RNA–Protein interactions for RNA: ENST00000577185.1

TTC39C-204, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3 BASIC

Gene TTC39C, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-204ENST00000577185 PCDH10Q9P2E7 1040 aa13.6□□□□□ -0.23
TTC39C-204ENST00000577185 ZNF579Q8NAF0 562 aaKnown RBP13.59□□□□□ -0.23
TTC39C-204ENST00000577185 DNAJC5Q9H3Z4 198 aa13.55□□□□□ -0.24
TTC39C-204ENST00000577185 ZBTB22O15209 634 aa13.54□□□□□ -0.24
TTC39C-204ENST00000577185 ZRANB1Q9UGI0 708 aa13.51□□□□□ -0.25
TTC39C-204ENST00000577185 NCAPD3P42695 1498 aa13.49□□□□□ -0.25
TTC39C-204ENST00000577185 GALR2O43603 387 aaPredicted RBP13.49□□□□□ -0.25
TTC39C-204ENST00000577185 ATAD2BQ9ULI0 1458 aa13.42□□□□□ -0.26
TTC39C-204ENST00000577185 CUX2O14529 1486 aa13.41□□□□□ -0.26
TTC39C-204ENST00000577185 ERCC6Q03468 1493 aa13.41□□□□□ -0.26
TTC39C-204ENST00000577185 SMARCA2P51531 1590 aa13.37□□□□□ -0.27
TTC39C-204ENST00000577185 SMARCA4P51532 1647 aa13.35□□□□□ -0.27
TTC39C-204ENST00000577185 HMGXB3Q12766 1538 aa13.34□□□□□ -0.27
TTC39C-204ENST00000577185 PELP1Q8IZL8 1130 aaKnown RBP13.32□□□□□ -0.28
TTC39C-204ENST00000577185 BAZ1AQ9NRL2 1556 aaPredicted RBP13.3□□□□□ -0.28
TTC39C-204ENST00000577185 LCE2DQ5TA82 110 aaPredicted RBP13.29□□□□□ -0.28
TTC39C-204ENST00000577185 BAZ1BQ9UIG0 1483 aaKnown RBP13.29□□□□□ -0.28
TTC39C-204ENST00000577185 NESP48681 1621 aa13.27□□□□□ -0.29
TTC39C-204ENST00000577185 CREBZFQ9NS37 354 aa13.25□□□□□ -0.29
TTC39C-204ENST00000577185 POTEJP0CG39 1038 aa13.24□□□□□ -0.29
TTC39C-204ENST00000577185 PHF12Q96QT6 1004 aa13.23□□□□□ -0.29
TTC39C-204ENST00000577185 PEG3Q9GZU2 1588 aa13.23□□□□□ -0.29
TTC39C-204ENST00000577185 MAMSTRQ6ZN01 415 aa13.22□□□□□ -0.29
TTC39C-204ENST00000577185 METRNQ9UJH8 293 aa13.22□□□□□ -0.29
TTC39C-204ENST00000577185 FAM163AQ96GL9 167 aaPredicted RBP13.21□□□□□ -0.29
TTC39C-204ENST00000577185 PAK3O75914 559 aaPredicted RBP13.2□□□□□ -0.3
TTC39C-204ENST00000577185 MROH2BQ7Z745 1585 aa13.18□□□□□ -0.3
TTC39C-204ENST00000577185 LAMC3Q9Y6N6 1575 aa13.17□□□□□ -0.3
TTC39C-204ENST00000577185 C7P10643 843 aa13.16□□□□□ -0.3
TTC39C-204ENST00000577185 SLC39A7Q92504 469 aa13.16□□□□□ -0.3
TTC39C-204ENST00000577185 ASTLQ6HA08 431 aaPredicted RBP13.15□□□□□ -0.3
TTC39C-204ENST00000577185 PDS5BQ9NTI5 1447 aa13.14□□□□□ -0.31
TTC39C-204ENST00000577185 THOC2Q8NI27 1593 aaKnown RBP13.12□□□□□ -0.31
TTC39C-204ENST00000577185 ATMINO43313 823 aaPredicted RBP13.1□□□□□ -0.31
TTC39C-204ENST00000577185 SCUBE2Q9NQ36 999 aa13.09□□□□□ -0.31
TTC39C-204ENST00000577185 CADPSQ9ULU8 1353 aa13.08□□□□□ -0.31
TTC39C-204ENST00000577185 STAG3Q9UJ98 1225 aa13.05□□□□□ -0.32
TTC39C-204ENST00000577185 KIF21AQ7Z4S6 1674 aa13.04□□□□□ -0.32
TTC39C-204ENST00000577185 MS4A3Q96HJ5 214 aa13.03□□□□□ -0.32
TTC39C-204ENST00000577185 CDAN1Q8IWY9 1227 aa13.02□□□□□ -0.33
TTC39C-204ENST00000577185 MRC2Q9UBG0 1479 aa13.01□□□□□ -0.33
TTC39C-204ENST00000577185 WIZO95785 1651 aa12.99□□□□□ -0.33
TTC39C-204ENST00000577185 NPM1P06748 294 aaKnown RBP eCLIP12.98□□□□□ -0.33
TTC39C-204ENST00000577185 WDR62O43379 1518 aa12.95□□□□□ -0.34
TTC39C-204ENST00000577185 CEP164Q9UPV0 1460 aa12.94□□□□□ -0.34
TTC39C-204ENST00000577185 FANCD2Q9BXW9 1451 aa12.91□□□□□ -0.34
TTC39C-204ENST00000577185 ATN1P54259 1190 aaPredicted RBP12.91□□□□□ -0.34
TTC39C-204ENST00000577185 MNX1P50219 401 aaPredicted RBP12.9□□□□□ -0.34
TTC39C-204ENST00000577185 TRIM41Q8WV44 630 aa12.9□□□□□ -0.34
TTC39C-204ENST00000577185 CFTRP13569 1480 aa12.9□□□□□ -0.34
TTC39C-204ENST00000577185 RSF1Q96T23 1441 aaPredicted RBP12.89□□□□□ -0.35
TTC39C-204ENST00000577185 POTEFA5A3E0 1075 aa12.88□□□□□ -0.35
TTC39C-204ENST00000577185 TOP2AP11388 1531 aaKnown RBP12.85□□□□□ -0.35
TTC39C-204ENST00000577185 URB2Q14146 1524 aaKnown RBP12.8□□□□□ -0.36
TTC39C-204ENST00000577185 MMRN1Q13201 1228 aa12.79□□□□□ -0.36
TTC39C-204ENST00000577185 BMP2KQ9NSY1 1161 aaPredicted RBP12.75□□□□□ -0.37
TTC39C-204ENST00000577185 SPNS2Q8IVW8 549 aa12.73□□□□□ -0.37
TTC39C-204ENST00000577185 CCDC88BA6NC98 1476 aa12.72□□□□□ -0.37
TTC39C-204ENST00000577185 ST18O60284 1047 aa12.72□□□□□ -0.37
TTC39C-204ENST00000577185 CCDC61Q9Y6R9 512 aa12.71□□□□□ -0.37
TTC39C-204ENST00000577185 TSPYL2Q9H2G4 693 aaPredicted RBP12.7□□□□□ -0.38
TTC39C-204ENST00000577185 KIF12Q96FN5 646 aa12.69□□□□□ -0.38
TTC39C-204ENST00000577185 COLQQ9Y215 455 aaPredicted RBP12.69□□□□□ -0.38
TTC39C-204ENST00000577185 IFT140Q96RY7 1462 aa12.69□□□□□ -0.38
TTC39C-204ENST00000577185 SEC24BO95487 1268 aa12.67□□□□□ -0.38
TTC39C-204ENST00000577185 TRPC6Q9Y210 931 aa12.67□□□□□ -0.38
TTC39C-204ENST00000577185 TIE1P35590 1138 aa12.66□□□□□ -0.38
TTC39C-204ENST00000577185 ABCC8Q09428 1581 aa12.65□□□□□ -0.38
TTC39C-204ENST00000577185 TOPBP1Q92547 1522 aa12.65□□□□□ -0.38
TTC39C-204ENST00000577185 ZNF608Q9ULD9 1512 aaPredicted RBP12.65□□□□□ -0.38
TTC39C-204ENST00000577185 PRDM2Q13029 1718 aa12.65□□□□□ -0.38
TTC39C-204ENST00000577185 SLAIN1Q8ND83 568 aa12.62□□□□□ -0.39
TTC39C-204ENST00000577185 SPDYE4A6NLX3 237 aa12.6□□□□□ -0.39
TTC39C-204ENST00000577185 DNMBPQ6XZF7 1577 aa12.58□□□□□ -0.4
TTC39C-204ENST00000577185 RIMBP3CA6NJZ7 1639 aa12.58□□□□□ -0.4
TTC39C-204ENST00000577185 RIMBP3BA6NNM3 1639 aa12.58□□□□□ -0.4
TTC39C-204ENST00000577185 RIMBP3Q9UFD9 1639 aa12.58□□□□□ -0.4
TTC39C-204ENST00000577185 TTLL13PA6NNM8 815 aa12.56□□□□□ -0.4
TTC39C-204ENST00000577185 MAP3K13O43283 966 aa12.56□□□□□ -0.4
TTC39C-204ENST00000577185 ARHGEF11O15085 1522 aa12.56□□□□□ -0.4
TTC39C-204ENST00000577185 EIF4G3O43432 1585 aaKnown RBP12.55□□□□□ -0.4
TTC39C-204ENST00000577185 AQRO60306 1485 aaKnown RBP eCLIP12.54□□□□□ -0.4
TTC39C-204ENST00000577185 IER5LQ5T953 404 aa12.54□□□□□ -0.4
TTC39C-204ENST00000577185 CYB5RLQ6IPT4 315 aa12.53□□□□□ -0.4
TTC39C-204ENST00000577185 TMEM121BQ9BXQ6 578 aaPredicted RBP12.52□□□□□ -0.41
TTC39C-204ENST00000577185 POLA1P09884 1462 aaPredicted RBP12.52□□□□□ -0.41
TTC39C-204ENST00000577185 TARBP1Q13395 1621 aaKnown RBP12.51□□□□□ -0.41
TTC39C-204ENST00000577185 SOGA1O94964 1423 aa12.5□□□□□ -0.41
TTC39C-204ENST00000577185 TRIM35Q9UPQ4 493 aa12.48□□□□□ -0.41
TTC39C-204ENST00000577185 RAD54L2Q9Y4B4 1467 aa12.47□□□□□ -0.41
TTC39C-204ENST00000577185 TDRD9Q8NDG6 1382 aaKnown RBP12.47□□□□□ -0.41
TTC39C-204ENST00000577185 CHD1O14646 1710 aa12.44□□□□□ -0.42
TTC39C-204ENST00000577185 CHMP7Q8WUX9 453 aaPredicted RBP12.43□□□□□ -0.42
TTC39C-204ENST00000577185 FGD5Q6ZNL6 1462 aa12.42□□□□□ -0.42
TTC39C-204ENST00000577185 ARAP1Q96P48 1450 aa12.42□□□□□ -0.42
TTC39C-204ENST00000577185 WDR97A6NE52 1622 aa12.4□□□□□ -0.42
TTC39C-204ENST00000577185 SNAPC4Q5SXM2 1469 aa12.4□□□□□ -0.42
TTC39C-204ENST00000577185 MARVELD3Q96A59 401 aa12.4□□□□□ -0.42
TTC39C-204ENST00000577185 GRIN2BQ13224 1484 aa12.39□□□□□ -0.43
TTC39C-204ENST00000577185 CUX1P39880 1505 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms