ1Q96JM4 1722 aa14.97□□□□□ -0.01
CDK5RAP3-211ENST00000578996 ZFYVE16Q7Z3T8 1539 aa14.97□□□□□ -0.01
CDK5RAP3-211ENST00000578996 ADAMTSL3P82987 1691 aa14.97□□□□□ -0.01
CDK5RAP3-211ENST00000578996 PTPRMP28827 1452 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms