RNA–Protein interactions for RNA: ENST00000577335.1

SCO1-202, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3

Gene SCO1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-202ENST00000577335 CSRNP3Q8WYN3 585 aa32.72■■■□□ 2.83
SCO1-202ENST00000577335 PRXQ9BXM0 1461 aa32.7■■■□□ 2.83
SCO1-202ENST00000577335 JPH4Q96JJ6 628 aa32.7■■■□□ 2.83
SCO1-202ENST00000577335 SHROOM2Q13796 1616 aa32.69■■■□□ 2.82
SCO1-202ENST00000577335 ARAP1Q96P48 1450 aa32.65■■■□□ 2.82
SCO1-202ENST00000577335 CYB5RLQ6IPT4 315 aa32.62■■■□□ 2.81
SCO1-202ENST00000577335 PRG4Q92954 1404 aaPredicted RBP32.59■■■□□ 2.81
SCO1-202ENST00000577335 ERCC6L2Q5T890 1561 aa32.51■■■□□ 2.79
SCO1-202ENST00000577335 IQGAP2Q13576 1575 aa32.5■■■□□ 2.79
SCO1-202ENST00000577335 FAM9AQ8IZU1 332 aaPredicted RBP32.5■■■□□ 2.79
SCO1-202ENST00000577335 CARMIL2Q6F5E8 1435 aa32.42■■■□□ 2.78
SCO1-202ENST00000577335 UGGT2Q9NYU1 1516 aa32.38■■■□□ 2.77
SCO1-202ENST00000577335 KIF21BO75037 1637 aa32.36■■■□□ 2.77
SCO1-202ENST00000577335 CTTNBP2Q8WZ74 1663 aa32.34■■■□□ 2.77
SCO1-202ENST00000577335 DISP1Q96F81 1524 aa32.28■■■□□ 2.76
SCO1-202ENST00000577335 TNIKQ9UKE5 1360 aa32.28■■■□□ 2.76
SCO1-202ENST00000577335 GOLGA3Q08378 1498 aa32.25■■■□□ 2.75
SCO1-202ENST00000577335 PTPRGP23470 1445 aa32.25■■■□□ 2.75
SCO1-202ENST00000577335 KIAA0556O60303 1618 aa32.18■■■□□ 2.74
SCO1-202ENST00000577335 UBTFP17480 764 aaKnown RBP32.11■■■□□ 2.73
SCO1-202ENST00000577335 NPM1P06748 294 aaKnown RBP eCLIP32.05■■■□□ 2.72
SCO1-202ENST00000577335 TTBK1Q5TCY1 1321 aaPredicted RBP32.04■■■□□ 2.72
SCO1-202ENST00000577335 UACAQ9BZF9 1416 aa32.03■■■□□ 2.72
SCO1-202ENST00000577335 UHRF1BP1LA0JNW5 1464 aa32.02■■■□□ 2.72
SCO1-202ENST00000577335 ADCY10Q96PN6 1610 aa32.01■■■□□ 2.72
SCO1-202ENST00000577335 SAMD9Q5K651 1589 aa32.01■■■□□ 2.71
SCO1-202ENST00000577335 EHMT2Q96KQ7 1210 aa31.99■■■□□ 2.71
SCO1-202ENST00000577335 EFCAB5A4FU69 1503 aa31.95■■■□□ 2.7
SCO1-202ENST00000577335 ABCC2Q92887 1545 aa31.94■■■□□ 2.7
SCO1-202ENST00000577335 P3H3Q8IVL6 736 aa31.93■■■□□ 2.7
SCO1-202ENST00000577335 TRHP20396 242 aaPredicted RBP31.92■■■□□ 2.7
SCO1-202ENST00000577335 RANGAP1P46060 587 aaPredicted RBP31.9■■■□□ 2.7
SCO1-202ENST00000577335 MAPKBP1O60336 1514 aa31.88■■■□□ 2.69
SCO1-202ENST00000577335 PLB1Q6P1J6 1458 aa31.86■■■□□ 2.69
SCO1-202ENST00000577335 ABCA8O94911 1581 aa31.85■■■□□ 2.69
SCO1-202ENST00000577335 KDM5BQ9UGL1 1544 aa31.84■■■□□ 2.69
SCO1-202ENST00000577335 FHOD3Q2V2M9 1422 aa31.81■■■□□ 2.68
SCO1-202ENST00000577335 ARHGAP35Q9NRY4 1499 aa31.75■■■□□ 2.67
SCO1-202ENST00000577335 ABCC10Q5T3U5 1492 aa31.72■■■□□ 2.67
SCO1-202ENST00000577335 ASXL2Q76L83 1435 aa31.7■■■□□ 2.67
SCO1-202ENST00000577335 FMN1Q68DA7 1419 aa31.68■■■□□ 2.66
SCO1-202ENST00000577335 ZCCHC11Q5TAX3 1644 aaKnown RBP31.67■■■□□ 2.66
SCO1-202ENST00000577335 RAPGEF6Q8TEU7 1601 aa31.67■■■□□ 2.66
SCO1-202ENST00000577335 FAM69CQ0P6D2 419 aa31.64■■■□□ 2.66
SCO1-202ENST00000577335 CLIP1P30622 1438 aa31.62■■■□□ 2.65
SCO1-202ENST00000577335 DIP2BQ9P265 1576 aa31.6■■■□□ 2.65
SCO1-202ENST00000577335 ATP10BO94823 1461 aa31.6■■■□□ 2.65
SCO1-202ENST00000577335 NUP153P49790 1475 aaKnown RBP31.59■■■□□ 2.65
SCO1-202ENST00000577335 WDR7Q9Y4E6 1490 aa31.57■■■□□ 2.64
SCO1-202ENST00000577335 KIF13AQ9H1H9 1805 aa31.54■■■□□ 2.64
SCO1-202ENST00000577335 LOC105371045A0A1W2PR82 267 aa31.53■■■□□ 2.64
SCO1-202ENST00000577335 GLI2P10070 1586 aa31.52■■■□□ 2.64
SCO1-202ENST00000577335 EPRSP07814 1512 aaKnown RBP31.51■■■□□ 2.63
SCO1-202ENST00000577335 ARID3CA6NKF2 412 aa31.5■■■□□ 2.63
SCO1-202ENST00000577335 CEP162Q5TB80 1403 aa31.49■■■□□ 2.63
SCO1-202ENST00000577335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.48■■■□□ 2.63
SCO1-202ENST00000577335 HNRNPUL2Q1KMD3 747 aaKnown RBP31.48■■■□□ 2.63
SCO1-202ENST00000577335 HECW1Q76N89 1606 aa31.44■■■□□ 2.62
SCO1-202ENST00000577335 CASKIN1Q8WXD9 1431 aa31.41■■■□□ 2.62
SCO1-202ENST00000577335 PLEKHD1A6NEE1 506 aa31.4■■■□□ 2.62
SCO1-202ENST00000577335 ATP1B4Q9UN42 357 aaPredicted RBP31.4■■■□□ 2.62
SCO1-202ENST00000577335 KCNH8Q96L42 1107 aa31.39■■■□□ 2.62
SCO1-202ENST00000577335 CDK11AQ9UQ88 783 aaPredicted RBP31.34■■■□□ 2.61
SCO1-202ENST00000577335 FYCO1Q9BQS8 1478 aa31.33■■■□□ 2.61
SCO1-202ENST00000577335 CDK13Q14004 1512 aaKnown RBP31.32■■■□□ 2.6
SCO1-202ENST00000577335 MAP3K4Q9Y6R4 1608 aa31.31■■■□□ 2.6
SCO1-202ENST00000577335 PCF11O94913 1555 aaKnown RBP31.3■■■□□ 2.6
SCO1-202ENST00000577335 CCDC18Q5T9S5 1454 aa31.29■■■□□ 2.6
SCO1-202ENST00000577335 CD109Q6YHK3 1445 aa31.27■■■□□ 2.6
SCO1-202ENST00000577335 TEX14Q8IWB6 1497 aa31.26■■■□□ 2.59
SCO1-202ENST00000577335 CFAP43Q8NDM7 1665 aa31.25■■■□□ 2.59
SCO1-202ENST00000577335 MAGI3Q5TCQ9 1506 aa31.24■■■□□ 2.59
SCO1-202ENST00000577335 ABCA9Q8IUA7 1624 aa31.21■■■□□ 2.59
SCO1-202ENST00000577335 TSPOAP1O95153 1857 aa31.19■■■□□ 2.58
SCO1-202ENST00000577335 PPRC1Q5VV67 1664 aaKnown RBP31.18■■■□□ 2.58
SCO1-202ENST00000577335 TROQ12816 1431 aaPredicted RBP31.16■■■□□ 2.58
SCO1-202ENST00000577335 VPS8Q8N3P4 1428 aa31.14■■■□□ 2.58
SCO1-202ENST00000577335 LRRIQ1Q96JM4 1722 aa31.12■■■□□ 2.57
SCO1-202ENST00000577335 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.09■■■□□ 2.57
SCO1-202ENST00000577335 PHLDB1Q86UU1 1377 aa31.09■■■□□ 2.57
SCO1-202ENST00000577335 KDM6BO15054 1643 aa31.07■■■□□ 2.56
SCO1-202ENST00000577335 KIF14Q15058 1648 aa31.04■■■□□ 2.56
SCO1-202ENST00000577335 NEO1Q92859 1461 aa31.02■■■□□ 2.56
SCO1-202ENST00000577335 TTC37Q6PGP7 1564 aa31■■■□□ 2.55
SCO1-202ENST00000577335 PLCH2O75038 1416 aa30.98■■■□□ 2.55
SCO1-202ENST00000577335 MTUS2Q5JR59 1369 aa30.97■■■□□ 2.55
SCO1-202ENST00000577335 COL17A1Q9UMD9 1497 aaPredicted RBP30.96■■■□□ 2.55
SCO1-202ENST00000577335 ARAP3Q8WWN8 1544 aa30.96■■■□□ 2.55
SCO1-202ENST00000577335 FANCAO15360 1455 aa30.93■■■□□ 2.54
SCO1-202ENST00000577335 MAP3K1Q13233 1512 aa30.9■■■□□ 2.54
SCO1-202ENST00000577335 EFCAB2Q5VUJ9 269 aa30.9■■■□□ 2.54
SCO1-202ENST00000577335 CFAP74Q9C0B2 1584 aa30.9■■■□□ 2.54
SCO1-202ENST00000577335 EHBP1L1Q8N3D4 1523 aa30.88■■■□□ 2.53
SCO1-202ENST00000577335 AKNAQ7Z591 1439 aa30.87■■■□□ 2.53
SCO1-202ENST00000577335 TIAM1Q13009 1591 aa30.87■■■□□ 2.53
SCO1-202ENST00000577335 MYO5CQ9NQX4 1742 aa30.85■■■□□ 2.53
SCO1-202ENST00000577335 APLP2Q06481 763 aa30.81■■■□□ 2.52
SCO1-202ENST00000577335 ARHGAP5Q13017 1502 aa30.79■■■□□ 2.52
SCO1-202ENST00000577335 DENND4BO75064 1496 aaPredicted RBP30.78■■■□□ 2.52
SCO1-202ENST00000577335 CCNB3Q8WWL7 1395 aa30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms