RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 CUL7Q14999 1698 aa30.2■■■□□ 2.42
SLC9A3R1-203ENST00000578958 RUSC2Q8N2Y8 1516 aa30.17■■■□□ 2.42
SLC9A3R1-203ENST00000578958 CARMIL1Q5VZK9 1371 aa30.12■■■□□ 2.41
SLC9A3R1-203ENST00000578958 KIAA0586Q9BVV6 1533 aa30.11■■■□□ 2.41
SLC9A3R1-203ENST00000578958 NPM1P06748 294 aaKnown RBP eCLIP30.04■■■□□ 2.4
SLC9A3R1-203ENST00000578958 TTBK1Q5TCY1 1321 aaPredicted RBP29.91■■■□□ 2.38
SLC9A3R1-203ENST00000578958 CARMIL2Q6F5E8 1435 aa29.88■■■□□ 2.37
SLC9A3R1-203ENST00000578958 PTPRGP23470 1445 aa29.85■■■□□ 2.37
SLC9A3R1-203ENST00000578958 RAPGEF2Q9Y4G8 1499 aa29.85■■■□□ 2.37
SLC9A3R1-203ENST00000578958 IQGAP2Q13576 1575 aa29.84■■■□□ 2.37
SLC9A3R1-203ENST00000578958 ADCY10Q96PN6 1610 aa29.81■■■□□ 2.36
SLC9A3R1-203ENST00000578958 FAM69CQ0P6D2 419 aa29.8■■■□□ 2.36
SLC9A3R1-203ENST00000578958 TNIKQ9UKE5 1360 aa29.79■■■□□ 2.36
SLC9A3R1-203ENST00000578958 MAPKBP1O60336 1514 aa29.75■■■□□ 2.35
SLC9A3R1-203ENST00000578958 KIF13AQ9H1H9 1805 aa29.73■■■□□ 2.35
SLC9A3R1-203ENST00000578958 ABCC10Q5T3U5 1492 aa29.73■■■□□ 2.35
SLC9A3R1-203ENST00000578958 DISP1Q96F81 1524 aa29.64■■■□□ 2.34
SLC9A3R1-203ENST00000578958 UGGT2Q9NYU1 1516 aa29.63■■■□□ 2.33
SLC9A3R1-203ENST00000578958 DIP2BQ9P265 1576 aa29.61■■■□□ 2.33
SLC9A3R1-203ENST00000578958 AEBP2Q6ZN18 517 aaPredicted RBP29.61■■■□□ 2.33
SLC9A3R1-203ENST00000578958 ABCC2Q92887 1545 aa29.61■■■□□ 2.33
SLC9A3R1-203ENST00000578958 UACAQ9BZF9 1416 aa29.6■■■□□ 2.33
SLC9A3R1-203ENST00000578958 UHRF1BP1LA0JNW5 1464 aa29.55■■■□□ 2.32
SLC9A3R1-203ENST00000578958 KIAA0556O60303 1618 aa29.54■■■□□ 2.32
SLC9A3R1-203ENST00000578958 CTTNBP2Q8WZ74 1663 aa29.53■■■□□ 2.32
SLC9A3R1-203ENST00000578958 PRXQ9BXM0 1461 aa29.53■■■□□ 2.32
SLC9A3R1-203ENST00000578958 PLB1Q6P1J6 1458 aa29.5■■■□□ 2.31
SLC9A3R1-203ENST00000578958 ASXL2Q76L83 1435 aa29.5■■■□□ 2.31
SLC9A3R1-203ENST00000578958 GOLGA3Q08378 1498 aa29.49■■■□□ 2.31
SLC9A3R1-203ENST00000578958 CSRNP3Q8WYN3 585 aa29.47■■■□□ 2.31
SLC9A3R1-203ENST00000578958 FAM9AQ8IZU1 332 aaPredicted RBP29.46■■■□□ 2.31
SLC9A3R1-203ENST00000578958 TSPOAP1O95153 1857 aa29.45■■■□□ 2.31
SLC9A3R1-203ENST00000578958 KDM5BQ9UGL1 1544 aa29.4■■■□□ 2.3
SLC9A3R1-203ENST00000578958 KDM6BO15054 1643 aa29.38■■■□□ 2.29
SLC9A3R1-203ENST00000578958 ZCCHC11Q5TAX3 1644 aaKnown RBP29.35■■■□□ 2.29
SLC9A3R1-203ENST00000578958 EEA1Q15075 1411 aa29.35■■■□□ 2.29
SLC9A3R1-203ENST00000578958 GLI2P10070 1586 aa29.34■■■□□ 2.29
SLC9A3R1-203ENST00000578958 P3H3Q8IVL6 736 aa29.32■■■□□ 2.28
SLC9A3R1-203ENST00000578958 EPRSP07814 1512 aaKnown RBP29.3■■■□□ 2.28
SLC9A3R1-203ENST00000578958 WDR7Q9Y4E6 1490 aa29.24■■■□□ 2.27
SLC9A3R1-203ENST00000578958 ABCA8O94911 1581 aa29.24■■■□□ 2.27
SLC9A3R1-203ENST00000578958 RANGAP1P46060 587 aaPredicted RBP29.22■■■□□ 2.27
SLC9A3R1-203ENST00000578958 KCNH8Q96L42 1107 aa29.21■■■□□ 2.27
SLC9A3R1-203ENST00000578958 TEX14Q8IWB6 1497 aa29.19■■■□□ 2.26
SLC9A3R1-203ENST00000578958 ARID3CA6NKF2 412 aa29.18■■■□□ 2.26
SLC9A3R1-203ENST00000578958 PPRC1Q5VV67 1664 aaKnown RBP29.17■■■□□ 2.26
SLC9A3R1-203ENST00000578958 MAP3K4Q9Y6R4 1608 aa29.16■■■□□ 2.26
SLC9A3R1-203ENST00000578958 SAMD9Q5K651 1589 aa29.1■■■□□ 2.25
SLC9A3R1-203ENST00000578958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.09■■■□□ 2.25
SLC9A3R1-203ENST00000578958 HNRNPUL2Q1KMD3 747 aaKnown RBP29.09■■■□□ 2.25
SLC9A3R1-203ENST00000578958 CD109Q6YHK3 1445 aa29.09■■■□□ 2.25
SLC9A3R1-203ENST00000578958 CHIC1Q5VXU3 224 aa29.06■■■□□ 2.24
SLC9A3R1-203ENST00000578958 ATP10BO94823 1461 aa29.04■■■□□ 2.24
SLC9A3R1-203ENST00000578958 EHMT2Q96KQ7 1210 aa29.03■■■□□ 2.24
SLC9A3R1-203ENST00000578958 KIF21BO75037 1637 aa29.02■■■□□ 2.24
SLC9A3R1-203ENST00000578958 CFAP43Q8NDM7 1665 aa29.02■■■□□ 2.24
SLC9A3R1-203ENST00000578958 COL17A1Q9UMD9 1497 aaPredicted RBP29■■■□□ 2.23
SLC9A3R1-203ENST00000578958 UBTFP17480 764 aaKnown RBP29■■■□□ 2.23
SLC9A3R1-203ENST00000578958 RAPGEF6Q8TEU7 1601 aa29■■■□□ 2.23
SLC9A3R1-203ENST00000578958 FHOD3Q2V2M9 1422 aa29■■■□□ 2.23
SLC9A3R1-203ENST00000578958 MAGI3Q5TCQ9 1506 aa28.99■■■□□ 2.23
SLC9A3R1-203ENST00000578958 KDM4FA0A1W2PPD8 638 aa28.98■■■□□ 2.23
SLC9A3R1-203ENST00000578958 EFCAB5A4FU69 1503 aa28.91■■■□□ 2.22
SLC9A3R1-203ENST00000578958 NUP153P49790 1475 aaKnown RBP28.88■■■□□ 2.21
SLC9A3R1-203ENST00000578958 PLEKHD1A6NEE1 506 aa28.87■■■□□ 2.21
SLC9A3R1-203ENST00000578958 ABCA9Q8IUA7 1624 aa28.81■■■□□ 2.2
SLC9A3R1-203ENST00000578958 ADGRL1O94910 1474 aa28.81■■■□□ 2.2
SLC9A3R1-203ENST00000578958 ATP1B4Q9UN42 357 aaPredicted RBP28.8■■■□□ 2.2
SLC9A3R1-203ENST00000578958 PHLDB1Q86UU1 1377 aa28.78■■■□□ 2.2
SLC9A3R1-203ENST00000578958 ARAP3Q8WWN8 1544 aa28.75■■■□□ 2.19
SLC9A3R1-203ENST00000578958 FMN1Q68DA7 1419 aa28.72■■■□□ 2.19
SLC9A3R1-203ENST00000578958 NEO1Q92859 1461 aa28.71■■■□□ 2.19
SLC9A3R1-203ENST00000578958 RAPGEF3O95398 923 aa28.67■■■□□ 2.18
SLC9A3R1-203ENST00000578958 ARHGAP35Q9NRY4 1499 aa28.66■■■□□ 2.18
SLC9A3R1-203ENST00000578958 CDK13Q14004 1512 aaKnown RBP28.64■■■□□ 2.18
SLC9A3R1-203ENST00000578958 CDK11AQ9UQ88 783 aaPredicted RBP28.63■■■□□ 2.17
SLC9A3R1-203ENST00000578958 HECW1Q76N89 1606 aa28.61■■■□□ 2.17
SLC9A3R1-203ENST00000578958 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.59■■■□□ 2.17
SLC9A3R1-203ENST00000578958 FANCAO15360 1455 aa28.57■■■□□ 2.16
SLC9A3R1-203ENST00000578958 AKNAQ7Z591 1439 aa28.55■■■□□ 2.16
SLC9A3R1-203ENST00000578958 CFAP74Q9C0B2 1584 aa28.54■■■□□ 2.16
SLC9A3R1-203ENST00000578958 DENND4BO75064 1496 aaPredicted RBP28.53■■■□□ 2.16
SLC9A3R1-203ENST00000578958 TTC37Q6PGP7 1564 aa28.53■■■□□ 2.16
SLC9A3R1-203ENST00000578958 ARID4BQ4LE39 1312 aaPredicted RBP28.51■■■□□ 2.15
SLC9A3R1-203ENST00000578958 CLIP1P30622 1438 aa28.46■■■□□ 2.15
SLC9A3R1-203ENST00000578958 FRMPD1Q5SYB0 1578 aa28.45■■■□□ 2.15
SLC9A3R1-203ENST00000578958 PLCH2O75038 1416 aa28.45■■■□□ 2.15
SLC9A3R1-203ENST00000578958 EFCAB2Q5VUJ9 269 aa28.43■■■□□ 2.14
SLC9A3R1-203ENST00000578958 TROQ12816 1431 aaPredicted RBP28.42■■■□□ 2.14
SLC9A3R1-203ENST00000578958 KIF14Q15058 1648 aa28.4■■■□□ 2.14
SLC9A3R1-203ENST00000578958 RICTORQ6R327 1708 aa28.39■■■□□ 2.14
SLC9A3R1-203ENST00000578958 CASKIN1Q8WXD9 1431 aa28.38■■■□□ 2.13
SLC9A3R1-203ENST00000578958 SCAPERQ9BY12 1400 aa28.38■■■□□ 2.13
SLC9A3R1-203ENST00000578958 CCDC18Q5T9S5 1454 aa28.36■■■□□ 2.13
SLC9A3R1-203ENST00000578958 MYO5CQ9NQX4 1742 aa28.36■■■□□ 2.13
SLC9A3R1-203ENST00000578958 ARHGEF40Q8TER5 1519 aa28.35■■■□□ 2.13
SLC9A3R1-203ENST00000578958 PCF11O94913 1555 aaKnown RBP28.33■■■□□ 2.13
SLC9A3R1-203ENST00000578958 HECW2Q9P2P5 1572 aa28.33■■■□□ 2.12
SLC9A3R1-203ENST00000578958 MAGI2Q86UL8 1455 aa28.31■■■□□ 2.12
SLC9A3R1-203ENST00000578958 ARHGAP5Q13017 1502 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms