RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 SNAPC4Q5SXM2 1469 aa14.5□□□□□ -0.09
PPP4R1-210ENST00000578557 IGF1RP08069 1367 aa14.46□□□□□ -0.1
PPP4R1-210ENST00000578557 ABCA5Q8WWZ7 1642 aa14.44□□□□□ -0.1
PPP4R1-210ENST00000578557 DCAF8L1A6NGE4 600 aa14.43□□□□□ -0.1
PPP4R1-210ENST00000578557 GRIN2AQ12879 1464 aa14.38□□□□□ -0.11
PPP4R1-210ENST00000578557 CARMIL1Q5VZK9 1371 aa14.37□□□□□ -0.11
PPP4R1-210ENST00000578557 NUP160Q12769 1436 aa14.37□□□□□ -0.11
PPP4R1-210ENST00000578557 JPH4Q96JJ6 628 aa14.34□□□□□ -0.11
PPP4R1-210ENST00000578557 SLC4A1APQ9BWU0 796 aaKnown RBP14.34□□□□□ -0.11
PPP4R1-210ENST00000578557 EEA1Q15075 1411 aa14.33□□□□□ -0.11
PPP4R1-210ENST00000578557 ARHGEF11O15085 1522 aa14.31□□□□□ -0.12
PPP4R1-210ENST00000578557 ADAMTS12P58397 1594 aa14.3□□□□□ -0.12
PPP4R1-210ENST00000578557 CYB5RLQ6IPT4 315 aa14.3□□□□□ -0.12
PPP4R1-210ENST00000578557 CLASP1Q7Z460 1538 aa14.3□□□□□ -0.12
PPP4R1-210ENST00000578557 PBRM1Q86U86 1689 aa14.3□□□□□ -0.12
PPP4R1-210ENST00000578557 CSRNP3Q8WYN3 585 aa14.29□□□□□ -0.12
PPP4R1-210ENST00000578557 FAM9AQ8IZU1 332 aaPredicted RBP14.28□□□□□ -0.12
PPP4R1-210ENST00000578557 KIAA0586Q9BVV6 1533 aa14.28□□□□□ -0.12
PPP4R1-210ENST00000578557 CUL7Q14999 1698 aa14.26□□□□□ -0.13
PPP4R1-210ENST00000578557 RAPGEF2Q9Y4G8 1499 aa14.25□□□□□ -0.13
PPP4R1-210ENST00000578557 CHD1O14646 1710 aa14.25□□□□□ -0.13
PPP4R1-210ENST00000578557 CARMIL2Q6F5E8 1435 aa14.21□□□□□ -0.13
PPP4R1-210ENST00000578557 RIMBP3CA6NJZ7 1639 aa14.2□□□□□ -0.14
PPP4R1-210ENST00000578557 RIMBP3BA6NNM3 1639 aa14.2□□□□□ -0.14
PPP4R1-210ENST00000578557 RIMBP3Q9UFD9 1639 aa14.2□□□□□ -0.14
PPP4R1-210ENST00000578557 PRG4Q92954 1404 aaPredicted RBP14.2□□□□□ -0.14
PPP4R1-210ENST00000578557 PRXQ9BXM0 1461 aa14.18□□□□□ -0.14
PPP4R1-210ENST00000578557 CEP170Q5SW79 1584 aa14.17□□□□□ -0.14
PPP4R1-210ENST00000578557 NPM1P06748 294 aaKnown RBP eCLIP14.17□□□□□ -0.14
PPP4R1-210ENST00000578557 ARAP1Q96P48 1450 aa14.17□□□□□ -0.14
PPP4R1-210ENST00000578557 SHROOM2Q13796 1616 aa14.12□□□□□ -0.15
PPP4R1-210ENST00000578557 TNIKQ9UKE5 1360 aa14.12□□□□□ -0.15
PPP4R1-210ENST00000578557 RUSC2Q8N2Y8 1516 aa14.12□□□□□ -0.15
PPP4R1-210ENST00000578557 PTPRGP23470 1445 aa14.1□□□□□ -0.15
PPP4R1-210ENST00000578557 GOLGA3Q08378 1498 aa14.09□□□□□ -0.15
PPP4R1-210ENST00000578557 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.06□□□□□ -0.162e-6■■□□□ 14.1
PPP4R1-210ENST00000578557 IQGAP2Q13576 1575 aa14.05□□□□□ -0.16
PPP4R1-210ENST00000578557 UGGT2Q9NYU1 1516 aa14.05□□□□□ -0.16
PPP4R1-210ENST00000578557 TRHP20396 242 aaPredicted RBP14.04□□□□□ -0.16
PPP4R1-210ENST00000578557 SLC4A2P04920 1241 aa14.03□□□□□ -0.16
PPP4R1-210ENST00000578557 UBTFP17480 764 aaKnown RBP13.99□□□□□ -0.17
PPP4R1-210ENST00000578557 UACAQ9BZF9 1416 aa13.98□□□□□ -0.17
PPP4R1-210ENST00000578557 UHRF1BP1LA0JNW5 1464 aa13.98□□□□□ -0.17
PPP4R1-210ENST00000578557 DISP1Q96F81 1524 aa13.97□□□□□ -0.17
PPP4R1-210ENST00000578557 ERCC6L2Q5T890 1561 aa13.96□□□□□ -0.18
PPP4R1-210ENST00000578557 KIF21BO75037 1637 aa13.92□□□□□ -0.18
PPP4R1-210ENST00000578557 ABCC2Q92887 1545 aa13.91□□□□□ -0.18
PPP4R1-210ENST00000578557 RNF39Q9H2S5 420 aa13.91□□□□□ -0.18
PPP4R1-210ENST00000578557 FOXD4L1Q9NU39 408 aa13.9□□□□□ -0.18
PPP4R1-210ENST00000578557 PLB1Q6P1J6 1458 aa13.9□□□□□ -0.18
PPP4R1-210ENST00000578557 MAPKBP1O60336 1514 aa13.89□□□□□ -0.19
PPP4R1-210ENST00000578557 FAM69CQ0P6D2 419 aa13.88□□□□□ -0.19
PPP4R1-210ENST00000578557 TTBK1Q5TCY1 1321 aaPredicted RBP13.88□□□□□ -0.19
PPP4R1-210ENST00000578557 KIAA0556O60303 1618 aa13.87□□□□□ -0.19
PPP4R1-210ENST00000578557 KDM5BQ9UGL1 1544 aa13.86□□□□□ -0.19
PPP4R1-210ENST00000578557 ABCC10Q5T3U5 1492 aa13.86□□□□□ -0.19
PPP4R1-210ENST00000578557 EFCAB5A4FU69 1503 aa13.85□□□□□ -0.19
PPP4R1-210ENST00000578557 ZBTB22O15209 634 aa13.84□□□□□ -0.19
PPP4R1-210ENST00000578557 FMN1Q68DA7 1419 aa13.83□□□□□ -0.2
PPP4R1-210ENST00000578557 P3H3Q8IVL6 736 aa13.83□□□□□ -0.2
PPP4R1-210ENST00000578557 CDK11AQ9UQ88 783 aaPredicted RBP13.83□□□□□ -0.2
PPP4R1-210ENST00000578557 U3KPZ7 1027 aaPredicted RBP13.83□□□□□ -0.2
PPP4R1-210ENST00000578557 CTTNBP2Q8WZ74 1663 aa13.82□□□□□ -0.2
PPP4R1-210ENST00000578557 EHMT2Q96KQ7 1210 aa13.82□□□□□ -0.2
PPP4R1-210ENST00000578557 PLEKHD1A6NEE1 506 aa13.81□□□□□ -0.2
PPP4R1-210ENST00000578557 ASXL2Q76L83 1435 aa13.8□□□□□ -0.2
PPP4R1-210ENST00000578557 ADCY10Q96PN6 1610 aa13.79□□□□□ -0.2
PPP4R1-210ENST00000578557 SAMD9Q5K651 1589 aa13.78□□□□□ -0.2
PPP4R1-210ENST00000578557 RANGAP1P46060 587 aaPredicted RBP13.77□□□□□ -0.21
PPP4R1-210ENST00000578557 ABCA8O94911 1581 aa13.76□□□□□ -0.21
PPP4R1-210ENST00000578557 PHLDB1Q86UU1 1377 aa13.76□□□□□ -0.21
PPP4R1-210ENST00000578557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.76□□□□□ -0.21
PPP4R1-210ENST00000578557 C1QBPQ07021 282 aaKnown RBP13.76□□□□□ -0.21
PPP4R1-210ENST00000578557 HNRNPUL2Q1KMD3 747 aaKnown RBP13.76□□□□□ -0.21
PPP4R1-210ENST00000578557 MYCNP04198 464 aaPredicted RBP13.75□□□□□ -0.21
PPP4R1-210ENST00000578557 WDR7Q9Y4E6 1490 aa13.74□□□□□ -0.21
PPP4R1-210ENST00000578557 GLI2P10070 1586 aa13.73□□□□□ -0.21
PPP4R1-210ENST00000578557 ATP10BO94823 1461 aa13.73□□□□□ -0.21
PPP4R1-210ENST00000578557 FHOD3Q2V2M9 1422 aa13.73□□□□□ -0.21
PPP4R1-210ENST00000578557 EPRSP07814 1512 aaKnown RBP13.71□□□□□ -0.21
PPP4R1-210ENST00000578557 KCNH8Q96L42 1107 aa13.71□□□□□ -0.21
PPP4R1-210ENST00000578557 TEX14Q8IWB6 1497 aa13.7□□□□□ -0.22
PPP4R1-210ENST00000578557 ARHGAP35Q9NRY4 1499 aa13.7□□□□□ -0.22
PPP4R1-210ENST00000578557 CLIP1P30622 1438 aa13.69□□□□□ -0.22
PPP4R1-210ENST00000578557 CD109Q6YHK3 1445 aa13.67□□□□□ -0.22
PPP4R1-210ENST00000578557 DIP2BQ9P265 1576 aa13.66□□□□□ -0.22
PPP4R1-210ENST00000578557 ATP1B4Q9UN42 357 aaPredicted RBP13.66□□□□□ -0.22
PPP4R1-210ENST00000578557 NUP153P49790 1475 aaKnown RBP13.66□□□□□ -0.22
PPP4R1-210ENST00000578557 RAPGEF6Q8TEU7 1601 aa13.65□□□□□ -0.22
PPP4R1-210ENST00000578557 CASKIN1Q8WXD9 1431 aa13.64□□□□□ -0.23
PPP4R1-210ENST00000578557 MAGI3Q5TCQ9 1506 aa13.64□□□□□ -0.23
PPP4R1-210ENST00000578557 ZCCHC11Q5TAX3 1644 aaKnown RBP13.63□□□□□ -0.23
PPP4R1-210ENST00000578557 SAMD1Q6SPF0 538 aaPredicted RBP13.62□□□□□ -0.23
PPP4R1-210ENST00000578557 CCDC18Q5T9S5 1454 aa13.61□□□□□ -0.23
PPP4R1-210ENST00000578557 ARID3CA6NKF2 412 aa13.59□□□□□ -0.23
PPP4R1-210ENST00000578557 CEP162Q5TB80 1403 aa13.57□□□□□ -0.24
PPP4R1-210ENST00000578557 FYCO1Q9BQS8 1478 aa13.57□□□□□ -0.24
PPP4R1-210ENST00000578557 CACNB1Q02641 598 aaPredicted RBP13.57□□□□□ -0.24
PPP4R1-210ENST00000578557 EFCAB2Q5VUJ9 269 aa13.57□□□□□ -0.24
PPP4R1-210ENST00000578557 HECW1Q76N89 1606 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms