RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 SHROOM2Q13796 1616 aa36.43■■■■□ 3.42
CDC42EP4-203ENST00000578516 PRXQ9BXM0 1461 aa36.39■■■■□ 3.42
CDC42EP4-203ENST00000578516 EEA1Q15075 1411 aa36.34■■■■□ 3.41
CDC42EP4-203ENST00000578516 ARAP1Q96P48 1450 aa36.34■■■■□ 3.41
CDC42EP4-203ENST00000578516 CSRNP3Q8WYN3 585 aa36.31■■■■□ 3.4
CDC42EP4-203ENST00000578516 KIAA0586Q9BVV6 1533 aa36.29■■■■□ 3.4
CDC42EP4-203ENST00000578516 CTTNBP2Q8WZ74 1663 aa36.29■■■■□ 3.4
CDC42EP4-203ENST00000578516 IQGAP2Q13576 1575 aa36.23■■■■□ 3.39
CDC42EP4-203ENST00000578516 PRG4Q92954 1404 aaPredicted RBP36.2■■■■□ 3.39
CDC42EP4-203ENST00000578516 JPH4Q96JJ6 628 aa36.18■■■■□ 3.38
CDC42EP4-203ENST00000578516 KIF21BO75037 1637 aa36.16■■■■□ 3.38
CDC42EP4-203ENST00000578516 CYB5RLQ6IPT4 315 aa36.13■■■■□ 3.37
CDC42EP4-203ENST00000578516 EHMT2Q96KQ7 1210 aa36.08■■■■□ 3.37
CDC42EP4-203ENST00000578516 UGGT2Q9NYU1 1516 aa36■■■■□ 3.35
CDC42EP4-203ENST00000578516 DISP1Q96F81 1524 aa35.97■■■■□ 3.35
CDC42EP4-203ENST00000578516 KIAA0556O60303 1618 aa35.94■■■■□ 3.34
CDC42EP4-203ENST00000578516 GOLGA3Q08378 1498 aa35.89■■■■□ 3.34
CDC42EP4-203ENST00000578516 TTBK1Q5TCY1 1321 aaPredicted RBP35.85■■■■□ 3.33
CDC42EP4-203ENST00000578516 CARMIL2Q6F5E8 1435 aa35.84■■■■□ 3.33
CDC42EP4-203ENST00000578516 RANGAP1P46060 587 aaPredicted RBP35.77■■■■□ 3.32
CDC42EP4-203ENST00000578516 TNIKQ9UKE5 1360 aa35.76■■■■□ 3.31
CDC42EP4-203ENST00000578516 ADCY10Q96PN6 1610 aa35.75■■■■□ 3.31
CDC42EP4-203ENST00000578516 SAMD9Q5K651 1589 aa35.75■■■■□ 3.31
CDC42EP4-203ENST00000578516 UBTFP17480 764 aaKnown RBP35.72■■■■□ 3.31
CDC42EP4-203ENST00000578516 PTPRGP23470 1445 aa35.72■■■■□ 3.31
CDC42EP4-203ENST00000578516 P3H3Q8IVL6 736 aa35.67■■■■□ 3.3
CDC42EP4-203ENST00000578516 FHOD3Q2V2M9 1422 aa35.57■■■■□ 3.28
CDC42EP4-203ENST00000578516 PLB1Q6P1J6 1458 aa35.54■■■■□ 3.28
CDC42EP4-203ENST00000578516 EFCAB5A4FU69 1503 aa35.52■■■■□ 3.28
CDC42EP4-203ENST00000578516 ABCC2Q92887 1545 aa35.52■■■■□ 3.28
CDC42EP4-203ENST00000578516 UACAQ9BZF9 1416 aa35.51■■■■□ 3.28
CDC42EP4-203ENST00000578516 ABCA8O94911 1581 aa35.51■■■■□ 3.27
CDC42EP4-203ENST00000578516 ARHGAP35Q9NRY4 1499 aa35.47■■■■□ 3.27
CDC42EP4-203ENST00000578516 UHRF1BP1LA0JNW5 1464 aa35.45■■■■□ 3.27
CDC42EP4-203ENST00000578516 ZCCHC11Q5TAX3 1644 aaKnown RBP35.42■■■■□ 3.26
CDC42EP4-203ENST00000578516 LOC105371045A0A1W2PR82 267 aa35.39■■■■□ 3.26
CDC42EP4-203ENST00000578516 RAPGEF6Q8TEU7 1601 aa35.38■■■■□ 3.25
CDC42EP4-203ENST00000578516 MAPKBP1O60336 1514 aa35.34■■■■□ 3.25
CDC42EP4-203ENST00000578516 KIF13AQ9H1H9 1805 aa35.34■■■■□ 3.25
CDC42EP4-203ENST00000578516 KDM5BQ9UGL1 1544 aa35.32■■■■□ 3.25
CDC42EP4-203ENST00000578516 TRHP20396 242 aaPredicted RBP35.32■■■■□ 3.24
CDC42EP4-203ENST00000578516 ARID3CA6NKF2 412 aa35.3■■■■□ 3.24
CDC42EP4-203ENST00000578516 NPM1P06748 294 aaKnown RBP eCLIP35.29■■■■□ 3.24
CDC42EP4-203ENST00000578516 CLIP1P30622 1438 aa35.25■■■■□ 3.23
CDC42EP4-203ENST00000578516 DIP2BQ9P265 1576 aa35.22■■■■□ 3.23
CDC42EP4-203ENST00000578516 NUP153P49790 1475 aaKnown RBP35.22■■■■□ 3.23
CDC42EP4-203ENST00000578516 ASXL2Q76L83 1435 aa35.21■■■■□ 3.23
CDC42EP4-203ENST00000578516 CEP162Q5TB80 1403 aa35.19■■■■□ 3.22
CDC42EP4-203ENST00000578516 ATP10BO94823 1461 aa35.16■■■■□ 3.22
CDC42EP4-203ENST00000578516 PCF11O94913 1555 aaKnown RBP35.15■■■■□ 3.22
CDC42EP4-203ENST00000578516 LRRIQ1Q96JM4 1722 aa35.15■■■■□ 3.22
CDC42EP4-203ENST00000578516 ABCC10Q5T3U5 1492 aa35.14■■■■□ 3.22
CDC42EP4-203ENST00000578516 FMN1Q68DA7 1419 aa35.11■■■■□ 3.21
CDC42EP4-203ENST00000578516 CDK13Q14004 1512 aaKnown RBP35.09■■■■□ 3.21
CDC42EP4-203ENST00000578516 HECW1Q76N89 1606 aa35.08■■■■□ 3.21
CDC42EP4-203ENST00000578516 TSPOAP1O95153 1857 aa35.06■■■■□ 3.2
CDC42EP4-203ENST00000578516 WDR7Q9Y4E6 1490 aa35.05■■■■□ 3.2
CDC42EP4-203ENST00000578516 FAM69CQ0P6D2 419 aa35.03■■■■□ 3.2
CDC42EP4-203ENST00000578516 EPRSP07814 1512 aaKnown RBP35.01■■■■□ 3.2
CDC42EP4-203ENST00000578516 ATP1B4Q9UN42 357 aaPredicted RBP35■■■■□ 3.19
CDC42EP4-203ENST00000578516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.95■■■■□ 3.19
CDC42EP4-203ENST00000578516 HNRNPUL2Q1KMD3 747 aaKnown RBP34.95■■■■□ 3.19
CDC42EP4-203ENST00000578516 GLI2P10070 1586 aa34.95■■■■□ 3.18
CDC42EP4-203ENST00000578516 PPRC1Q5VV67 1664 aaKnown RBP34.92■■■■□ 3.18
CDC42EP4-203ENST00000578516 CASKIN1Q8WXD9 1431 aa34.92■■■■□ 3.18
CDC42EP4-203ENST00000578516 MAP3K4Q9Y6R4 1608 aa34.91■■■■□ 3.18
CDC42EP4-203ENST00000578516 KCNH8Q96L42 1107 aa34.88■■■■□ 3.17
CDC42EP4-203ENST00000578516 FYCO1Q9BQS8 1478 aa34.88■■■■□ 3.17
CDC42EP4-203ENST00000578516 CFAP43Q8NDM7 1665 aa34.81■■■■□ 3.16
CDC42EP4-203ENST00000578516 ABCA9Q8IUA7 1624 aa34.77■■■■□ 3.16
CDC42EP4-203ENST00000578516 MAGI3Q5TCQ9 1506 aa34.76■■■■□ 3.16
CDC42EP4-203ENST00000578516 KIF14Q15058 1648 aa34.75■■■■□ 3.15
CDC42EP4-203ENST00000578516 CCDC18Q5T9S5 1454 aa34.74■■■■□ 3.15
CDC42EP4-203ENST00000578516 TTC37Q6PGP7 1564 aa34.73■■■■□ 3.15
CDC42EP4-203ENST00000578516 PLEKHD1A6NEE1 506 aa34.7■■■■□ 3.15
CDC42EP4-203ENST00000578516 VPS8Q8N3P4 1428 aa34.7■■■■□ 3.15
CDC42EP4-203ENST00000578516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.69■■■■□ 3.14
CDC42EP4-203ENST00000578516 CD109Q6YHK3 1445 aa34.66■■■■□ 3.14
CDC42EP4-203ENST00000578516 TROQ12816 1431 aaPredicted RBP34.64■■■■□ 3.14
CDC42EP4-203ENST00000578516 KDM6BO15054 1643 aa34.59■■■■□ 3.13
CDC42EP4-203ENST00000578516 TEX14Q8IWB6 1497 aa34.54■■■■□ 3.12
CDC42EP4-203ENST00000578516 TIAM1Q13009 1591 aa34.53■■■■□ 3.12
CDC42EP4-203ENST00000578516 MYO5CQ9NQX4 1742 aa34.53■■■■□ 3.12
CDC42EP4-203ENST00000578516 CDK11AQ9UQ88 783 aaPredicted RBP34.53■■■■□ 3.12
CDC42EP4-203ENST00000578516 COL17A1Q9UMD9 1497 aaPredicted RBP34.49■■■■□ 3.11
CDC42EP4-203ENST00000578516 EHBP1L1Q8N3D4 1523 aa34.45■■■■□ 3.1
CDC42EP4-203ENST00000578516 CDC42BPAQ5VT25 1732 aa34.44■■■■□ 3.1
CDC42EP4-203ENST00000578516 CDC42BPBQ9Y5S2 1711 aa34.42■■■■□ 3.1
CDC42EP4-203ENST00000578516 MTUS2Q5JR59 1369 aa34.42■■■■□ 3.1
CDC42EP4-203ENST00000578516 PREX2Q70Z35 1606 aa34.4■■■■□ 3.1
CDC42EP4-203ENST00000578516 FANCAO15360 1455 aa34.37■■■■□ 3.09
CDC42EP4-203ENST00000578516 CFAP74Q9C0B2 1584 aa34.36■■■■□ 3.09
CDC42EP4-203ENST00000578516 PLCH2O75038 1416 aa34.35■■■■□ 3.09
CDC42EP4-203ENST00000578516 NEO1Q92859 1461 aa34.33■■■■□ 3.09
CDC42EP4-203ENST00000578516 ARHGAP5Q13017 1502 aa34.32■■■■□ 3.08
CDC42EP4-203ENST00000578516 LRRC9Q6ZRR7 1453 aa34.31■■■■□ 3.08
CDC42EP4-203ENST00000578516 SUPT6HQ7KZ85 1726 aaKnown RBP34.3■■■■□ 3.08
CDC42EP4-203ENST00000578516 FRMPD1Q5SYB0 1578 aa34.3■■■■□ 3.08
CDC42EP4-203ENST00000578516 KANK4Q5T7N3 995 aaPredicted RBP34.29■■■■□ 3.08
CDC42EP4-203ENST00000578516 MAP3K1Q13233 1512 aa34.29■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms