RNA–Protein interactions for RNA: ENST00000578593.1

DDX42-207, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 2,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-207ENST00000578593 TULP1O00294 542 aaPredicted RBP10.52□□□□□ -0.73
DDX42-207ENST00000578593 HOMEZQ8IX15 550 aa10.51□□□□□ -0.73
DDX42-207ENST00000578593 TNIKQ9UKE5 1360 aa10.51□□□□□ -0.73
DDX42-207ENST00000578593 SMARCA2P51531 1590 aa10.48□□□□□ -0.73
DDX42-207ENST00000578593 TOP2AP11388 1531 aaKnown RBP10.48□□□□□ -0.73
DDX42-207ENST00000578593 DHX37Q8IY37 1157 aaKnown RBP10.48□□□□□ -0.73
DDX42-207ENST00000578593 CHMP4AQ9BY43 222 aa10.47□□□□□ -0.73
DDX42-207ENST00000578593 SOGA1O94964 1423 aa10.47□□□□□ -0.73
DDX42-207ENST00000578593 BCANQ96GW7 911 aa10.46□□□□□ -0.73
DDX42-207ENST00000578593 PAXIP1Q6ZW49 1069 aaPredicted RBP10.46□□□□□ -0.74
DDX42-207ENST00000578593 RUSC2Q8N2Y8 1516 aa10.46□□□□□ -0.74
DDX42-207ENST00000578593 UBTFP17480 764 aaKnown RBP10.45□□□□□ -0.74
DDX42-207ENST00000578593 DNAJC5Q9H3Z4 198 aa10.44□□□□□ -0.74
DDX42-207ENST00000578593 SMARCA4P51532 1647 aa10.44□□□□□ -0.74
DDX42-207ENST00000578593 BRD2P25440 801 aaKnown RBP10.42□□□□□ -0.74
DDX42-207ENST00000578593 RSPH4AQ5TD94 716 aa10.42□□□□□ -0.74
DDX42-207ENST00000578593 KCNH8Q96L42 1107 aa10.39□□□□□ -0.75
DDX42-207ENST00000578593 FKBP8Q14318 412 aa10.39□□□□□ -0.75
DDX42-207ENST00000578593 SAMD1Q6SPF0 538 aaPredicted RBP10.37□□□□□ -0.75
DDX42-207ENST00000578593 GOLGA3Q08378 1498 aa10.37□□□□□ -0.75
DDX42-207ENST00000578593 DHX57Q6P158 1386 aaKnown RBP10.36□□□□□ -0.75
DDX42-207ENST00000578593 NPM2Q86SE8 214 aaKnown RBP10.35□□□□□ -0.75
DDX42-207ENST00000578593 EEA1Q15075 1411 aa10.35□□□□□ -0.75
DDX42-207ENST00000578593 C11orf95C9JLR9 678 aaPredicted RBP10.35□□□□□ -0.75
DDX42-207ENST00000578593 NBR1Q14596 966 aa10.35□□□□□ -0.75
DDX42-207ENST00000578593 NAP1L5Q96NT1 182 aaPredicted RBP10.34□□□□□ -0.75
DDX42-207ENST00000578593 NAP1L2Q9ULW6 460 aaPredicted RBP10.34□□□□□ -0.75
DDX42-207ENST00000578593 HAP1P54257 671 aaPredicted RBP10.33□□□□□ -0.76
DDX42-207ENST00000578593 ZNF326Q5BKZ1 582 aaKnown RBP10.33□□□□□ -0.76
DDX42-207ENST00000578593 KIF21BO75037 1637 aa10.31□□□□□ -0.76
DDX42-207ENST00000578593 CLIP1P30622 1438 aa10.31□□□□□ -0.76
DDX42-207ENST00000578593 SYNJ1O43426 1573 aa10.31□□□□□ -0.76
DDX42-207ENST00000578593 ITGAEP38570 1179 aa10.3□□□□□ -0.76
DDX42-207ENST00000578593 VPS8Q8N3P4 1428 aa10.3□□□□□ -0.76
DDX42-207ENST00000578593 RTL5Q5HYW3 569 aaPredicted RBP10.26□□□□□ -0.77
DDX42-207ENST00000578593 CHMP4BQ9H444 224 aaKnown RBP10.26□□□□□ -0.77
DDX42-207ENST00000578593 C14orf37Q86TY3 774 aa10.25□□□□□ -0.77
DDX42-207ENST00000578593 CEP164Q9UPV0 1460 aa10.25□□□□□ -0.77
DDX42-207ENST00000578593 BBXQ8WY36 941 aaPredicted RBP10.24□□□□□ -0.77
DDX42-207ENST00000578593 NOP58Q9Y2X3 529 aaKnown RBP10.23□□□□□ -0.77
DDX42-207ENST00000578593 PEG3Q9GZU2 1588 aa10.22□□□□□ -0.77
DDX42-207ENST00000578593 WASHC2CQ9Y4E1 1318 aa10.21□□□□□ -0.77
DDX42-207ENST00000578593 RRP9O43818 475 aaKnown RBP10.21□□□□□ -0.77
DDX42-207ENST00000578593 HSP90AA2PQ14568 343 aaPredicted RBP10.21□□□□□ -0.77
DDX42-207ENST00000578593 IPO4Q8TEX9 1081 aaKnown RBP10.21□□□□□ -0.77
DDX42-207ENST00000578593 TRIM52Q96A61 297 aa10.21□□□□□ -0.77
DDX42-207ENST00000578593 GTF2E1P29083 439 aaPredicted RBP10.2□□□□□ -0.78
DDX42-207ENST00000578593 DDX10Q13206 875 aaKnown RBP10.2□□□□□ -0.78
DDX42-207ENST00000578593 PRDM4Q9UKN5 801 aa10.2□□□□□ -0.78
DDX42-207ENST00000578593 BRPF3Q9ULD4 1205 aa10.2□□□□□ -0.78
DDX42-207ENST00000578593 RAPGEF2Q9Y4G8 1499 aa10.2□□□□□ -0.78
DDX42-207ENST00000578593 WASHC2AQ641Q2 1341 aa10.19□□□□□ -0.78
DDX42-207ENST00000578593 CNKSR2Q8WXI2 1034 aa10.19□□□□□ -0.78
DDX42-207ENST00000578593 BAZ1BQ9UIG0 1483 aaKnown RBP10.18□□□□□ -0.78
DDX42-207ENST00000578593 PAK3O75914 559 aaPredicted RBP10.17□□□□□ -0.78
DDX42-207ENST00000578593 ZFP91Q96JP5 570 aaPredicted RBP10.17□□□□□ -0.78
DDX42-207ENST00000578593 ERCC6Q03468 1493 aa10.17□□□□□ -0.78
DDX42-207ENST00000578593 IRX6P78412 446 aaPredicted RBP10.15□□□□□ -0.78
DDX42-207ENST00000578593 KANK4Q5T7N3 995 aaPredicted RBP10.14□□□□□ -0.79
DDX42-207ENST00000578593 FAM43AQ8N2R8 423 aa10.13□□□□□ -0.79
DDX42-207ENST00000578593 STAC3Q96MF2 364 aa10.13□□□□□ -0.79
DDX42-207ENST00000578593 BCCIPQ9P287 314 aaKnown RBP eCLIP10.13□□□□□ -0.79
DDX42-207ENST00000578593 CDK11AQ9UQ88 783 aaPredicted RBP10.13□□□□□ -0.79
DDX42-207ENST00000578593 CUX2O14529 1486 aa10.13□□□□□ -0.79
DDX42-207ENST00000578593 AMER1Q5JTC6 1135 aaPredicted RBP10.13□□□□□ -0.79
DDX42-207ENST00000578593 PPP1R15AO75807 674 aaPredicted RBP10.13□□□□□ -0.79
DDX42-207ENST00000578593 TAOK2Q9UL54 1235 aa10.13□□□□□ -0.79
DDX42-207ENST00000578593 RRBP1Q9P2E9 1410 aaKnown RBP10.12□□□□□ -0.79
DDX42-207ENST00000578593 ARAP1Q96P48 1450 aa10.12□□□□□ -0.79
DDX42-207ENST00000578593 MAPKBP1O60336 1514 aa10.12□□□□□ -0.79
DDX42-207ENST00000578593 WDR97A6NE52 1622 aa10.12□□□□□ -0.79
DDX42-207ENST00000578593 CCER2I3L3R5 266 aa10.11□□□□□ -0.79
DDX42-207ENST00000578593 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.11□□□□□ -0.79
DDX42-207ENST00000578593 CANXP27824 592 aaKnown RBP10.11□□□□□ -0.79
DDX42-207ENST00000578593 RGS3P49796 1198 aa10.11□□□□□ -0.79
DDX42-207ENST00000578593 CALD1Q05682 793 aaKnown RBP10.11□□□□□ -0.79
DDX42-207ENST00000578593 TOP2BQ02880 1626 aa10.11□□□□□ -0.79
DDX42-207ENST00000578593 CHRM1P11229 460 aaPredicted RBP10.1□□□□□ -0.79
DDX42-207ENST00000578593 TEX2Q8IWB9 1127 aa10.1□□□□□ -0.79
DDX42-207ENST00000578593 BIVM-ERCC5R4GMW8 1640 aa10.1□□□□□ -0.79
DDX42-207ENST00000578593 NESP48681 1621 aa10.1□□□□□ -0.79
DDX42-207ENST00000578593 SECISBP2LQ93073 1101 aaKnown RBP10.1□□□□□ -0.79
DDX42-207ENST00000578593 HIRIP3Q9BW71 556 aaPredicted RBP10.09□□□□□ -0.79
DDX42-207ENST00000578593 ANP32CO43423 234 aa10.09□□□□□ -0.79
DDX42-207ENST00000578593 FOXD1Q16676 465 aa10.08□□□□□ -0.8
DDX42-207ENST00000578593 FTSJ3Q8IY81 847 aaKnown RBP10.08□□□□□ -0.8
DDX42-207ENST00000578593 RAB3GAP2Q9H2M9 1393 aa10.08□□□□□ -0.8
DDX42-207ENST00000578593 CCNB3Q8WWL7 1395 aa10.07□□□□□ -0.8
DDX42-207ENST00000578593 NCAPD3P42695 1498 aa10.07□□□□□ -0.8
DDX42-207ENST00000578593 HSP90AA1P07900 732 aaKnown RBP10.06□□□□□ -0.8
DDX42-207ENST00000578593 ERICH3Q5RHP9 1530 aa10.06□□□□□ -0.8
DDX42-207ENST00000578593 NEFMP07197 916 aa10.06□□□□□ -0.8
DDX42-207ENST00000578593 HSP90B1P14625 803 aaKnown RBP10.06□□□□□ -0.8
DDX42-207ENST00000578593 PRXQ9BXM0 1461 aa10.05□□□□□ -0.8
DDX42-207ENST00000578593 ATAD2BQ9ULI0 1458 aa10.05□□□□□ -0.8
DDX42-207ENST00000578593 SIN3AQ96ST3 1273 aa10.05□□□□□ -0.8
DDX42-207ENST00000578593 CNGB1Q14028 1251 aaPredicted RBP10.05□□□□□ -0.8
DDX42-207ENST00000578593 USP35Q9P2H5 1018 aa10.05□□□□□ -0.8
DDX42-207ENST00000578593 FBXO3Q9UK99 471 aa10.05□□□□□ -0.8
DDX42-207ENST00000578593 CDK11BP21127 795 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms